RNA–Protein interactions for RNA: ENST00000428555.1

TRIM39-208, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-208ENST00000428555 PARP1P09874 1014 aaKnown RBP11.08□□□□□ -0.64
TRIM39-208ENST00000428555 IRX5P78411 483 aaPredicted RBP11.08□□□□□ -0.64
TRIM39-208ENST00000428555 CCDC144BQ3MJ40 725 aa11.08□□□□□ -0.64
TRIM39-208ENST00000428555 SLC39A5Q6ZMH5 540 aa11.08□□□□□ -0.64
TRIM39-208ENST00000428555 STOX1Q6ZVD7 989 aa11.08□□□□□ -0.64
TRIM39-208ENST00000428555 ADGRF4Q8IZF3 695 aa11.08□□□□□ -0.64
TRIM39-208ENST00000428555 STAG2Q8N3U4 1231 aa11.08□□□□□ -0.64
TRIM39-208ENST00000428555 CLEC4DQ8WXI8 215 aa11.08□□□□□ -0.64
TRIM39-208ENST00000428555 ESYT1Q9BSJ8 1104 aa11.08□□□□□ -0.64
TRIM39-208ENST00000428555 KATNBL1Q9H079 304 aa11.08□□□□□ -0.64
TRIM39-208ENST00000428555 LSG1Q9H089 658 aaKnown RBP11.08□□□□□ -0.64
TRIM39-208ENST00000428555 PRO3102Q9H379 93 aa11.08□□□□□ -0.64
TRIM39-208ENST00000428555 SENP2Q9HC62 589 aa11.08□□□□□ -0.64
TRIM39-208ENST00000428555 ASTN1O14525 1302 aa11.08□□□□□ -0.64
TRIM39-208ENST00000428555 MYH4Q9Y623 1939 aa11.07□□□□□ -0.64
TRIM39-208ENST00000428555 PTPDC1A2A3K4 754 aa11.07□□□□□ -0.64
TRIM39-208ENST00000428555 ASB14A6NK59 587 aa11.07□□□□□ -0.64
TRIM39-208ENST00000428555 ADCY6O43306 1168 aa11.07□□□□□ -0.64
TRIM39-208ENST00000428555 DUSP11O75319 330 aaKnown RBP11.07□□□□□ -0.64
TRIM39-208ENST00000428555 CALML3P27482 149 aa11.07□□□□□ -0.64
TRIM39-208ENST00000428555 USH1GQ495M9 461 aa11.07□□□□□ -0.64
TRIM39-208ENST00000428555 BMP2KLQ5H9B9 411 aa11.07□□□□□ -0.64
TRIM39-208ENST00000428555 RNF180Q86T96 592 aa11.07□□□□□ -0.64
TRIM39-208ENST00000428555 NCOA7Q8NI08 942 aa11.07□□□□□ -0.64
TRIM39-208ENST00000428555 TBC1D5Q92609 795 aa11.07□□□□□ -0.64
TRIM39-208ENST00000428555 CCDC136Q96JN2 1154 aa11.07□□□□□ -0.64
TRIM39-208ENST00000428555 GDF15Q99988 308 aa11.07□□□□□ -0.64
TRIM39-208ENST00000428555 JMJD4Q9H9V9 463 aa11.07□□□□□ -0.64
TRIM39-208ENST00000428555 PDGFCQ9NRA1 345 aa11.07□□□□□ -0.64
TRIM39-208ENST00000428555 PNMA2Q9UL42 364 aa11.07□□□□□ -0.64
TRIM39-208ENST00000428555 ATP11BQ9Y2G3 1177 aa11.07□□□□□ -0.64
TRIM39-208ENST00000428555 COL11A1P12107 1806 aaPredicted RBP11.07□□□□□ -0.64
TRIM39-208ENST00000428555 PARP14Q460N5 1801 aa11.07□□□□□ -0.64
TRIM39-208ENST00000428555 KLRF2D3W0D1 207 aa11.06□□□□□ -0.64
TRIM39-208ENST00000428555 DHX16O60231 1041 aaKnown RBP11.06□□□□□ -0.64
TRIM39-208ENST00000428555 ADAMTS4O75173 837 aa11.06□□□□□ -0.64
TRIM39-208ENST00000428555 SLC34A2O95436 690 aa11.06□□□□□ -0.64
TRIM39-208ENST00000428555 MAGEA10P43363 369 aaPredicted RBP11.06□□□□□ -0.64
TRIM39-208ENST00000428555 RTP1P59025 263 aa11.06□□□□□ -0.64
TRIM39-208ENST00000428555 TNFAIP2Q03169 654 aa11.06□□□□□ -0.64
TRIM39-208ENST00000428555 KCNA10Q16322 511 aa11.06□□□□□ -0.64
TRIM39-208ENST00000428555 CDC37Q16543 378 aaPredicted RBP11.06□□□□□ -0.64
TRIM39-208ENST00000428555 ASPRV1Q53RT3 343 aa11.06□□□□□ -0.64
TRIM39-208ENST00000428555 TMEM63BQ5T3F8 832 aa11.06□□□□□ -0.64
TRIM39-208ENST00000428555 RNF207Q6ZRF8 634 aa11.06□□□□□ -0.64
TRIM39-208ENST00000428555 NOL8Q76FK4 1167 aaKnown RBP11.06□□□□□ -0.64
TRIM39-208ENST00000428555 EEPD1Q7L9B9 569 aa11.06□□□□□ -0.64
TRIM39-208ENST00000428555 RALYLQ86SE5 291 aaKnown RBP11.06□□□□□ -0.64
TRIM39-208ENST00000428555 KLHDC9Q8NEP7 349 aa11.06□□□□□ -0.64
TRIM39-208ENST00000428555 IGDCC4Q8TDY8 1250 aa11.06□□□□□ -0.64
TRIM39-208ENST00000428555 MAD2L2Q9UI95 211 aa11.06□□□□□ -0.64
TRIM39-208ENST00000428555 PHF24Q9UPV7 400 aa11.06□□□□□ -0.64
TRIM39-208ENST00000428555 ZNF236Q9UL36 1845 aa11.06□□□□□ -0.64
TRIM39-208ENST00000428555 WDR19Q8NEZ3 1342 aa11.06□□□□□ -0.64
TRIM39-208ENST00000428555 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.05□□□□□ -0.64
TRIM39-208ENST00000428555 ERICH2A1L162 156 aa11.05□□□□□ -0.64
TRIM39-208ENST00000428555 PALM3A6NDB9 673 aaPredicted RBP11.05□□□□□ -0.64
TRIM39-208ENST00000428555 MYADML2A6NDP7 307 aa11.05□□□□□ -0.64
TRIM39-208ENST00000428555 SLC27A2O14975 620 aa11.05□□□□□ -0.64
TRIM39-208ENST00000428555 C6orf222P0C671 652 aaPredicted RBP11.05□□□□□ -0.64
TRIM39-208ENST00000428555 PTGS1P23219 599 aa11.05□□□□□ -0.64
TRIM39-208ENST00000428555 FXR1P51114 621 aaKnown RBP eCLIP11.05□□□□□ -0.64
TRIM39-208ENST00000428555 ACLYP53396 1101 aa11.05□□□□□ -0.64
TRIM39-208ENST00000428555 ANTXR2P58335 489 aa11.05□□□□□ -0.64
TRIM39-208ENST00000428555 RPS6P62753 249 aaKnown RBP11.05□□□□□ -0.64
TRIM39-208ENST00000428555 TLE2Q04725 743 aa11.05□□□□□ -0.64
TRIM39-208ENST00000428555 COL9A3Q14050 684 aaPredicted RBP11.05□□□□□ -0.64
TRIM39-208ENST00000428555 WTAPQ15007 396 aa11.05□□□□□ -0.64
TRIM39-208ENST00000428555 NECTIN1Q15223 517 aa11.05□□□□□ -0.64
TRIM39-208ENST00000428555 QRICH1Q2TAL8 776 aa11.05□□□□□ -0.64
TRIM39-208ENST00000428555 TMEM67Q5HYA8 995 aa11.05□□□□□ -0.64
TRIM39-208ENST00000428555 GNASQ5JWF2 1037 aa11.05□□□□□ -0.64
TRIM39-208ENST00000428555 CCSAPQ6IQ19 270 aaPredicted RBP11.05□□□□□ -0.64
TRIM39-208ENST00000428555 TAPT1Q6NXT6 567 aa11.05□□□□□ -0.64
TRIM39-208ENST00000428555 SLC30A10Q6XR72 485 aa11.05□□□□□ -0.64
TRIM39-208ENST00000428555 MB21D2Q8IYB1 491 aaPredicted RBP11.05□□□□□ -0.64
TRIM39-208ENST00000428555 RGS22Q8NE09 1264 aa11.05□□□□□ -0.64
TRIM39-208ENST00000428555 TSEN34Q9BSV6 310 aaKnown RBP11.05□□□□□ -0.64
TRIM39-208ENST00000428555 ANO2Q9NQ90 1003 aa11.05□□□□□ -0.64
TRIM39-208ENST00000428555 GPHNQ9NQX3 736 aaPredicted RBP11.05□□□□□ -0.64
TRIM39-208ENST00000428555 ADD3Q9UEY8 706 aaKnown RBP11.05□□□□□ -0.64
TRIM39-208ENST00000428555 ZNFX1Q9P2E3 1918 aaKnown RBP11.05□□□□□ -0.64
TRIM39-208ENST00000428555 SYNRGQ9UMZ2 1314 aa11.05□□□□□ -0.64
TRIM39-208ENST00000428555 SMCHD1A6NHR9 2005 aa11.04□□□□□ -0.64
TRIM39-208ENST00000428555 A0A1W2PQ45 241 aaPredicted RBP11.04□□□□□ -0.64
TRIM39-208ENST00000428555 A0A1W2PQY0 241 aa11.04□□□□□ -0.64
TRIM39-208ENST00000428555 CTAGE5O15320 804 aa11.04□□□□□ -0.64
TRIM39-208ENST00000428555 DYNC1LI2O43237 492 aaPredicted RBP11.04□□□□□ -0.64
TRIM39-208ENST00000428555 SMPD1P17405 629 aa11.04□□□□□ -0.64
TRIM39-208ENST00000428555 BMP8BP34820 402 aa11.04□□□□□ -0.64
TRIM39-208ENST00000428555 ALDH5A1P51649 535 aaPredicted RBP11.04□□□□□ -0.64
TRIM39-208ENST00000428555 GJA9P57773 515 aa11.04□□□□□ -0.64
TRIM39-208ENST00000428555 MDM2Q00987 491 aaPredicted RBP11.04□□□□□ -0.64
TRIM39-208ENST00000428555 SART3Q15020 963 aaKnown RBP11.04□□□□□ -0.64
TRIM39-208ENST00000428555 SLC35G1Q2M3R5 365 aa11.04□□□□□ -0.64
TRIM39-208ENST00000428555 TRIM60Q495X7 471 aa11.04□□□□□ -0.64
TRIM39-208ENST00000428555 CREB3L3Q68CJ9 461 aa11.04□□□□□ -0.64
TRIM39-208ENST00000428555 IQSEC1Q6DN90 963 aa11.04□□□□□ -0.64
TRIM39-208ENST00000428555 FBXO11Q86XK2 927 aa11.04□□□□□ -0.64
TRIM39-208ENST00000428555 FBXO16Q8IX29 292 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms