RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 ARVCFO00192 962 aa7.14□□□□□ -1.27
HLA-DPA3-207ENST00000454398 RNF113AO15541 343 aaKnown RBP7.14□□□□□ -1.27
HLA-DPA3-207ENST00000454398 ZBED4O75132 1171 aa7.14□□□□□ -1.27
HLA-DPA3-207ENST00000454398 TTLL1O95922 423 aa7.14□□□□□ -1.27
HLA-DPA3-207ENST00000454398 TSPY3P0CV98 308 aa7.14□□□□□ -1.27
HLA-DPA3-207ENST00000454398 TSPY8P0CW00 308 aa7.14□□□□□ -1.27
HLA-DPA3-207ENST00000454398 CYP2C9P11712 490 aa7.14□□□□□ -1.27
HLA-DPA3-207ENST00000454398 SMPD1P17405 629 aa7.14□□□□□ -1.27
HLA-DPA3-207ENST00000454398 MCCP23508 829 aa7.14□□□□□ -1.27
HLA-DPA3-207ENST00000454398 COPB2P35606 906 aa7.14□□□□□ -1.27
HLA-DPA3-207ENST00000454398 SLC16A2P36021 539 aa7.14□□□□□ -1.27
HLA-DPA3-207ENST00000454398 STAT2P52630 851 aa7.14□□□□□ -1.27
HLA-DPA3-207ENST00000454398 GJA9P57773 515 aa7.14□□□□□ -1.27
HLA-DPA3-207ENST00000454398 TNFAIP2Q03169 654 aa7.14□□□□□ -1.27
HLA-DPA3-207ENST00000454398 CTDSPL2Q05D32 466 aa7.14□□□□□ -1.27
HLA-DPA3-207ENST00000454398 FSCN1Q16658 493 aaKnown RBP7.14□□□□□ -1.27
HLA-DPA3-207ENST00000454398 CCDC96Q2M329 555 aa7.14□□□□□ -1.27
HLA-DPA3-207ENST00000454398 FRMPD2Q68DX3 1309 aaPredicted RBP7.14□□□□□ -1.27
HLA-DPA3-207ENST00000454398 PSRC1Q6PGN9 363 aaPredicted RBP7.14□□□□□ -1.27
HLA-DPA3-207ENST00000454398 NSMFQ6X4W1 530 aa7.14□□□□□ -1.27
HLA-DPA3-207ENST00000454398 RPAP2Q8IXW5 612 aaPredicted RBP7.14□□□□□ -1.27
HLA-DPA3-207ENST00000454398 FAM133AQ8N9E0 248 aa7.14□□□□□ -1.27
HLA-DPA3-207ENST00000454398 PRPF38AQ8NAV1 312 aaKnown RBP7.14□□□□□ -1.27
HLA-DPA3-207ENST00000454398 GAS2L1Q99501 681 aaPredicted RBP7.14□□□□□ -1.27
HLA-DPA3-207ENST00000454398 TSEN34Q9BSV6 310 aaKnown RBP7.14□□□□□ -1.27
HLA-DPA3-207ENST00000454398 NOC4LQ9BVI4 516 aaKnown RBP7.14□□□□□ -1.27
HLA-DPA3-207ENST00000454398 ACAD9Q9H845 621 aa7.14□□□□□ -1.27
HLA-DPA3-207ENST00000454398 TRMT13Q9NUP7 481 aaKnown RBP7.14□□□□□ -1.27
HLA-DPA3-207ENST00000454398 NYAP2Q9P242 653 aa7.14□□□□□ -1.27
HLA-DPA3-207ENST00000454398 STX8Q9UNK0 236 aa7.14□□□□□ -1.27
HLA-DPA3-207ENST00000454398 MUC6Q6W4X9 2439 aa7.13□□□□□ -1.27
HLA-DPA3-207ENST00000454398 ELP1O95163 1332 aa7.13□□□□□ -1.27
HLA-DPA3-207ENST00000454398 MROH7Q68CQ1 1323 aa7.13□□□□□ -1.27
HLA-DPA3-207ENST00000454398 TNFRSF10AO00220 468 aa7.13□□□□□ -1.27
HLA-DPA3-207ENST00000454398 RFXAPO00287 272 aa7.13□□□□□ -1.27
HLA-DPA3-207ENST00000454398 NFIBO00712 420 aa7.13□□□□□ -1.27
HLA-DPA3-207ENST00000454398 ATP2A1O14983 1001 aa7.13□□□□□ -1.27
HLA-DPA3-207ENST00000454398 CD4P01730 458 aa7.13□□□□□ -1.27
HLA-DPA3-207ENST00000454398 BMP3P12645 472 aa7.13□□□□□ -1.27
HLA-DPA3-207ENST00000454398 COL9A1P20849 921 aa7.13□□□□□ -1.27
HLA-DPA3-207ENST00000454398 SLC1A4P43007 532 aa7.13□□□□□ -1.27
HLA-DPA3-207ENST00000454398 KCNQ1P51787 676 aa7.13□□□□□ -1.27
HLA-DPA3-207ENST00000454398 CHMP4BP1P59074 171 aa7.13□□□□□ -1.27
HLA-DPA3-207ENST00000454398 PPARAQ07869 468 aa7.13□□□□□ -1.27
HLA-DPA3-207ENST00000454398 TTLL4Q14679 1199 aa7.13□□□□□ -1.27
HLA-DPA3-207ENST00000454398 SBK1Q52WX2 424 aa7.13□□□□□ -1.27
HLA-DPA3-207ENST00000454398 VPS53Q5VIR6 699 aa7.13□□□□□ -1.27
HLA-DPA3-207ENST00000454398 PPP2R2DQ66LE6 453 aa7.13□□□□□ -1.27
HLA-DPA3-207ENST00000454398 TTBK2Q6IQ55 1244 aa7.13□□□□□ -1.27
HLA-DPA3-207ENST00000454398 ZSCAN25Q6NSZ9 544 aa7.13□□□□□ -1.27
HLA-DPA3-207ENST00000454398 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.13□□□□□ -1.27
HLA-DPA3-207ENST00000454398 TMCO2Q7Z6W1 182 aaPredicted RBP7.13□□□□□ -1.27
HLA-DPA3-207ENST00000454398 DEFB128Q7Z7B8 93 aa7.13□□□□□ -1.27
HLA-DPA3-207ENST00000454398 ZNF467Q7Z7K2 595 aaPredicted RBP7.13□□□□□ -1.27
HLA-DPA3-207ENST00000454398 TMEM199Q8N511 208 aa7.13□□□□□ -1.27
HLA-DPA3-207ENST00000454398 MSL3Q8N5Y2 521 aaKnown RBP7.13□□□□□ -1.27
HLA-DPA3-207ENST00000454398 GMCL1P1Q8NEA9 526 aa7.13□□□□□ -1.27
HLA-DPA3-207ENST00000454398 TOX2Q96NM4 488 aa7.13□□□□□ -1.27
HLA-DPA3-207ENST00000454398 FSD1Q9BTV5 496 aa7.13□□□□□ -1.27
HLA-DPA3-207ENST00000454398 NAPBQ9H115 298 aa7.13□□□□□ -1.27
HLA-DPA3-207ENST00000454398 ABHD16BQ9H3Z7 469 aa7.13□□□□□ -1.27
HLA-DPA3-207ENST00000454398 SPC25Q9HBM1 224 aa7.13□□□□□ -1.27
HLA-DPA3-207ENST00000454398 IL23AQ9NPF7 189 aa7.13□□□□□ -1.27
HLA-DPA3-207ENST00000454398 FEM1BQ9UK73 627 aa7.13□□□□□ -1.27
HLA-DPA3-207ENST00000454398 RCAN3Q9UKA8 241 aa7.13□□□□□ -1.27
HLA-DPA3-207ENST00000454398 CCPG1Q9ULG6 757 aa7.13□□□□□ -1.27
HLA-DPA3-207ENST00000454398 SCN10AQ9Y5Y9 1956 aa7.13□□□□□ -1.27
HLA-DPA3-207ENST00000454398 TLR3O15455 904 aaKnown RBP7.12□□□□□ -1.27
HLA-DPA3-207ENST00000454398 DYNC1LI2O43237 492 aaPredicted RBP7.12□□□□□ -1.27
HLA-DPA3-207ENST00000454398 CA3P07451 260 aa7.12□□□□□ -1.27
HLA-DPA3-207ENST00000454398 TFAP4Q01664 338 aa7.12□□□□□ -1.27
HLA-DPA3-207ENST00000454398 ITGA7Q13683 1181 aa7.12□□□□□ -1.27
HLA-DPA3-207ENST00000454398 SKIV2LQ15477 1246 aaKnown RBP7.12□□□□□ -1.27
HLA-DPA3-207ENST00000454398 TCTN1Q2MV58 587 aa7.12□□□□□ -1.27
HLA-DPA3-207ENST00000454398 FAM47CQ5HY64 1035 aa7.12□□□□□ -1.27
HLA-DPA3-207ENST00000454398 RRP12Q5JTH9 1297 aaKnown RBP7.12□□□□□ -1.27
HLA-DPA3-207ENST00000454398 IFNL3Q8IZI9 196 aa7.12□□□□□ -1.27
HLA-DPA3-207ENST00000454398 ZNF444Q8N0Y2 327 aaPredicted RBP7.12□□□□□ -1.27
HLA-DPA3-207ENST00000454398 SLC43A3Q8NBI5 491 aa7.12□□□□□ -1.27
HLA-DPA3-207ENST00000454398 PCSK9Q8NBP7 692 aaKnown RBP7.12□□□□□ -1.27
HLA-DPA3-207ENST00000454398 CHST13Q8NET6 341 aa7.12□□□□□ -1.27
HLA-DPA3-207ENST00000454398 PI4K2BQ8TCG2 481 aa7.12□□□□□ -1.27
HLA-DPA3-207ENST00000454398 GPATCH3Q96I76 525 aa7.12□□□□□ -1.27
HLA-DPA3-207ENST00000454398 TRERF1Q96PN7 1200 aa7.12□□□□□ -1.27
HLA-DPA3-207ENST00000454398 UHRF1Q96T88 793 aaPredicted RBP7.12□□□□□ -1.27
HLA-DPA3-207ENST00000454398 CPVLQ9H3G5 476 aa7.12□□□□□ -1.27
HLA-DPA3-207ENST00000454398 IL17RBQ9NRM6 502 aa7.12□□□□□ -1.27
HLA-DPA3-207ENST00000454398 CYP39A1Q9NYL5 469 aa7.12□□□□□ -1.27
HLA-DPA3-207ENST00000454398 FBXO40Q9UH90 709 aa7.12□□□□□ -1.27
HLA-DPA3-207ENST00000454398 PRR12Q9ULL5 1215 aa7.12□□□□□ -1.27
HLA-DPA3-207ENST00000454398 GNEQ9Y223 722 aaKnown RBP7.12□□□□□ -1.27
HLA-DPA3-207ENST00000454398 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.12□□□□□ -1.27
HLA-DPA3-207ENST00000454398 LAMA4Q16363 1823 aa7.11□□□□□ -1.27
HLA-DPA3-207ENST00000454398 TSPY2A6NKD2 308 aa7.11□□□□□ -1.27
HLA-DPA3-207ENST00000454398 MYL3P08590 195 aa7.11□□□□□ -1.27
HLA-DPA3-207ENST00000454398 ATP2A2P16615 1042 aaKnown RBP7.11□□□□□ -1.27
HLA-DPA3-207ENST00000454398 OAZ1P54368 228 aa7.11□□□□□ -1.27
HLA-DPA3-207ENST00000454398 NKX3-2P78367 333 aa7.11□□□□□ -1.27
HLA-DPA3-207ENST00000454398 RAB30Q15771 203 aa7.11□□□□□ -1.27
HLA-DPA3-207ENST00000454398 DIEXFQ68CQ4 756 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms