RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 STAG2Q8N3U4 1231 aa21.72■■□□□ 1.07
CCDC188-202ENST00000444532 CLEC4DQ8WXI8 215 aa21.72■■□□□ 1.07
CCDC188-202ENST00000444532 TMEM87BQ96K49 555 aa21.72■■□□□ 1.07
CCDC188-202ENST00000444532 MAF1Q9H063 256 aa21.72■■□□□ 1.07
CCDC188-202ENST00000444532 JMJD4Q9H9V9 463 aa21.72■■□□□ 1.07
CCDC188-202ENST00000444532 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.72■■□□□ 1.07
CCDC188-202ENST00000444532 MYH6P13533 1939 aa21.71■■□□□ 1.07
CCDC188-202ENST00000444532 MCM3APO60318 1980 aa21.71■■□□□ 1.07
CCDC188-202ENST00000444532 SOWAHBA6NEL2 793 aa21.71■■□□□ 1.07
CCDC188-202ENST00000444532 DNM1LO00429 736 aa21.71■■□□□ 1.07
CCDC188-202ENST00000444532 NFIBO00712 420 aa21.71■■□□□ 1.07
CCDC188-202ENST00000444532 DHX16O60231 1041 aaKnown RBP21.71■■□□□ 1.07
CCDC188-202ENST00000444532 RARBP10826 455 aa21.71■■□□□ 1.07
CCDC188-202ENST00000444532 AKR1A1P14550 325 aa21.71■■□□□ 1.07
CCDC188-202ENST00000444532 TROAPQ12815 778 aa21.71■■□□□ 1.07
CCDC188-202ENST00000444532 ACVR2BQ13705 512 aa21.71■■□□□ 1.07
CCDC188-202ENST00000444532 BAATQ14032 418 aaPredicted RBP21.71■■□□□ 1.07
CCDC188-202ENST00000444532 GRM4Q14833 912 aa21.71■■□□□ 1.07
CCDC188-202ENST00000444532 TSGA10IPQ3SY00 556 aa21.71■■□□□ 1.07
CCDC188-202ENST00000444532 CCDC144CPQ8IYA2 1237 aa21.71■■□□□ 1.07
CCDC188-202ENST00000444532 SENP2Q9HC62 589 aa21.71■■□□□ 1.07
CCDC188-202ENST00000444532 FAM184BQ9ULE4 1060 aa21.71■■□□□ 1.07
CCDC188-202ENST00000444532 NR2E3Q9Y5X4 410 aa21.71■■□□□ 1.07
CCDC188-202ENST00000444532 ANO1Q5XXA6 986 aa21.7■■□□□ 1.06
CCDC188-202ENST00000444532 RGS22Q8NE09 1264 aa21.7■■□□□ 1.06
CCDC188-202ENST00000444532 MAP3K14Q99558 947 aa21.7■■□□□ 1.06
CCDC188-202ENST00000444532 LY9Q9HBG7 655 aa21.7■■□□□ 1.06
CCDC188-202ENST00000444532 VAT1LQ9HCJ6 419 aa21.7■■□□□ 1.06
CCDC188-202ENST00000444532 ADD3Q9UEY8 706 aaKnown RBP21.7■■□□□ 1.06
CCDC188-202ENST00000444532 LOC102724159A0A0B4J2E5 919 aa21.69■■□□□ 1.06
CCDC188-202ENST00000444532 PTPDC1A2A3K4 754 aa21.69■■□□□ 1.06
CCDC188-202ENST00000444532 EVI5O60447 810 aa21.69■■□□□ 1.06
CCDC188-202ENST00000444532 PWP2Q15269 919 aaKnown RBP21.69■■□□□ 1.06
CCDC188-202ENST00000444532 QRICH1Q2TAL8 776 aa21.69■■□□□ 1.06
CCDC188-202ENST00000444532 USH1GQ495M9 461 aa21.69■■□□□ 1.06
CCDC188-202ENST00000444532 RNF207Q6ZRF8 634 aa21.69■■□□□ 1.06
CCDC188-202ENST00000444532 FBXO11Q86XK2 927 aa21.69■■□□□ 1.06
CCDC188-202ENST00000444532 MTMR8Q96EF0 704 aa21.69■■□□□ 1.06
CCDC188-202ENST00000444532 XPNPEP3Q9NQH7 507 aa21.69■■□□□ 1.06
CCDC188-202ENST00000444532 ZHX1Q9UKY1 873 aaPredicted RBP21.69■■□□□ 1.06
CCDC188-202ENST00000444532 ABCB11O95342 1321 aa21.69■■□□□ 1.06
CCDC188-202ENST00000444532 LCTP09848 1927 aa21.68■■□□□ 1.06
CCDC188-202ENST00000444532 KBTBD13C9JR72 458 aa21.68■■□□□ 1.06
CCDC188-202ENST00000444532 LIFRP42702 1097 aa21.68■■□□□ 1.06
CCDC188-202ENST00000444532 KRT32Q14532 448 aa21.68■■□□□ 1.06
CCDC188-202ENST00000444532 GJC2Q5T442 439 aaPredicted RBP21.68■■□□□ 1.06
CCDC188-202ENST00000444532 ALPK3Q96L96 1907 aa21.68■■□□□ 1.06
CCDC188-202ENST00000444532 ASTN1O14525 1302 aa21.67■■□□□ 1.06
CCDC188-202ENST00000444532 H0YGN5 161 aa21.67■■□□□ 1.06
CCDC188-202ENST00000444532 SH2B2O14492 632 aaPredicted RBP21.67■■□□□ 1.06
CCDC188-202ENST00000444532 DDAH1O94760 285 aa21.67■■□□□ 1.06
CCDC188-202ENST00000444532 LRRC41Q15345 812 aa21.67■■□□□ 1.06
CCDC188-202ENST00000444532 ZNF654Q8IZM8 581 aa21.67■■□□□ 1.06
CCDC188-202ENST00000444532 MORC4Q8TE76 937 aa21.67■■□□□ 1.06
CCDC188-202ENST00000444532 NEK1Q96PY6 1258 aa21.67■■□□□ 1.06
CCDC188-202ENST00000444532 AMNQ9BXJ7 453 aa21.67■■□□□ 1.06
CCDC188-202ENST00000444532 KATNBL1Q9H079 304 aa21.67■■□□□ 1.06
CCDC188-202ENST00000444532 RIOX1Q9H6W3 641 aa21.67■■□□□ 1.06
CCDC188-202ENST00000444532 MRPL11Q9Y3B7 192 aaKnown RBP21.67■■□□□ 1.06
CCDC188-202ENST00000444532 CCDC69A6NI79 296 aa21.66■■□□□ 1.06
CCDC188-202ENST00000444532 ZBTB5O15062 677 aa21.66■■□□□ 1.06
CCDC188-202ENST00000444532 DUSP11O75319 330 aaKnown RBP21.66■■□□□ 1.06
CCDC188-202ENST00000444532 REC8O95072 547 aa21.66■■□□□ 1.06
CCDC188-202ENST00000444532 KIF5BP33176 963 aa21.66■■□□□ 1.06
CCDC188-202ENST00000444532 RPS6P62753 249 aaKnown RBP21.66■■□□□ 1.06
CCDC188-202ENST00000444532 TRAF1Q13077 416 aa21.66■■□□□ 1.06
CCDC188-202ENST00000444532 CCDC144BQ3MJ40 725 aa21.66■■□□□ 1.06
CCDC188-202ENST00000444532 NFXL1Q6ZNB6 911 aa21.66■■□□□ 1.06
CCDC188-202ENST00000444532 RNF180Q86T96 592 aa21.66■■□□□ 1.06
CCDC188-202ENST00000444532 MCF2L2Q86YR7 1114 aa21.66■■□□□ 1.06
CCDC188-202ENST00000444532 SENP6Q9GZR1 1112 aaPredicted RBP21.66■■□□□ 1.06
CCDC188-202ENST00000444532 GPHNQ9NQX3 736 aaPredicted RBP21.66■■□□□ 1.06
CCDC188-202ENST00000444532 CALM1P0DP23 149 aa21.65■■□□□ 1.06
CCDC188-202ENST00000444532 CALM2P0DP24 149 aa21.65■■□□□ 1.06
CCDC188-202ENST00000444532 CALM3P0DP25 149 aa21.65■■□□□ 1.06
CCDC188-202ENST00000444532 CALML3P27482 149 aa21.65■■□□□ 1.06
CCDC188-202ENST00000444532 ALDH5A1P51649 535 aaPredicted RBP21.65■■□□□ 1.06
CCDC188-202ENST00000444532 COL9A3Q14050 684 aaPredicted RBP21.65■■□□□ 1.06
CCDC188-202ENST00000444532 SLC30A10Q6XR72 485 aa21.65■■□□□ 1.06
CCDC188-202ENST00000444532 RASEFQ8IZ41 740 aa21.65■■□□□ 1.06
CCDC188-202ENST00000444532 DNERQ8NFT8 737 aa21.65■■□□□ 1.06
CCDC188-202ENST00000444532 CTCFLQ8NI51 663 aaPredicted RBP21.65■■□□□ 1.06
CCDC188-202ENST00000444532 NUP133Q8WUM0 1156 aa21.65■■□□□ 1.06
CCDC188-202ENST00000444532 PURBQ96QR8 312 aaKnown RBP21.65■■□□□ 1.06
CCDC188-202ENST00000444532 MPHOSPH6Q99547 160 aaKnown RBP21.65■■□□□ 1.06
CCDC188-202ENST00000444532 B4DLN1 442 aa21.64■■□□□ 1.05
CCDC188-202ENST00000444532 PGK1P00558 417 aa21.64■■□□□ 1.05
CCDC188-202ENST00000444532 MYCNP04198 464 aaPredicted RBP21.64■■□□□ 1.05
CCDC188-202ENST00000444532 SMARCA1P28370 1054 aa21.64■■□□□ 1.05
CCDC188-202ENST00000444532 MRPL12P52815 198 aaKnown RBP21.64■■□□□ 1.05
CCDC188-202ENST00000444532 DHX32Q7L7V1 743 aaKnown RBP21.64■■□□□ 1.05
CCDC188-202ENST00000444532 KCNB2Q92953 911 aa21.64■■□□□ 1.05
CCDC188-202ENST00000444532 LZTS2Q9BRK4 669 aa21.64■■□□□ 1.05
CCDC188-202ENST00000444532 EPB41L2O43491 1005 aaKnown RBP21.63■■□□□ 1.05
CCDC188-202ENST00000444532 CYTH3O43739 400 aa21.63■■□□□ 1.05
CCDC188-202ENST00000444532 HMGB1P09429 215 aaKnown RBP21.63■■□□□ 1.05
CCDC188-202ENST00000444532 GNAQP50148 359 aa21.63■■□□□ 1.05
CCDC188-202ENST00000444532 EXOSC10Q01780 885 aaKnown RBP21.63■■□□□ 1.05
CCDC188-202ENST00000444532 SLC35G1Q2M3R5 365 aa21.63■■□□□ 1.05
CCDC188-202ENST00000444532 SGMS1Q86VZ5 419 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms