RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 XPNPEP3Q9NQH7 507 aa14.7□□□□□ -0.06
SMPD4-204ENST00000430682 CTNNA3Q9UI47 895 aa14.7□□□□□ -0.06
SMPD4-204ENST00000430682 ZHX1Q9UKY1 873 aaPredicted RBP14.7□□□□□ -0.06
SMPD4-204ENST00000430682 CNPY2Q9Y2B0 182 aa14.7□□□□□ -0.06
SMPD4-204ENST00000430682 SYNRGQ9UMZ2 1314 aa14.69□□□□□ -0.06
SMPD4-204ENST00000430682 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.69□□□□□ -0.06
SMPD4-204ENST00000430682 SOX1O00570 391 aaPredicted RBP14.69□□□□□ -0.06
SMPD4-204ENST00000430682 RARBP10826 455 aa14.69□□□□□ -0.06
SMPD4-204ENST00000430682 AKR1A1P14550 325 aa14.69□□□□□ -0.06
SMPD4-204ENST00000430682 RTP1P59025 263 aa14.69□□□□□ -0.06
SMPD4-204ENST00000430682 BAATQ14032 418 aaPredicted RBP14.69□□□□□ -0.06
SMPD4-204ENST00000430682 SLC35G1Q2M3R5 365 aa14.69□□□□□ -0.06
SMPD4-204ENST00000430682 CCDC144BQ3MJ40 725 aa14.69□□□□□ -0.06
SMPD4-204ENST00000430682 CCSAPQ6IQ19 270 aaPredicted RBP14.69□□□□□ -0.06
SMPD4-204ENST00000430682 NSMFQ6X4W1 530 aa14.69□□□□□ -0.06
SMPD4-204ENST00000430682 PHF24Q9UPV7 400 aa14.69□□□□□ -0.06
SMPD4-204ENST00000430682 KIAA1217Q5T5P2 1943 aa14.68□□□□□ -0.06
SMPD4-204ENST00000430682 KBTBD13C9JR72 458 aa14.68□□□□□ -0.06
SMPD4-204ENST00000430682 CTAGE5O15320 804 aa14.68□□□□□ -0.06
SMPD4-204ENST00000430682 SNX17Q15036 470 aa14.68□□□□□ -0.06
SMPD4-204ENST00000430682 IQCA1Q86XH1 822 aa14.68□□□□□ -0.06
SMPD4-204ENST00000430682 STAG2Q8N3U4 1231 aa14.68□□□□□ -0.06
SMPD4-204ENST00000430682 KLHDC9Q8NEP7 349 aa14.68□□□□□ -0.06
SMPD4-204ENST00000430682 TBC1D5Q92609 795 aa14.68□□□□□ -0.06
SMPD4-204ENST00000430682 MAP4K1Q92918 833 aa14.68□□□□□ -0.06
SMPD4-204ENST00000430682 KRT23Q9C075 422 aa14.68□□□□□ -0.06
SMPD4-204ENST00000430682 ABHD16BQ9H3Z7 469 aa14.68□□□□□ -0.06
SMPD4-204ENST00000430682 PDGFCQ9NRA1 345 aa14.68□□□□□ -0.06
SMPD4-204ENST00000430682 FAM184BQ9ULE4 1060 aa14.68□□□□□ -0.06
SMPD4-204ENST00000430682 E7EWF7 191 aa14.67□□□□□ -0.06
SMPD4-204ENST00000430682 ANTXR2P58335 489 aa14.67□□□□□ -0.06
SMPD4-204ENST00000430682 TRIM60Q495X7 471 aa14.67□□□□□ -0.06
SMPD4-204ENST00000430682 TAPT1Q6NXT6 567 aa14.67□□□□□ -0.06
SMPD4-204ENST00000430682 SLC30A10Q6XR72 485 aa14.67□□□□□ -0.06
SMPD4-204ENST00000430682 CHST3Q7LGC8 479 aa14.67□□□□□ -0.06
SMPD4-204ENST00000430682 SH3RF1Q7Z6J0 888 aa14.67□□□□□ -0.06
SMPD4-204ENST00000430682 ADGRF4Q8IZF3 695 aa14.67□□□□□ -0.06
SMPD4-204ENST00000430682 RUFY2Q8WXA3 655 aa14.67□□□□□ -0.06
SMPD4-204ENST00000430682 KAT14Q9H8E8 782 aa14.67□□□□□ -0.06
SMPD4-204ENST00000430682 ATP11BQ9Y2G3 1177 aa14.67□□□□□ -0.06
SMPD4-204ENST00000430682 MYH7BA7E2Y1 1941 aa14.66□□□□□ -0.06
SMPD4-204ENST00000430682 A0A1W2PQ45 241 aaPredicted RBP14.66□□□□□ -0.06
SMPD4-204ENST00000430682 A0A1W2PQY0 241 aa14.66□□□□□ -0.06
SMPD4-204ENST00000430682 DUSP11O75319 330 aaKnown RBP14.66□□□□□ -0.06
SMPD4-204ENST00000430682 BMP8BP34820 402 aa14.66□□□□□ -0.06
SMPD4-204ENST00000430682 MDM2Q00987 491 aaPredicted RBP14.66□□□□□ -0.06
SMPD4-204ENST00000430682 GPATCH4Q5T3I0 446 aaKnown RBP14.66□□□□□ -0.06
SMPD4-204ENST00000430682 EEPD1Q7L9B9 569 aa14.66□□□□□ -0.06
SMPD4-204ENST00000430682 LSG1Q9H089 658 aaKnown RBP14.66□□□□□ -0.06
SMPD4-204ENST00000430682 CNNM2Q9H8M5 875 aa14.66□□□□□ -0.06
SMPD4-204ENST00000430682 JMJD4Q9H9V9 463 aa14.66□□□□□ -0.06
SMPD4-204ENST00000430682 GPHNQ9NQX3 736 aaPredicted RBP14.66□□□□□ -0.06
SMPD4-204ENST00000430682 RBM8AQ9Y5S9 174 aaKnown RBP14.66□□□□□ -0.06
SMPD4-204ENST00000430682 U3KPZ7 1027 aaPredicted RBP14.66□□□□□ -0.06
SMPD4-204ENST00000430682 WDR19Q8NEZ3 1342 aa14.66□□□□□ -0.06
SMPD4-204ENST00000430682 ACLYP53396 1101 aa14.65□□□□□ -0.06
SMPD4-204ENST00000430682 TLE2Q04725 743 aa14.65□□□□□ -0.06
SMPD4-204ENST00000430682 KCNA10Q16322 511 aa14.65□□□□□ -0.06
SMPD4-204ENST00000430682 USH1GQ495M9 461 aa14.65□□□□□ -0.06
SMPD4-204ENST00000430682 CCDC178Q5BJE1 867 aa14.65□□□□□ -0.06
SMPD4-204ENST00000430682 IFIT1BQ5T764 474 aaKnown RBP14.65□□□□□ -0.06
SMPD4-204ENST00000430682 RNF180Q86T96 592 aa14.65□□□□□ -0.06
SMPD4-204ENST00000430682 FBXO16Q8IX29 292 aaPredicted RBP14.65□□□□□ -0.06
SMPD4-204ENST00000430682 MORC4Q8TE76 937 aa14.65□□□□□ -0.06
SMPD4-204ENST00000430682 ESYT1Q9BSJ8 1104 aa14.65□□□□□ -0.06
SMPD4-204ENST00000430682 UPF3AQ9H1J1 476 aaKnown RBP14.65□□□□□ -0.06
SMPD4-204ENST00000430682 VAT1LQ9HCJ6 419 aa14.65□□□□□ -0.06
SMPD4-204ENST00000430682 PTPDC1A2A3K4 754 aa14.64□□□□□ -0.07
SMPD4-204ENST00000430682 TRIM43BA6NCK2 446 aa14.64□□□□□ -0.07
SMPD4-204ENST00000430682 ASB14A6NK59 587 aa14.64□□□□□ -0.07
SMPD4-204ENST00000430682 PPP1R11O60927 126 aaPredicted RBP14.64□□□□□ -0.07
SMPD4-204ENST00000430682 SMPD1P17405 629 aa14.64□□□□□ -0.07
SMPD4-204ENST00000430682 ITGB8P26012 769 aa14.64□□□□□ -0.07
SMPD4-204ENST00000430682 CALML3P27482 149 aa14.64□□□□□ -0.07
SMPD4-204ENST00000430682 NT5C2P49902 561 aa14.64□□□□□ -0.07
SMPD4-204ENST00000430682 ALDH5A1P51649 535 aaPredicted RBP14.64□□□□□ -0.07
SMPD4-204ENST00000430682 GJA9P57773 515 aa14.64□□□□□ -0.07
SMPD4-204ENST00000430682 RPS6P62753 249 aaKnown RBP14.64□□□□□ -0.07
SMPD4-204ENST00000430682 BEX3Q00994 111 aa14.64□□□□□ -0.07
SMPD4-204ENST00000430682 CDC37Q16543 378 aaPredicted RBP14.64□□□□□ -0.07
SMPD4-204ENST00000430682 QRICH1Q2TAL8 776 aa14.64□□□□□ -0.07
SMPD4-204ENST00000430682 ASPRV1Q53RT3 343 aa14.64□□□□□ -0.07
SMPD4-204ENST00000430682 CENPQQ7L2Z9 268 aaPredicted RBP14.64□□□□□ -0.07
SMPD4-204ENST00000430682 MB21D2Q8IYB1 491 aaPredicted RBP14.64□□□□□ -0.07
SMPD4-204ENST00000430682 TRIM43Q96BQ3 446 aaPredicted RBP14.64□□□□□ -0.07
SMPD4-204ENST00000430682 LRCH3Q96II8 777 aa14.64□□□□□ -0.07
SMPD4-204ENST00000430682 UBAC1Q9BSL1 405 aa14.64□□□□□ -0.07
SMPD4-204ENST00000430682 PDLIM7Q9NR12 457 aa14.64□□□□□ -0.07
SMPD4-204ENST00000430682 COL20A1Q9P218 1284 aa14.64□□□□□ -0.07
SMPD4-204ENST00000430682 MAD2L2Q9UI95 211 aa14.64□□□□□ -0.07
SMPD4-204ENST00000430682 GNEQ9Y223 722 aaKnown RBP14.64□□□□□ -0.07
SMPD4-204ENST00000430682 OPLAHO14841 1288 aa14.63□□□□□ -0.07
SMPD4-204ENST00000430682 PARP1P09874 1014 aaKnown RBP14.63□□□□□ -0.07
SMPD4-204ENST00000430682 C6orf222P0C671 652 aaPredicted RBP14.63□□□□□ -0.07
SMPD4-204ENST00000430682 NKX3-2P78367 333 aa14.63□□□□□ -0.07
SMPD4-204ENST00000430682 TNFAIP2Q03169 654 aa14.63□□□□□ -0.07
SMPD4-204ENST00000430682 C1orf53Q5VUE5 145 aa14.63□□□□□ -0.07
SMPD4-204ENST00000430682 RNF207Q6ZRF8 634 aa14.63□□□□□ -0.07
SMPD4-204ENST00000430682 IGDCC4Q8TDY8 1250 aa14.63□□□□□ -0.07
SMPD4-204ENST00000430682 TSEN34Q9BSV6 310 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms