RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 MAF1Q9H063 256 aa16.98■□□□□ 0.31
SEC13-208ENST00000397109 FAM184BQ9ULE4 1060 aa16.98■□□□□ 0.31
SEC13-208ENST00000397109 KBTBD13C9JR72 458 aa16.97■□□□□ 0.31
SEC13-208ENST00000397109 DHX16O60231 1041 aaKnown RBP16.97■□□□□ 0.31
SEC13-208ENST00000397109 ACVR2BQ13705 512 aa16.97■□□□□ 0.31
SEC13-208ENST00000397109 ANO1Q5XXA6 986 aa16.97■□□□□ 0.31
SEC13-208ENST00000397109 ARMCX2Q7L311 632 aa16.97■□□□□ 0.31
SEC13-208ENST00000397109 ZHX1Q9UKY1 873 aaPredicted RBP16.97■□□□□ 0.31
SEC13-208ENST00000397109 LOC102724159A0A0B4J2E5 919 aa16.96■□□□□ 0.31
SEC13-208ENST00000397109 SOWAHBA6NEL2 793 aa16.96■□□□□ 0.31
SEC13-208ENST00000397109 KLRF2D3W0D1 207 aa16.96■□□□□ 0.31
SEC13-208ENST00000397109 H0YGN5 161 aa16.96■□□□□ 0.31
SEC13-208ENST00000397109 MCM5P33992 734 aa16.96■□□□□ 0.31
SEC13-208ENST00000397109 BAATQ14032 418 aaPredicted RBP16.96■□□□□ 0.31
SEC13-208ENST00000397109 PWP2Q15269 919 aaKnown RBP16.96■□□□□ 0.31
SEC13-208ENST00000397109 CDC37Q16543 378 aaPredicted RBP16.96■□□□□ 0.31
SEC13-208ENST00000397109 CHST3Q7LGC8 479 aa16.96■□□□□ 0.31
SEC13-208ENST00000397109 CATIPQ7Z7H3 387 aa16.96■□□□□ 0.31
SEC13-208ENST00000397109 CCDC144CPQ8IYA2 1237 aa16.96■□□□□ 0.31
SEC13-208ENST00000397109 TMTC2Q8N394 836 aa16.96■□□□□ 0.31
SEC13-208ENST00000397109 IGDCC4Q8TDY8 1250 aa16.96■□□□□ 0.31
SEC13-208ENST00000397109 CLEC4DQ8WXI8 215 aa16.96■□□□□ 0.31
SEC13-208ENST00000397109 CPVLQ9H3G5 476 aa16.96■□□□□ 0.31
SEC13-208ENST00000397109 XPNPEP3Q9NQH7 507 aa16.96■□□□□ 0.31
SEC13-208ENST00000397109 ADD3Q9UEY8 706 aaKnown RBP16.96■□□□□ 0.31
SEC13-208ENST00000397109 MCM3APO60318 1980 aa16.96■□□□□ 0.31
SEC13-208ENST00000397109 ABCB11O95342 1321 aa16.95■□□□□ 0.3
SEC13-208ENST00000397109 PALM3A6NDB9 673 aaPredicted RBP16.95■□□□□ 0.3
SEC13-208ENST00000397109 NFIBO00712 420 aa16.95■□□□□ 0.3
SEC13-208ENST00000397109 EIF5BO60841 1220 aaKnown RBP16.95■□□□□ 0.3
SEC13-208ENST00000397109 ANTXR2P58335 489 aa16.95■□□□□ 0.3
SEC13-208ENST00000397109 GRM4Q14833 912 aa16.95■□□□□ 0.3
SEC13-208ENST00000397109 LRRC41Q15345 812 aa16.95■□□□□ 0.3
SEC13-208ENST00000397109 GJC2Q5T442 439 aaPredicted RBP16.95■□□□□ 0.3
SEC13-208ENST00000397109 RNF180Q86T96 592 aa16.95■□□□□ 0.3
SEC13-208ENST00000397109 RGS22Q8NE09 1264 aa16.95■□□□□ 0.3
SEC13-208ENST00000397109 TMEM87BQ96K49 555 aa16.95■□□□□ 0.3
SEC13-208ENST00000397109 SENP6Q9GZR1 1112 aaPredicted RBP16.95■□□□□ 0.3
SEC13-208ENST00000397109 JMJD4Q9H9V9 463 aa16.95■□□□□ 0.3
SEC13-208ENST00000397109 VAT1LQ9HCJ6 419 aa16.95■□□□□ 0.3
SEC13-208ENST00000397109 MAD2L2Q9UI95 211 aa16.95■□□□□ 0.3
SEC13-208ENST00000397109 PTPDC1A2A3K4 754 aa16.94■□□□□ 0.3
SEC13-208ENST00000397109 PRC1O43663 620 aa16.94■□□□□ 0.3
SEC13-208ENST00000397109 USH1GQ495M9 461 aa16.94■□□□□ 0.3
SEC13-208ENST00000397109 RNF207Q6ZRF8 634 aa16.94■□□□□ 0.3
SEC13-208ENST00000397109 FBXO11Q86XK2 927 aa16.94■□□□□ 0.3
SEC13-208ENST00000397109 STAG2Q8N3U4 1231 aa16.94■□□□□ 0.3
SEC13-208ENST00000397109 MAP3K14Q99558 947 aa16.94■□□□□ 0.3
SEC13-208ENST00000397109 DUSP11O75319 330 aaKnown RBP16.93■□□□□ 0.3
SEC13-208ENST00000397109 MYCNP04198 464 aaPredicted RBP16.93■□□□□ 0.3
SEC13-208ENST00000397109 TROAPQ12815 778 aa16.93■□□□□ 0.3
SEC13-208ENST00000397109 TRAF1Q13077 416 aa16.93■□□□□ 0.3
SEC13-208ENST00000397109 QRICH1Q2TAL8 776 aa16.93■□□□□ 0.3
SEC13-208ENST00000397109 MCF2L2Q86YR7 1114 aa16.93■□□□□ 0.3
SEC13-208ENST00000397109 MPHOSPH6Q99547 160 aaKnown RBP16.93■□□□□ 0.3
SEC13-208ENST00000397109 MRPL11Q9Y3B7 192 aaKnown RBP16.93■□□□□ 0.3
SEC13-208ENST00000397109 MYH6P13533 1939 aa16.93■□□□□ 0.3
SEC13-208ENST00000397109 B4DLN1 442 aa16.93■□□□□ 0.3
SEC13-208ENST00000397109 CALML3P27482 149 aa16.93■□□□□ 0.3
SEC13-208ENST00000397109 MRPL12P52815 198 aaKnown RBP16.93■□□□□ 0.3
SEC13-208ENST00000397109 RPS6P62753 249 aaKnown RBP16.93■□□□□ 0.3
SEC13-208ENST00000397109 CCDC144BQ3MJ40 725 aa16.93■□□□□ 0.3
SEC13-208ENST00000397109 TSGA10IPQ3SY00 556 aa16.93■□□□□ 0.3
SEC13-208ENST00000397109 DNERQ8NFT8 737 aa16.93■□□□□ 0.3
SEC13-208ENST00000397109 MORC4Q8TE76 937 aa16.93■□□□□ 0.3
SEC13-208ENST00000397109 MTMR8Q96EF0 704 aa16.93■□□□□ 0.3
SEC13-208ENST00000397109 TSEN34Q9BSV6 310 aaKnown RBP16.93■□□□□ 0.3
SEC13-208ENST00000397109 AMNQ9BXJ7 453 aa16.93■□□□□ 0.3
SEC13-208ENST00000397109 KATNBL1Q9H079 304 aa16.93■□□□□ 0.3
SEC13-208ENST00000397109 LY9Q9HBG7 655 aa16.93■□□□□ 0.3
SEC13-208ENST00000397109 SPC25Q9HBM1 224 aa16.93■□□□□ 0.3
SEC13-208ENST00000397109 SENP2Q9HC62 589 aa16.93■□□□□ 0.3
SEC13-208ENST00000397109 ALPK3Q96L96 1907 aa16.92■□□□□ 0.3
SEC13-208ENST00000397109 ASTN1O14525 1302 aa16.92■□□□□ 0.3
SEC13-208ENST00000397109 DDAH1O94760 285 aa16.92■□□□□ 0.3
SEC13-208ENST00000397109 PGK1P00558 417 aa16.92■□□□□ 0.3
SEC13-208ENST00000397109 KIF5BP33176 963 aa16.92■□□□□ 0.3
SEC13-208ENST00000397109 LIFRP42702 1097 aa16.92■□□□□ 0.3
SEC13-208ENST00000397109 ALDH5A1P51649 535 aaPredicted RBP16.92■□□□□ 0.3
SEC13-208ENST00000397109 KRT32Q14532 448 aa16.92■□□□□ 0.3
SEC13-208ENST00000397109 LRRC26Q2I0M4 334 aa16.92■□□□□ 0.3
SEC13-208ENST00000397109 NFXL1Q6ZNB6 911 aa16.92■□□□□ 0.3
SEC13-208ENST00000397109 C7orf61Q8IZ16 206 aa16.92■□□□□ 0.3
SEC13-208ENST00000397109 IPO9Q96P70 1041 aaKnown RBP16.92■□□□□ 0.3
SEC13-208ENST00000397109 RIOX1Q9H6W3 641 aa16.92■□□□□ 0.3
SEC13-208ENST00000397109 VTA1Q9NP79 307 aa16.92■□□□□ 0.3
SEC13-208ENST00000397109 BAZ2BQ9UIF8 2168 aaKnown RBP16.91■□□□□ 0.3
SEC13-208ENST00000397109 CCDC69A6NI79 296 aa16.91■□□□□ 0.3
SEC13-208ENST00000397109 SH2B2O14492 632 aaPredicted RBP16.91■□□□□ 0.3
SEC13-208ENST00000397109 ZBTB5O15062 677 aa16.91■□□□□ 0.3
SEC13-208ENST00000397109 ADAMTS4O75173 837 aa16.91■□□□□ 0.3
SEC13-208ENST00000397109 SLC30A10Q6XR72 485 aa16.91■□□□□ 0.3
SEC13-208ENST00000397109 ZNF654Q8IZM8 581 aa16.91■□□□□ 0.3
SEC13-208ENST00000397109 CTCFLQ8NI51 663 aaPredicted RBP16.91■□□□□ 0.3
SEC13-208ENST00000397109 NUP133Q8WUM0 1156 aa16.91■□□□□ 0.3
SEC13-208ENST00000397109 NEK1Q96PY6 1258 aa16.91■□□□□ 0.3
SEC13-208ENST00000397109 PHF24Q9UPV7 400 aa16.91■□□□□ 0.3
SEC13-208ENST00000397109 EPB41L2O43491 1005 aaKnown RBP16.9■□□□□ 0.3
SEC13-208ENST00000397109 REC8O95072 547 aa16.9■□□□□ 0.3
SEC13-208ENST00000397109 CALM1P0DP23 149 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms