RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 CCDC174Q6PII3 467 aa12.95□□□□□ -0.34
TRAF4-206ENST00000454852 CHST13Q8NET6 341 aa12.95□□□□□ -0.34
TRAF4-206ENST00000454852 SMCR8Q8TEV9 937 aaPredicted RBP12.95□□□□□ -0.34
TRAF4-206ENST00000454852 GPKOWQ92917 476 aaPredicted RBP eCLIP12.95□□□□□ -0.34
TRAF4-206ENST00000454852 COA7Q96BR5 231 aa12.95□□□□□ -0.34
TRAF4-206ENST00000454852 AGBL1Q96MI9 1066 aa12.95□□□□□ -0.34
TRAF4-206ENST00000454852 SPATC1LQ9H0A9 340 aa12.95□□□□□ -0.34
TRAF4-206ENST00000454852 RAVER2Q9HCJ3 691 aaKnown RBP12.95□□□□□ -0.34
TRAF4-206ENST00000454852 TXNRD2Q9NNW7 524 aa12.95□□□□□ -0.34
TRAF4-206ENST00000454852 RIC8AQ9NPQ8 531 aa12.95□□□□□ -0.34
TRAF4-206ENST00000454852 VPS54Q9P1Q0 977 aa12.95□□□□□ -0.34
TRAF4-206ENST00000454852 CCPG1Q9ULG6 757 aa12.95□□□□□ -0.34
TRAF4-206ENST00000454852 MTMR6Q9Y217 621 aa12.95□□□□□ -0.34
TRAF4-206ENST00000454852 CTDP1Q9Y5B0 961 aaPredicted RBP12.95□□□□□ -0.34
TRAF4-206ENST00000454852 RBBP6Q7Z6E9 1792 aaKnown RBP12.94□□□□□ -0.34
TRAF4-206ENST00000454852 M0R2N6 131 aa12.94□□□□□ -0.34
TRAF4-206ENST00000454852 OPLAHO14841 1288 aa12.94□□□□□ -0.34
TRAF4-206ENST00000454852 DTNBO60941 627 aa12.94□□□□□ -0.34
TRAF4-206ENST00000454852 BRD1O95696 1058 aa12.94□□□□□ -0.34
TRAF4-206ENST00000454852 NAPAP54920 295 aa12.94□□□□□ -0.34
TRAF4-206ENST00000454852 SNAP25P60880 206 aa12.94□□□□□ -0.34
TRAF4-206ENST00000454852 ERVK-9P63128 1117 aa12.94□□□□□ -0.34
TRAF4-206ENST00000454852 ERVK-24P63145 666 aa12.94□□□□□ -0.34
TRAF4-206ENST00000454852 NUCB2P80303 420 aa12.94□□□□□ -0.34
TRAF4-206ENST00000454852 TAF1CQ15572 869 aaPredicted RBP12.94□□□□□ -0.34
TRAF4-206ENST00000454852 MCTP2Q6DN12 878 aa12.94□□□□□ -0.34
TRAF4-206ENST00000454852 SNRNP48Q6IEG0 339 aaKnown RBP12.94□□□□□ -0.34
TRAF4-206ENST00000454852 C17orf99Q6UX52 265 aa12.94□□□□□ -0.34
TRAF4-206ENST00000454852 SPRYD3Q8NCJ5 442 aa12.94□□□□□ -0.34
TRAF4-206ENST00000454852 GPRC5AQ8NFJ5 357 aa12.94□□□□□ -0.34
TRAF4-206ENST00000454852 BICD2Q8TD16 824 aa12.94□□□□□ -0.34
TRAF4-206ENST00000454852 CLEC4DQ8WXI8 215 aa12.94□□□□□ -0.34
TRAF4-206ENST00000454852 PIBF1Q8WXW3 757 aa12.94□□□□□ -0.34
TRAF4-206ENST00000454852 ZFYVE28Q9HCC9 887 aa12.94□□□□□ -0.34
TRAF4-206ENST00000454852 C6orf50Q9HD87 102 aa12.94□□□□□ -0.34
TRAF4-206ENST00000454852 FBXO40Q9UH90 709 aa12.94□□□□□ -0.34
TRAF4-206ENST00000454852 PCDHA4Q9UN74 947 aa12.94□□□□□ -0.34
TRAF4-206ENST00000454852 RIPK3Q9Y572 518 aa12.94□□□□□ -0.34
TRAF4-206ENST00000454852 SMCO2A6NFE2 343 aa12.93□□□□□ -0.34
TRAF4-206ENST00000454852 U2AF2P26368 475 aaKnown RBP eCLIP12.93□□□□□ -0.34
TRAF4-206ENST00000454852 CLK2P49760 499 aaKnown RBP12.93□□□□□ -0.34
TRAF4-206ENST00000454852 MRPL12P52815 198 aaKnown RBP12.93□□□□□ -0.34
TRAF4-206ENST00000454852 CCNA1P78396 465 aa12.93□□□□□ -0.34
TRAF4-206ENST00000454852 MCF2L2Q86YR7 1114 aa12.93□□□□□ -0.34
TRAF4-206ENST00000454852 CPXCR1Q8N123 301 aa12.93□□□□□ -0.34
TRAF4-206ENST00000454852 CUL5Q93034 780 aa12.93□□□□□ -0.34
TRAF4-206ENST00000454852 TNFRSF25Q93038 417 aa12.93□□□□□ -0.34
TRAF4-206ENST00000454852 MOV10L1Q9BXT6 1211 aaKnown RBP12.93□□□□□ -0.34
TRAF4-206ENST00000454852 FOXP1Q9H334 677 aaPredicted RBP12.93□□□□□ -0.34
TRAF4-206ENST00000454852 MROH8Q9H579 483 aa12.93□□□□□ -0.34
TRAF4-206ENST00000454852 GJB4Q9NTQ9 266 aa12.93□□□□□ -0.34
TRAF4-206ENST00000454852 SMCHD1A6NHR9 2005 aa12.93□□□□□ -0.34
TRAF4-206ENST00000454852 H3BQV1 296 aa12.92□□□□□ -0.34
TRAF4-206ENST00000454852 MEIS2O14770 477 aa12.92□□□□□ -0.34
TRAF4-206ENST00000454852 HSD17B4P51659 736 aa12.92□□□□□ -0.34
TRAF4-206ENST00000454852 ADCY7P51828 1080 aa12.92□□□□□ -0.34
TRAF4-206ENST00000454852 NLRP5P59047 1200 aa12.92□□□□□ -0.34
TRAF4-206ENST00000454852 HTRA3P83110 453 aa12.92□□□□□ -0.34
TRAF4-206ENST00000454852 CRHR2Q13324 411 aa12.92□□□□□ -0.34
TRAF4-206ENST00000454852 SAFBQ15424 915 aaKnown RBP eCLIP12.92□□□□□ -0.34
TRAF4-206ENST00000454852 Q3C1V9 767 aa12.92□□□□□ -0.34
TRAF4-206ENST00000454852 USH1GQ495M9 461 aa12.92□□□□□ -0.34
TRAF4-206ENST00000454852 NOM1Q5C9Z4 860 aaKnown RBP12.92□□□□□ -0.34
TRAF4-206ENST00000454852 IFFO2Q5TF58 517 aa12.92□□□□□ -0.34
TRAF4-206ENST00000454852 BLIDQ8IZY5 108 aa12.92□□□□□ -0.34
TRAF4-206ENST00000454852 TRERF1Q96PN7 1200 aa12.92□□□□□ -0.34
TRAF4-206ENST00000454852 ACAD9Q9H845 621 aa12.92□□□□□ -0.34
TRAF4-206ENST00000454852 PSTPIP2Q9H939 334 aa12.92□□□□□ -0.34
TRAF4-206ENST00000454852 BRMS1Q9HCU9 246 aa12.92□□□□□ -0.34
TRAF4-206ENST00000454852 RNF146Q9NTX7 359 aa12.92□□□□□ -0.34
TRAF4-206ENST00000454852 SAGE1Q9NXZ1 904 aa12.92□□□□□ -0.34
TRAF4-206ENST00000454852 CHMP5Q9NZZ3 219 aa12.92□□□□□ -0.34
TRAF4-206ENST00000454852 KCNJ14Q9UNX9 436 aa12.92□□□□□ -0.34
TRAF4-206ENST00000454852 ZDHHC9Q9Y397 364 aa12.92□□□□□ -0.34
TRAF4-206ENST00000454852 ZNF236Q9UL36 1845 aa12.91□□□□□ -0.34
TRAF4-206ENST00000454852 ZSCAN22P10073 491 aaPredicted RBP12.91□□□□□ -0.34
TRAF4-206ENST00000454852 ALAS1P13196 640 aa12.91□□□□□ -0.34
TRAF4-206ENST00000454852 KRT2P35908 639 aa12.91□□□□□ -0.34
TRAF4-206ENST00000454852 GRM1Q13255 1194 aa12.91□□□□□ -0.34
TRAF4-206ENST00000454852 AP3B2Q13367 1082 aa12.91□□□□□ -0.34
TRAF4-206ENST00000454852 SAMD1Q6SPF0 538 aaPredicted RBP12.91□□□□□ -0.34
TRAF4-206ENST00000454852 DIS3L2Q8IYB7 885 aaKnown RBP12.91□□□□□ -0.34
TRAF4-206ENST00000454852 ABRAQ8N0Z2 381 aa12.91□□□□□ -0.34
TRAF4-206ENST00000454852 REXO1Q8N1G1 1221 aaKnown RBP12.91□□□□□ -0.34
TRAF4-206ENST00000454852 ANKRD13CQ8N6S4 541 aa12.91□□□□□ -0.34
TRAF4-206ENST00000454852 PAGR1Q9BTK6 254 aa12.91□□□□□ -0.34
TRAF4-206ENST00000454852 ZSCAN16Q9H4T2 348 aaPredicted RBP12.91□□□□□ -0.34
TRAF4-206ENST00000454852 VPS37CA5D8V6 355 aaPredicted RBP12.9□□□□□ -0.34
TRAF4-206ENST00000454852 BTBD18B2RXH4 712 aa12.9□□□□□ -0.34
TRAF4-206ENST00000454852 GCOM1H8Y6P7 765 aaPredicted RBP12.9□□□□□ -0.34
TRAF4-206ENST00000454852 NFIBO00712 420 aa12.9□□□□□ -0.34
TRAF4-206ENST00000454852 FOSP01100 380 aaPredicted RBP12.9□□□□□ -0.34
TRAF4-206ENST00000454852 POLR2MP0CAP2 368 aa12.9□□□□□ -0.34
TRAF4-206ENST00000454852 ERCC3P19447 782 aa12.9□□□□□ -0.34
TRAF4-206ENST00000454852 RESTQ13127 1097 aa12.9□□□□□ -0.34
TRAF4-206ENST00000454852 PKP1Q13835 747 aa12.9□□□□□ -0.34
TRAF4-206ENST00000454852 MUM1L1Q5H9M0 696 aa12.9□□□□□ -0.34
TRAF4-206ENST00000454852 BRAPQ7Z569 592 aa12.9□□□□□ -0.34
TRAF4-206ENST00000454852 DNAJC5GQ8N7S2 189 aa12.9□□□□□ -0.34
TRAF4-206ENST00000454852 RNF186Q9NXI6 227 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms