RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 TMOD2Q9NZR1 351 aa10.49□□□□□ -0.73
SMAD9-203ENST00000399275 SBNO1A3KN83 1393 aa10.49□□□□□ -0.73
SMAD9-203ENST00000399275 ADCY3O60266 1144 aa10.48□□□□□ -0.73
SMAD9-203ENST00000399275 SUPT3HO75486 399 aa10.48□□□□□ -0.73
SMAD9-203ENST00000399275 MCF2P10911 925 aa10.48□□□□□ -0.73
SMAD9-203ENST00000399275 MCM7P33993 719 aa10.48□□□□□ -0.73
SMAD9-203ENST00000399275 CPSF1Q10570 1443 aaKnown RBP10.48□□□□□ -0.73
SMAD9-203ENST00000399275 FAM43BQ6ZT52 329 aaPredicted RBP10.48□□□□□ -0.73
SMAD9-203ENST00000399275 VSTM4Q8IW00 320 aa10.48□□□□□ -0.73
SMAD9-203ENST00000399275 MRRFQ96E11 262 aaKnown RBP10.48□□□□□ -0.73
SMAD9-203ENST00000399275 NR1H4Q96RI1 486 aaPredicted RBP10.48□□□□□ -0.73
SMAD9-203ENST00000399275 PHF8Q9UPP1 1060 aa10.48□□□□□ -0.73
SMAD9-203ENST00000399275 ATP6V0A2Q9Y487 856 aa10.48□□□□□ -0.73
SMAD9-203ENST00000399275 ADCY9O60503 1353 aa10.48□□□□□ -0.73
SMAD9-203ENST00000399275 A0A1B0GW55 424 aa10.48□□□□□ -0.73
SMAD9-203ENST00000399275 PABPN1LA6NDY0 278 aaKnown RBP10.48□□□□□ -0.73
SMAD9-203ENST00000399275 DUX4L2P0CJ85 424 aa10.48□□□□□ -0.73
SMAD9-203ENST00000399275 DUX4L3P0CJ86 424 aa10.48□□□□□ -0.73
SMAD9-203ENST00000399275 DUX4L4P0CJ87 422 aa10.48□□□□□ -0.73
SMAD9-203ENST00000399275 DUX4L5P0CJ88 424 aa10.48□□□□□ -0.73
SMAD9-203ENST00000399275 DUX4L6P0CJ89 424 aa10.48□□□□□ -0.73
SMAD9-203ENST00000399275 DUX4L7P0CJ90 424 aa10.48□□□□□ -0.73
SMAD9-203ENST00000399275 ADCK5Q3MIX3 580 aa10.48□□□□□ -0.73
SMAD9-203ENST00000399275 OTUD7BQ6GQQ9 843 aa10.48□□□□□ -0.73
SMAD9-203ENST00000399275 RINLQ6ZS11 566 aa10.48□□□□□ -0.73
SMAD9-203ENST00000399275 APLFQ8IW19 511 aaPredicted RBP10.48□□□□□ -0.73
SMAD9-203ENST00000399275 ZNF444Q8N0Y2 327 aaPredicted RBP10.48□□□□□ -0.73
SMAD9-203ENST00000399275 OR8K1Q8NGG5 319 aa10.48□□□□□ -0.73
SMAD9-203ENST00000399275 LZICQ8WZA0 190 aa10.48□□□□□ -0.73
SMAD9-203ENST00000399275 DUX4Q9UBX2 424 aa10.48□□□□□ -0.73
SMAD9-203ENST00000399275 TRPC5Q9UL62 973 aaPredicted RBP10.48□□□□□ -0.73
SMAD9-203ENST00000399275 DDHD2O94830 711 aa10.48□□□□□ -0.73
SMAD9-203ENST00000399275 SERPINB3P29508 390 aa10.48□□□□□ -0.73
SMAD9-203ENST00000399275 Q4G0T1 1027 aa10.48□□□□□ -0.73
SMAD9-203ENST00000399275 TMC5Q6UXY8 1006 aa10.48□□□□□ -0.73
SMAD9-203ENST00000399275 STXBP4Q6ZWJ1 553 aa10.48□□□□□ -0.73
SMAD9-203ENST00000399275 TEX9Q8N6V9 391 aa10.48□□□□□ -0.73
SMAD9-203ENST00000399275 SDCCAG3Q96C92 435 aa10.48□□□□□ -0.73
SMAD9-203ENST00000399275 CHMP2BQ9UQN3 213 aa10.48□□□□□ -0.73
SMAD9-203ENST00000399275 SMAPO00193 183 aa10.48□□□□□ -0.73
SMAD9-203ENST00000399275 PPP6R2O75170 966 aa10.48□□□□□ -0.73
SMAD9-203ENST00000399275 MSH2P43246 934 aa10.48□□□□□ -0.73
SMAD9-203ENST00000399275 USP5P45974 858 aa10.48□□□□□ -0.73
SMAD9-203ENST00000399275 RNASE9P60153 205 aaKnown RBP10.48□□□□□ -0.73
SMAD9-203ENST00000399275 DHX9Q08211 1270 aaKnown RBP10.48□□□□□ -0.73
SMAD9-203ENST00000399275 PPP2R5BQ15173 497 aa10.48□□□□□ -0.73
SMAD9-203ENST00000399275 DTHD1Q6ZMT9 781 aa10.48□□□□□ -0.73
SMAD9-203ENST00000399275 KLHL7Q8IXQ5 586 aa10.48□□□□□ -0.73
SMAD9-203ENST00000399275 KCNV2Q8TDN2 545 aa10.48□□□□□ -0.73
SMAD9-203ENST00000399275 KCNF1Q9H3M0 494 aa10.48□□□□□ -0.73
SMAD9-203ENST00000399275 INTS9Q9NV88 658 aaKnown RBP10.48□□□□□ -0.73
SMAD9-203ENST00000399275 HDAC9Q9UKV0 1011 aa10.48□□□□□ -0.73
SMAD9-203ENST00000399275 SSX2IPQ9Y2D8 614 aa10.48□□□□□ -0.73
SMAD9-203ENST00000399275 RWDD3Q9Y3V2 267 aa10.48□□□□□ -0.73
SMAD9-203ENST00000399275 SLC4A4Q9Y6R1 1079 aa10.48□□□□□ -0.73
SMAD9-203ENST00000399275 AATKQ6ZMQ8 1374 aa10.48□□□□□ -0.73
SMAD9-203ENST00000399275 RESTQ13127 1097 aa10.48□□□□□ -0.73
SMAD9-203ENST00000399275 SPATA1Q5VX52 437 aa10.48□□□□□ -0.73
SMAD9-203ENST00000399275 UNC5CLQ8IV45 518 aa10.48□□□□□ -0.73
SMAD9-203ENST00000399275 DIS3L2Q8IYB7 885 aaKnown RBP10.48□□□□□ -0.73
SMAD9-203ENST00000399275 VPS37BQ9H9H4 285 aa10.48□□□□□ -0.73
SMAD9-203ENST00000399275 PRDM4Q9UKN5 801 aa10.48□□□□□ -0.73
SMAD9-203ENST00000399275 A0A0D9SFI3 127 aa10.47□□□□□ -0.73
SMAD9-203ENST00000399275 DPCR1Q3MIW9 517 aa10.47□□□□□ -0.73
SMAD9-203ENST00000399275 NFRKBQ6P4R8 1299 aa10.47□□□□□ -0.73
SMAD9-203ENST00000399275 TTLL11Q8NHH1 800 aa10.47□□□□□ -0.73
SMAD9-203ENST00000399275 TAB2Q9NYJ8 693 aa10.47□□□□□ -0.73
SMAD9-203ENST00000399275 GIPC1O14908 333 aa10.47□□□□□ -0.73
SMAD9-203ENST00000399275 ZNF76P36508 570 aa10.47□□□□□ -0.73
SMAD9-203ENST00000399275 KCNJ6P48051 423 aa10.47□□□□□ -0.73
SMAD9-203ENST00000399275 SCRN1Q12765 414 aa10.47□□□□□ -0.73
SMAD9-203ENST00000399275 SFSWAPQ12872 951 aaKnown RBP10.47□□□□□ -0.73
SMAD9-203ENST00000399275 SEL1L2Q5TEA6 688 aa10.47□□□□□ -0.73
SMAD9-203ENST00000399275 JARID2Q92833 1246 aaPredicted RBP10.47□□□□□ -0.73
SMAD9-203ENST00000399275 MTA3Q9BTC8 594 aa10.47□□□□□ -0.73
SMAD9-203ENST00000399275 TEX13AQ9BXU3 409 aaPredicted RBP10.47□□□□□ -0.73
SMAD9-203ENST00000399275 ATP7AQ04656 1500 aa10.47□□□□□ -0.73
SMAD9-203ENST00000399275 VWA3AA6NCI4 1184 aa10.47□□□□□ -0.73
SMAD9-203ENST00000399275 TCP1P17987 556 aaKnown RBP10.47□□□□□ -0.73
SMAD9-203ENST00000399275 PAPOLAP51003 745 aaKnown RBP10.47□□□□□ -0.73
SMAD9-203ENST00000399275 GRAMD1BQ3KR37 738 aa10.47□□□□□ -0.73
SMAD9-203ENST00000399275 TOM1L2Q6ZVM7 507 aa10.47□□□□□ -0.73
SMAD9-203ENST00000399275 HDDC2Q7Z4H3 204 aa10.47□□□□□ -0.73
SMAD9-203ENST00000399275 TRMT44Q8IYL2 757 aaKnown RBP10.47□□□□□ -0.73
SMAD9-203ENST00000399275 THAP11Q96EK4 314 aa10.47□□□□□ -0.73
SMAD9-203ENST00000399275 SERTAD1Q9UHV2 236 aa10.47□□□□□ -0.73
SMAD9-203ENST00000399275 AMOTL2Q9Y2J4 779 aa10.47□□□□□ -0.73
SMAD9-203ENST00000399275 HYOU1Q9Y4L1 999 aa10.47□□□□□ -0.73
SMAD9-203ENST00000399275 H0Y3Z8 333 aa10.47□□□□□ -0.73
SMAD9-203ENST00000399275 KLC1Q07866 573 aa10.47□□□□□ -0.73
SMAD9-203ENST00000399275 GOLGA8FQ08AF8 430 aa10.47□□□□□ -0.73
SMAD9-203ENST00000399275 GOLGA8DPQ0D2H9 430 aa10.47□□□□□ -0.73
SMAD9-203ENST00000399275 CASP8Q14790 479 aa10.47□□□□□ -0.73
SMAD9-203ENST00000399275 FBXW10Q5XX13 1052 aa10.47□□□□□ -0.73
SMAD9-203ENST00000399275 RSBN1LQ6PCB5 846 aaPredicted RBP10.47□□□□□ -0.73
SMAD9-203ENST00000399275 ANKLE2Q86XL3 938 aa10.47□□□□□ -0.73
SMAD9-203ENST00000399275 APPBP2Q92624 585 aa10.47□□□□□ -0.73
SMAD9-203ENST00000399275 TUBB6Q9BUF5 446 aa10.47□□□□□ -0.73
SMAD9-203ENST00000399275 DEAF1O75398 565 aaPredicted RBP10.46□□□□□ -0.73
SMAD9-203ENST00000399275 KIF23Q02241 960 aaPredicted RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms