RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 IL1RAPL2Q9NP60 686 aa8.3□□□□□ -1.08
CDKL5-201ENST00000379989 GALNT8Q9NY28 637 aa8.3□□□□□ -1.08
CDKL5-201ENST00000379989 FAM184BQ9ULE4 1060 aa8.3□□□□□ -1.08
CDKL5-201ENST00000379989 TMEM98Q9Y2Y6 226 aa8.3□□□□□ -1.08
CDKL5-201ENST00000379989 DDX60Q8IY21 1712 aaKnown RBP8.3□□□□□ -1.08
CDKL5-201ENST00000379989 E7EVH7 732 aa8.3□□□□□ -1.08
CDKL5-201ENST00000379989 STXBP3O00186 592 aa8.3□□□□□ -1.08
CDKL5-201ENST00000379989 CNGA1P29973 690 aa8.3□□□□□ -1.08
CDKL5-201ENST00000379989 MXRA7P84157 204 aa8.3□□□□□ -1.08
CDKL5-201ENST00000379989 SND1Q7KZF4 910 aaKnown RBP eCLIP8.3□□□□□ -1.08
CDKL5-201ENST00000379989 EAF2Q96CJ1 260 aaPredicted RBP8.3□□□□□ -1.08
CDKL5-201ENST00000379989 UNC45AQ9H3U1 944 aa8.3□□□□□ -1.08
CDKL5-201ENST00000379989 ZNF652Q9Y2D9 606 aa8.3□□□□□ -1.08
CDKL5-201ENST00000379989 LAMA4Q16363 1823 aa8.29□□□□□ -1.08
CDKL5-201ENST00000379989 CYP19A1P11511 503 aaPredicted RBP8.29□□□□□ -1.08
CDKL5-201ENST00000379989 PABPC4Q13310 644 aaKnown RBP eCLIP8.29□□□□□ -1.08
CDKL5-201ENST00000379989 BYSLQ13895 437 aaKnown RBP8.29□□□□□ -1.08
CDKL5-201ENST00000379989 NECTIN1Q15223 517 aa8.29□□□□□ -1.08
CDKL5-201ENST00000379989 PPP1R7Q15435 360 aa8.29□□□□□ -1.08
CDKL5-201ENST00000379989 UBE3BQ7Z3V4 1068 aa8.29□□□□□ -1.08
CDKL5-201ENST00000379989 KBTBD3Q8NAB2 608 aa8.29□□□□□ -1.08
CDKL5-201ENST00000379989 PIGBQ92521 554 aa8.29□□□□□ -1.08
CDKL5-201ENST00000379989 USP28Q96RU2 1077 aa8.29□□□□□ -1.08
CDKL5-201ENST00000379989 MMS19Q96T76 1030 aa8.29□□□□□ -1.08
CDKL5-201ENST00000379989 NDST4Q9H3R1 872 aa8.29□□□□□ -1.08
CDKL5-201ENST00000379989 UBN2Q6ZU65 1347 aa8.29□□□□□ -1.08
CDKL5-201ENST00000379989 LRRD1A4D1F6 860 aa8.29□□□□□ -1.08
CDKL5-201ENST00000379989 JAK2O60674 1132 aa8.29□□□□□ -1.08
CDKL5-201ENST00000379989 PARP1P09874 1014 aaKnown RBP8.29□□□□□ -1.08
CDKL5-201ENST00000379989 NNTQ13423 1086 aa8.29□□□□□ -1.08
CDKL5-201ENST00000379989 EMC10Q5UCC4 262 aa8.29□□□□□ -1.08
CDKL5-201ENST00000379989 TSEN2Q8NCE0 465 aaKnown RBP8.29□□□□□ -1.08
CDKL5-201ENST00000379989 HVCN1Q96D96 273 aa8.29□□□□□ -1.08
CDKL5-201ENST00000379989 STRN4Q9NRL3 753 aa8.29□□□□□ -1.08
CDKL5-201ENST00000379989 CEP126Q9P2H0 1117 aa8.29□□□□□ -1.08
CDKL5-201ENST00000379989 NHSQ6T4R5 1651 aa8.29□□□□□ -1.08
CDKL5-201ENST00000379989 THSD7AQ9UPZ6 1657 aa8.29□□□□□ -1.08
CDKL5-201ENST00000379989 ZMYM6O95789 1325 aa8.29□□□□□ -1.08
CDKL5-201ENST00000379989 ATRNO75882 1429 aa8.29□□□□□ -1.08
CDKL5-201ENST00000379989 UQCRFS1P1P0C7P4 283 aa8.28□□□□□ -1.08
CDKL5-201ENST00000379989 MDH1P40925 334 aaKnown RBP8.28□□□□□ -1.08
CDKL5-201ENST00000379989 NDUFA8P51970 172 aa8.28□□□□□ -1.08
CDKL5-201ENST00000379989 ADAM9Q13443 819 aa8.28□□□□□ -1.08
CDKL5-201ENST00000379989 VPS72Q15906 364 aa8.28□□□□□ -1.08
CDKL5-201ENST00000379989 ENOX2Q16206 610 aaKnown RBP8.28□□□□□ -1.08
CDKL5-201ENST00000379989 INF2Q27J81 1249 aa8.28□□□□□ -1.08
CDKL5-201ENST00000379989 CCDC38Q502W7 563 aa8.28□□□□□ -1.08
CDKL5-201ENST00000379989 RC3H1Q5TC82 1133 aaKnown RBP8.28□□□□□ -1.08
CDKL5-201ENST00000379989 CNBD1Q8NA66 436 aa8.28□□□□□ -1.08
CDKL5-201ENST00000379989 MAIP1Q8WWC4 291 aa8.28□□□□□ -1.08
CDKL5-201ENST00000379989 PANK4Q9NVE7 773 aa8.28□□□□□ -1.08
CDKL5-201ENST00000379989 LEMD3Q9Y2U8 911 aa8.28□□□□□ -1.08
CDKL5-201ENST00000379989 MROH5Q6ZUA9 1318 aa8.28□□□□□ -1.08
CDKL5-201ENST00000379989 RIC1Q4ADV7 1423 aa8.28□□□□□ -1.08
CDKL5-201ENST00000379989 PRAMEF22A3QJZ6 481 aa8.28□□□□□ -1.08
CDKL5-201ENST00000379989 PPIP5K2O43314 1243 aa8.28□□□□□ -1.08
CDKL5-201ENST00000379989 PDE8AO60658 829 aa8.28□□□□□ -1.08
CDKL5-201ENST00000379989 ANXA1P04083 346 aa8.28□□□□□ -1.08
CDKL5-201ENST00000379989 ME1P48163 572 aa8.28□□□□□ -1.08
CDKL5-201ENST00000379989 MYL5Q02045 173 aa8.28□□□□□ -1.08
CDKL5-201ENST00000379989 PTH1RQ03431 593 aa8.28□□□□□ -1.08
CDKL5-201ENST00000379989 DYNC1I2Q13409 638 aaKnown RBP8.28□□□□□ -1.08
CDKL5-201ENST00000379989 DDB1Q16531 1140 aa8.28□□□□□ -1.08
CDKL5-201ENST00000379989 QPCTQ16769 361 aa8.28□□□□□ -1.08
CDKL5-201ENST00000379989 ZMYM1Q5SVZ6 1142 aa8.28□□□□□ -1.08
CDKL5-201ENST00000379989 ALS2CLQ60I27 953 aa8.28□□□□□ -1.08
CDKL5-201ENST00000379989 SPECC1LQ69YQ0 1117 aa8.28□□□□□ -1.08
CDKL5-201ENST00000379989 EHBP1Q8NDI1 1231 aa8.28□□□□□ -1.08
CDKL5-201ENST00000379989 CCT6BQ92526 530 aa8.28□□□□□ -1.08
CDKL5-201ENST00000379989 MRPS27Q92552 414 aaKnown RBP8.28□□□□□ -1.08
CDKL5-201ENST00000379989 MYH8P13535 1937 aa8.28□□□□□ -1.08
CDKL5-201ENST00000379989 TMEM221A6NGB7 291 aa8.28□□□□□ -1.08
CDKL5-201ENST00000379989 SRRM3A6NNA2 597 aaPredicted RBP8.28□□□□□ -1.08
CDKL5-201ENST00000379989 SLC3A2P08195 630 aaKnown RBP8.28□□□□□ -1.08
CDKL5-201ENST00000379989 CLTAP09496 248 aa8.28□□□□□ -1.08
CDKL5-201ENST00000379989 MAP3K12Q12852 859 aa8.28□□□□□ -1.08
CDKL5-201ENST00000379989 MCMDC2Q4G0Z9 681 aa8.28□□□□□ -1.08
CDKL5-201ENST00000379989 ANKRD20A2Q5SQ80 823 aa8.28□□□□□ -1.08
CDKL5-201ENST00000379989 ANKRD20A1Q5TYW2 823 aa8.28□□□□□ -1.08
CDKL5-201ENST00000379989 ANKRD20A3Q5VUR7 823 aa8.28□□□□□ -1.08
CDKL5-201ENST00000379989 LMBR1LQ6UX01 489 aa8.28□□□□□ -1.08
CDKL5-201ENST00000379989 RASGRP2Q7LDG7 609 aa8.28□□□□□ -1.08
CDKL5-201ENST00000379989 KCNV2Q8TDN2 545 aa8.28□□□□□ -1.08
CDKL5-201ENST00000379989 MTA3Q9BTC8 594 aa8.28□□□□□ -1.08
CDKL5-201ENST00000379989 SCN7AQ01118 1682 aa8.28□□□□□ -1.08
CDKL5-201ENST00000379989 KRT14P02533 472 aa8.27□□□□□ -1.08
CDKL5-201ENST00000379989 ALADP13716 330 aa8.27□□□□□ -1.08
CDKL5-201ENST00000379989 NR1D1P20393 614 aa8.27□□□□□ -1.08
CDKL5-201ENST00000379989 STK3Q13188 491 aa8.27□□□□□ -1.08
CDKL5-201ENST00000379989 IFIT5Q13325 482 aaKnown RBP8.27□□□□□ -1.08
CDKL5-201ENST00000379989 ANO7Q6IWH7 933 aa8.27□□□□□ -1.08
CDKL5-201ENST00000379989 TRAPPC11Q7Z392 1133 aa8.27□□□□□ -1.08
CDKL5-201ENST00000379989 TMEM110Q86TL2 294 aa8.27□□□□□ -1.08
CDKL5-201ENST00000379989 TEX9Q8N6V9 391 aa8.27□□□□□ -1.08
CDKL5-201ENST00000379989 C8orf76Q96K31 380 aa8.27□□□□□ -1.08
CDKL5-201ENST00000379989 TCEANC2Q96MN5 208 aa8.27□□□□□ -1.08
CDKL5-201ENST00000379989 HINFPQ9BQA5 517 aa8.27□□□□□ -1.08
CDKL5-201ENST00000379989 SYT15Q9BQS2 421 aa8.27□□□□□ -1.08
CDKL5-201ENST00000379989 LLPHQ9BRT6 129 aaKnown RBP8.27□□□□□ -1.08
CDKL5-201ENST00000379989 FSD1Q9BTV5 496 aa8.27□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms