RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 RALYLQ86SE5 291 aaKnown RBP17.03■□□□□ 0.32
HSPG2-207ENST00000453796 STAG2Q8N3U4 1231 aa17.03■□□□□ 0.32
HSPG2-207ENST00000453796 IGDCC4Q8TDY8 1250 aa17.03■□□□□ 0.32
HSPG2-207ENST00000453796 LENG1Q96BZ8 264 aaPredicted RBP17.03■□□□□ 0.32
HSPG2-207ENST00000453796 SENP6Q9GZR1 1112 aaPredicted RBP17.03■□□□□ 0.32
HSPG2-207ENST00000453796 PRO3102Q9H379 93 aa17.03■□□□□ 0.32
HSPG2-207ENST00000453796 IFIT3O14879 490 aaKnown RBP17.02■□□□□ 0.32
HSPG2-207ENST00000453796 SLC27A2O14975 620 aa17.02■□□□□ 0.32
HSPG2-207ENST00000453796 ADAMTS4O75173 837 aa17.02■□□□□ 0.32
HSPG2-207ENST00000453796 BAATQ14032 418 aaPredicted RBP17.02■□□□□ 0.32
HSPG2-207ENST00000453796 COL9A3Q14050 684 aaPredicted RBP17.02■□□□□ 0.32
HSPG2-207ENST00000453796 CDC37Q16543 378 aaPredicted RBP17.02■□□□□ 0.32
HSPG2-207ENST00000453796 CHST3Q7LGC8 479 aa17.02■□□□□ 0.32
HSPG2-207ENST00000453796 C7orf61Q8IZ16 206 aa17.02■□□□□ 0.32
HSPG2-207ENST00000453796 MORC4Q8TE76 937 aa17.02■□□□□ 0.32
HSPG2-207ENST00000453796 PURBQ96QR8 312 aaKnown RBP17.02■□□□□ 0.32
HSPG2-207ENST00000453796 XPNPEP3Q9NQH7 507 aa17.02■□□□□ 0.32
HSPG2-207ENST00000453796 MAD2L2Q9UI95 211 aa17.02■□□□□ 0.32
HSPG2-207ENST00000453796 ZHX1Q9UKY1 873 aaPredicted RBP17.02■□□□□ 0.32
HSPG2-207ENST00000453796 FAM184BQ9ULE4 1060 aa17.02■□□□□ 0.32
HSPG2-207ENST00000453796 COLQQ9Y215 455 aaPredicted RBP17.02■□□□□ 0.32
HSPG2-207ENST00000453796 RANBP2P49792 3224 aaKnown RBP17.01■□□□□ 0.31
HSPG2-207ENST00000453796 PALM3A6NDB9 673 aaPredicted RBP17.01■□□□□ 0.31
HSPG2-207ENST00000453796 ASB14A6NK59 587 aa17.01■□□□□ 0.31
HSPG2-207ENST00000453796 KBTBD13C9JR72 458 aa17.01■□□□□ 0.31
HSPG2-207ENST00000453796 PGK1P00558 417 aa17.01■□□□□ 0.31
HSPG2-207ENST00000453796 CCDC144BQ3MJ40 725 aa17.01■□□□□ 0.31
HSPG2-207ENST00000453796 CREB3L3Q68CJ9 461 aa17.01■□□□□ 0.31
HSPG2-207ENST00000453796 MTMR8Q96EF0 704 aa17.01■□□□□ 0.31
HSPG2-207ENST00000453796 JMJD4Q9H9V9 463 aa17.01■□□□□ 0.31
HSPG2-207ENST00000453796 ANO2Q9NQ90 1003 aa17.01■□□□□ 0.31
HSPG2-207ENST00000453796 DDX49Q9Y6V7 483 aaKnown RBP17.01■□□□□ 0.31
HSPG2-207ENST00000453796 SYNRGQ9UMZ2 1314 aa17■□□□□ 0.31
HSPG2-207ENST00000453796 ERICH2A1L162 156 aa17■□□□□ 0.31
HSPG2-207ENST00000453796 DUSP11O75319 330 aaKnown RBP17■□□□□ 0.31
HSPG2-207ENST00000453796 CDC45O75419 566 aa17■□□□□ 0.31
HSPG2-207ENST00000453796 TROAPQ12815 778 aa17■□□□□ 0.31
HSPG2-207ENST00000453796 GRM4Q14833 912 aa17■□□□□ 0.31
HSPG2-207ENST00000453796 WTAPQ15007 396 aa17■□□□□ 0.31
HSPG2-207ENST00000453796 SLC35G1Q2M3R5 365 aa17■□□□□ 0.31
HSPG2-207ENST00000453796 QRICH1Q2TAL8 776 aa17■□□□□ 0.31
HSPG2-207ENST00000453796 HABP4Q5JVS0 413 aaKnown RBP17■□□□□ 0.31
HSPG2-207ENST00000453796 SLC30A10Q6XR72 485 aa17■□□□□ 0.31
HSPG2-207ENST00000453796 MTA3Q9BTC8 594 aa17■□□□□ 0.31
HSPG2-207ENST00000453796 PHF24Q9UPV7 400 aa17■□□□□ 0.31
HSPG2-207ENST00000453796 LTBP2Q14767 1821 aa16.99■□□□□ 0.31
HSPG2-207ENST00000453796 LOC102724159A0A0B4J2E5 919 aa16.99■□□□□ 0.31
HSPG2-207ENST00000453796 KLRF2D3W0D1 207 aa16.99■□□□□ 0.31
HSPG2-207ENST00000453796 ALDH5A1P51649 535 aaPredicted RBP16.99■□□□□ 0.31
HSPG2-207ENST00000453796 SART3Q15020 963 aaKnown RBP16.99■□□□□ 0.31
HSPG2-207ENST00000453796 SNX17Q15036 470 aa16.99■□□□□ 0.31
HSPG2-207ENST00000453796 PWP2Q15269 919 aaKnown RBP16.99■□□□□ 0.31
HSPG2-207ENST00000453796 USH1GQ495M9 461 aa16.99■□□□□ 0.31
HSPG2-207ENST00000453796 TMEM67Q5HYA8 995 aa16.99■□□□□ 0.31
HSPG2-207ENST00000453796 CCSAPQ6IQ19 270 aaPredicted RBP16.99■□□□□ 0.31
HSPG2-207ENST00000453796 CHRDL2Q6WN34 429 aa16.99■□□□□ 0.31
HSPG2-207ENST00000453796 SLC39A5Q6ZMH5 540 aa16.99■□□□□ 0.31
HSPG2-207ENST00000453796 RGS22Q8NE09 1264 aa16.99■□□□□ 0.31
HSPG2-207ENST00000453796 KLHDC9Q8NEP7 349 aa16.99■□□□□ 0.31
HSPG2-207ENST00000453796 MAF1Q9H063 256 aa16.99■□□□□ 0.31
HSPG2-207ENST00000453796 UPF3AQ9H1J1 476 aaKnown RBP16.99■□□□□ 0.31
HSPG2-207ENST00000453796 LY9Q9HBG7 655 aa16.99■□□□□ 0.31
HSPG2-207ENST00000453796 ABCB11O95342 1321 aa16.98■□□□□ 0.31
HSPG2-207ENST00000453796 KIAA1217Q5T5P2 1943 aa16.98■□□□□ 0.31
HSPG2-207ENST00000453796 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.98■□□□□ 0.31
HSPG2-207ENST00000453796 PTPDC1A2A3K4 754 aa16.98■□□□□ 0.31
HSPG2-207ENST00000453796 NEFLP07196 543 aa16.98■□□□□ 0.31
HSPG2-207ENST00000453796 CST5P28325 142 aaPredicted RBP16.98■□□□□ 0.31
HSPG2-207ENST00000453796 ADCYAP1R1P41586 468 aa16.98■□□□□ 0.31
HSPG2-207ENST00000453796 RPS6P62753 249 aaKnown RBP16.98■□□□□ 0.31
HSPG2-207ENST00000453796 NKX3-2P78367 333 aa16.98■□□□□ 0.31
HSPG2-207ENST00000453796 IRX5P78411 483 aaPredicted RBP16.98■□□□□ 0.31
HSPG2-207ENST00000453796 TAPT1Q6NXT6 567 aa16.98■□□□□ 0.31
HSPG2-207ENST00000453796 RNF207Q6ZRF8 634 aa16.98■□□□□ 0.31
HSPG2-207ENST00000453796 RNF180Q86T96 592 aa16.98■□□□□ 0.31
HSPG2-207ENST00000453796 TSEN34Q9BSV6 310 aaKnown RBP16.98■□□□□ 0.31
HSPG2-207ENST00000453796 RIOX1Q9H6W3 641 aa16.98■□□□□ 0.31
HSPG2-207ENST00000453796 GPHNQ9NQX3 736 aaPredicted RBP16.98■□□□□ 0.31
HSPG2-207ENST00000453796 ZMYND8Q9ULU4 1186 aaPredicted RBP16.98■□□□□ 0.31
HSPG2-207ENST00000453796 MYADML2A6NDP7 307 aa16.97■□□□□ 0.31
HSPG2-207ENST00000453796 PRC1O43663 620 aa16.97■□□□□ 0.31
HSPG2-207ENST00000453796 PPP1R11O60927 126 aaPredicted RBP16.97■□□□□ 0.31
HSPG2-207ENST00000453796 EDNRBP24530 442 aa16.97■□□□□ 0.31
HSPG2-207ENST00000453796 CALML3P27482 149 aa16.97■□□□□ 0.31
HSPG2-207ENST00000453796 MCM5P33992 734 aa16.97■□□□□ 0.31
HSPG2-207ENST00000453796 ATN1P54259 1190 aaPredicted RBP16.97■□□□□ 0.31
HSPG2-207ENST00000453796 GJA9P57773 515 aa16.97■□□□□ 0.31
HSPG2-207ENST00000453796 RTP1P59025 263 aa16.97■□□□□ 0.31
HSPG2-207ENST00000453796 C1orf53Q5VUE5 145 aa16.97■□□□□ 0.31
HSPG2-207ENST00000453796 FBXO11Q86XK2 927 aa16.97■□□□□ 0.31
HSPG2-207ENST00000453796 TBC1D5Q92609 795 aa16.97■□□□□ 0.31
HSPG2-207ENST00000453796 VAT1LQ9HCJ6 419 aa16.97■□□□□ 0.31
HSPG2-207ENST00000453796 RBM27Q9P2N5 1060 aaKnown RBP16.97■□□□□ 0.31
HSPG2-207ENST00000453796 ADD3Q9UEY8 706 aaKnown RBP16.97■□□□□ 0.31
HSPG2-207ENST00000453796 GNEQ9Y223 722 aaKnown RBP16.97■□□□□ 0.31
HSPG2-207ENST00000453796 TRIOBPQ9H2D6 2365 aa16.97■□□□□ 0.31
HSPG2-207ENST00000453796 SH2B2O14492 632 aaPredicted RBP16.96■□□□□ 0.31
HSPG2-207ENST00000453796 OPLAHO14841 1288 aa16.96■□□□□ 0.31
HSPG2-207ENST00000453796 CTAGE5O15320 804 aa16.96■□□□□ 0.31
HSPG2-207ENST00000453796 CYTH3O43739 400 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms