RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 FOXP1Q9H334 677 aaPredicted RBP9.15□□□□□ -0.94
GARNL3-201ENST00000373386 IFT122Q9HBG6 1241 aa9.15□□□□□ -0.94
GARNL3-201ENST00000373386 C6orf203Q9P0P8 240 aaPredicted RBP9.15□□□□□ -0.94
GARNL3-201ENST00000373386 MAPK8IP1Q9UQF2 711 aa9.15□□□□□ -0.94
GARNL3-201ENST00000373386 KIF28PB7ZC32 967 aa9.15□□□□□ -0.95
GARNL3-201ENST00000373386 CEP104O60308 925 aa9.15□□□□□ -0.95
GARNL3-201ENST00000373386 PFKFB1P16118 471 aa9.15□□□□□ -0.95
GARNL3-201ENST00000373386 ENPP1P22413 925 aa9.15□□□□□ -0.95
GARNL3-201ENST00000373386 YY1P25490 414 aa9.15□□□□□ -0.95
GARNL3-201ENST00000373386 PIP4K2BP78356 416 aa9.15□□□□□ -0.95
GARNL3-201ENST00000373386 FANCCQ00597 558 aa9.15□□□□□ -0.95
GARNL3-201ENST00000373386 NCAPHQ15003 741 aa9.15□□□□□ -0.95
GARNL3-201ENST00000373386 NT5DC1Q5TFE4 455 aa9.15□□□□□ -0.95
GARNL3-201ENST00000373386 RCSD1Q6JBY9 416 aa9.15□□□□□ -0.95
GARNL3-201ENST00000373386 CYB5R4Q7L1T6 521 aa9.15□□□□□ -0.95
GARNL3-201ENST00000373386 CHST3Q7LGC8 479 aa9.15□□□□□ -0.95
GARNL3-201ENST00000373386 FCHSD1Q86WN1 690 aa9.15□□□□□ -0.95
GARNL3-201ENST00000373386 VPS37DQ86XT2 251 aa9.15□□□□□ -0.95
GARNL3-201ENST00000373386 HOMER1Q86YM7 354 aa9.15□□□□□ -0.95
GARNL3-201ENST00000373386 SLC4A9Q96Q91 983 aa9.15□□□□□ -0.95
GARNL3-201ENST00000373386 CDC5LQ99459 802 aaKnown RBP9.15□□□□□ -0.95
GARNL3-201ENST00000373386 RNF41Q9H4P4 317 aaPredicted RBP9.15□□□□□ -0.95
GARNL3-201ENST00000373386 RPAP3Q9H6T3 665 aaPredicted RBP9.15□□□□□ -0.95
GARNL3-201ENST00000373386 QPCTLQ9NXS2 382 aa9.15□□□□□ -0.95
GARNL3-201ENST00000373386 TRMT112Q9UI30 125 aaKnown RBP9.15□□□□□ -0.95
GARNL3-201ENST00000373386 CASZ1Q86V15 1759 aa9.15□□□□□ -0.95
GARNL3-201ENST00000373386 UBN2Q6ZU65 1347 aa9.14□□□□□ -0.95
GARNL3-201ENST00000373386 ETF1P62495 437 aaKnown RBP9.14□□□□□ -0.95
GARNL3-201ENST00000373386 PDE4BQ07343 736 aa9.14□□□□□ -0.95
GARNL3-201ENST00000373386 ERCC6LQ2NKX8 1250 aa9.14□□□□□ -0.95
GARNL3-201ENST00000373386 KRT40Q6A162 431 aa9.14□□□□□ -0.95
GARNL3-201ENST00000373386 SLF2Q8IX21 1173 aa9.14□□□□□ -0.95
GARNL3-201ENST00000373386 IFNL3Q8IZI9 196 aa9.14□□□□□ -0.95
GARNL3-201ENST00000373386 USP33Q8TEY7 942 aa9.14□□□□□ -0.95
GARNL3-201ENST00000373386 NUP133Q8WUM0 1156 aa9.14□□□□□ -0.95
GARNL3-201ENST00000373386 AIDAQ96BJ3 306 aa9.14□□□□□ -0.95
GARNL3-201ENST00000373386 NACAP1Q9BZK3 213 aa9.14□□□□□ -0.95
GARNL3-201ENST00000373386 COMMD8Q9NX08 183 aa9.14□□□□□ -0.95
GARNL3-201ENST00000373386 HOOK1Q9UJC3 728 aaKnown RBP9.14□□□□□ -0.95
GARNL3-201ENST00000373386 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.14□□□□□ -0.95
GARNL3-201ENST00000373386 CHUKO15111 745 aa9.14□□□□□ -0.95
GARNL3-201ENST00000373386 AHCYL1O43865 530 aa9.14□□□□□ -0.95
GARNL3-201ENST00000373386 POLR3DP05423 398 aaPredicted RBP9.14□□□□□ -0.95
GARNL3-201ENST00000373386 VIL1P09327 827 aaKnown RBP9.14□□□□□ -0.95
GARNL3-201ENST00000373386 IARSP41252 1262 aaKnown RBP9.14□□□□□ -0.95
GARNL3-201ENST00000373386 HAND2P61296 217 aa9.14□□□□□ -0.95
GARNL3-201ENST00000373386 TRIM29Q14134 588 aa9.14□□□□□ -0.95
GARNL3-201ENST00000373386 CLPPQ16740 277 aaPredicted RBP9.14□□□□□ -0.95
GARNL3-201ENST00000373386 Q4G0T1 1027 aa9.14□□□□□ -0.95
GARNL3-201ENST00000373386 IQCA1Q86XH1 822 aa9.14□□□□□ -0.95
GARNL3-201ENST00000373386 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.14□□□□□ -0.95
GARNL3-201ENST00000373386 FAM217BQ9NTX9 383 aaPredicted RBP9.14□□□□□ -0.95
GARNL3-201ENST00000373386 ATP6V0A2Q9Y487 856 aa9.14□□□□□ -0.95
GARNL3-201ENST00000373386 ZNF804BA4D1E1 1349 aa9.14□□□□□ -0.95
GARNL3-201ENST00000373386 BIN1O00499 593 aa9.14□□□□□ -0.95
GARNL3-201ENST00000373386 BBOX1O75936 387 aa9.14□□□□□ -0.95
GARNL3-201ENST00000373386 RPL13P26373 211 aaKnown RBP9.14□□□□□ -0.95
GARNL3-201ENST00000373386 TSR1Q2NL82 804 aaKnown RBP9.14□□□□□ -0.95
GARNL3-201ENST00000373386 CERKQ8TCT0 537 aa9.14□□□□□ -0.95
GARNL3-201ENST00000373386 MPHOSPH6Q99547 160 aaKnown RBP9.14□□□□□ -0.95
GARNL3-201ENST00000373386 EPAS1Q99814 870 aa9.14□□□□□ -0.95
GARNL3-201ENST00000373386 CAPS2Q9BXY5 557 aa9.14□□□□□ -0.95
GARNL3-201ENST00000373386 GPHNQ9NQX3 736 aaPredicted RBP9.14□□□□□ -0.95
GARNL3-201ENST00000373386 STRN4Q9NRL3 753 aa9.14□□□□□ -0.95
GARNL3-201ENST00000373386 TMCC3Q9ULS5 477 aa9.14□□□□□ -0.95
GARNL3-201ENST00000373386 FHOD1Q9Y613 1164 aa9.14□□□□□ -0.95
GARNL3-201ENST00000373386 LAMB1P07942 1786 aa9.13□□□□□ -0.95
GARNL3-201ENST00000373386 TMEM110-MUSTN1A8MSY1 372 aa9.13□□□□□ -0.95
GARNL3-201ENST00000373386 PDLIM1O00151 329 aa9.13□□□□□ -0.95
GARNL3-201ENST00000373386 MTRF1O75570 445 aaKnown RBP9.13□□□□□ -0.95
GARNL3-201ENST00000373386 SYKP43405 635 aa9.13□□□□□ -0.95
GARNL3-201ENST00000373386 PHKA1P46020 1223 aa9.13□□□□□ -0.95
GARNL3-201ENST00000373386 PLA2G4AP47712 749 aa9.13□□□□□ -0.95
GARNL3-201ENST00000373386 LMAN1P49257 510 aa9.13□□□□□ -0.95
GARNL3-201ENST00000373386 CLCN6P51797 869 aa9.13□□□□□ -0.95
GARNL3-201ENST00000373386 HDAC4P56524 1084 aa9.13□□□□□ -0.95
GARNL3-201ENST00000373386 SLC8A3P57103 927 aa9.13□□□□□ -0.95
GARNL3-201ENST00000373386 MYL5Q02045 173 aa9.13□□□□□ -0.95
GARNL3-201ENST00000373386 SSRP1Q08945 709 aaKnown RBP9.13□□□□□ -0.95
GARNL3-201ENST00000373386 RCN1Q15293 331 aa9.13□□□□□ -0.95
GARNL3-201ENST00000373386 ARHGAP29Q52LW3 1261 aa9.13□□□□□ -0.95
GARNL3-201ENST00000373386 RILPL1Q5EBL4 403 aa9.13□□□□□ -0.95
GARNL3-201ENST00000373386 RETREG2Q8NC44 543 aa9.13□□□□□ -0.95
GARNL3-201ENST00000373386 UBXN4Q92575 508 aa9.13□□□□□ -0.95
GARNL3-201ENST00000373386 ZBTB1Q9Y2K1 713 aa9.13□□□□□ -0.95
GARNL3-201ENST00000373386 UBAP1LF5GYI3 381 aa9.13□□□□□ -0.95
GARNL3-201ENST00000373386 ZSCAN12O43309 604 aa9.13□□□□□ -0.95
GARNL3-201ENST00000373386 MMP1P03956 469 aa9.13□□□□□ -0.95
GARNL3-201ENST00000373386 RPSAP08865 295 aaKnown RBP9.13□□□□□ -0.95
GARNL3-201ENST00000373386 FGRP09769 529 aa9.13□□□□□ -0.95
GARNL3-201ENST00000373386 PNMA6AP0CW24 399 aaPredicted RBP9.13□□□□□ -0.95
GARNL3-201ENST00000373386 LMOD1P29536 600 aaPredicted RBP9.13□□□□□ -0.95
GARNL3-201ENST00000373386 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.13□□□□□ -0.95
GARNL3-201ENST00000373386 CCDC152Q4G0S7 254 aa9.13□□□□□ -0.95
GARNL3-201ENST00000373386 COBLL1Q53SF7 1204 aa9.13□□□□□ -0.95
GARNL3-201ENST00000373386 AGAP9Q5VTM2 703 aa9.13□□□□□ -0.95
GARNL3-201ENST00000373386 OTUD7BQ6GQQ9 843 aa9.13□□□□□ -0.95
GARNL3-201ENST00000373386 KANK3Q6NY19 840 aa9.13□□□□□ -0.95
GARNL3-201ENST00000373386 HOOK3Q86VS8 718 aa9.13□□□□□ -0.95
GARNL3-201ENST00000373386 DTNBP1Q96EV8 351 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms