RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 USP17L17D6RBQ6 530 aa15.89■□□□□ 0.13
SIRPA-202ENST00000358771 USP17L19D6RCP7 530 aa15.89■□□□□ 0.13
SIRPA-202ENST00000358771 USP17L20D6RJB6 530 aa15.89■□□□□ 0.13
SIRPA-202ENST00000358771 RASA1P20936 1047 aa15.89■□□□□ 0.13
SIRPA-202ENST00000358771 USP17L24Q0WX57 530 aa15.89■□□□□ 0.13
SIRPA-202ENST00000358771 GRM4Q14833 912 aa15.89■□□□□ 0.13
SIRPA-202ENST00000358771 TTBK2Q6IQ55 1244 aa15.89■□□□□ 0.13
SIRPA-202ENST00000358771 GALNT17Q6IS24 598 aa15.89■□□□□ 0.13
SIRPA-202ENST00000358771 USP17L6PQ6QN14 398 aa15.89■□□□□ 0.13
SIRPA-202ENST00000358771 RRAGAQ7L523 313 aa15.89■□□□□ 0.13
SIRPA-202ENST00000358771 NAPGQ99747 312 aaPredicted RBP15.89■□□□□ 0.13
SIRPA-202ENST00000358771 KIAA1024Q9UPX6 916 aa15.89■□□□□ 0.13
SIRPA-202ENST00000358771 ACTN4O43707 911 aaKnown RBP15.88■□□□□ 0.13
SIRPA-202ENST00000358771 NCAPHQ15003 741 aa15.88■□□□□ 0.13
SIRPA-202ENST00000358771 SLC10A5Q5PT55 438 aa15.88■□□□□ 0.13
SIRPA-202ENST00000358771 GJA10Q969M2 543 aa15.88■□□□□ 0.13
SIRPA-202ENST00000358771 CNOT6LQ96LI5 555 aaKnown RBP15.88■□□□□ 0.13
SIRPA-202ENST00000358771 ALS2CR12Q96Q35 445 aa15.88■□□□□ 0.13
SIRPA-202ENST00000358771 BARHL2Q9NY43 387 aa15.88■□□□□ 0.13
SIRPA-202ENST00000358771 FLT1P17948 1338 aa15.88■□□□□ 0.13
SIRPA-202ENST00000358771 POTEDQ86YR6 584 aa15.88■□□□□ 0.13
SIRPA-202ENST00000358771 CEP112Q8N8E3 955 aa15.88■□□□□ 0.13
SIRPA-202ENST00000358771 OGFRQ9NZT2 677 aa15.88■□□□□ 0.13
SIRPA-202ENST00000358771 RAD17O75943 681 aa15.87■□□□□ 0.13
SIRPA-202ENST00000358771 TDP2O95551 362 aa15.87■□□□□ 0.13
SIRPA-202ENST00000358771 ARL6IP4Q66PJ3 421 aaKnown RBP15.87■□□□□ 0.13
SIRPA-202ENST00000358771 UBE2Q2Q8WVN8 375 aa15.87■□□□□ 0.13
SIRPA-202ENST00000358771 PLEKHA4Q9H4M7 779 aa15.87■□□□□ 0.13
SIRPA-202ENST00000358771 DAGLAQ9Y4D2 1042 aa15.87■□□□□ 0.13
SIRPA-202ENST00000358771 MEIS1O00470 390 aa15.87■□□□□ 0.13
SIRPA-202ENST00000358771 HMGB2P26583 209 aaKnown RBP15.87■□□□□ 0.13
SIRPA-202ENST00000358771 SLC35F6Q8N357 371 aa15.87■□□□□ 0.13
SIRPA-202ENST00000358771 LARP4BQ92615 738 aaKnown RBP15.87■□□□□ 0.13
SIRPA-202ENST00000358771 JAKMIP2Q96AA8 810 aa15.87■□□□□ 0.13
SIRPA-202ENST00000358771 SBK1Q52WX2 424 aa15.87■□□□□ 0.13
SIRPA-202ENST00000358771 GPBP1Q86WP2 473 aa15.87■□□□□ 0.13
SIRPA-202ENST00000358771 CSRNP1Q96S65 589 aa15.87■□□□□ 0.13
SIRPA-202ENST00000358771 COA1Q9GZY4 146 aa15.87■□□□□ 0.13
SIRPA-202ENST00000358771 PCDHA6Q9UN73 950 aa15.87■□□□□ 0.13
SIRPA-202ENST00000358771 PCDHA8Q9Y5H6 950 aa15.87■□□□□ 0.13
SIRPA-202ENST00000358771 EPN1Q9Y6I3 576 aaPredicted RBP15.87■□□□□ 0.13
SIRPA-202ENST00000358771 USP17L10C9JJH3 530 aa15.86■□□□□ 0.13
SIRPA-202ENST00000358771 PTPROQ16827 1216 aa15.86■□□□□ 0.13
SIRPA-202ENST00000358771 TAF3Q5VWG9 929 aa15.86■□□□□ 0.13
SIRPA-202ENST00000358771 NEDD1Q8NHV4 660 aa15.86■□□□□ 0.13
SIRPA-202ENST00000358771 TDRD3Q9H7E2 651 aaKnown RBP15.86■□□□□ 0.13
SIRPA-202ENST00000358771 TACC1O75410 805 aa15.86■□□□□ 0.13
SIRPA-202ENST00000358771 FAM13AO94988 1023 aa15.86■□□□□ 0.13
SIRPA-202ENST00000358771 HSPA1LP34931 641 aa15.86■□□□□ 0.13
SIRPA-202ENST00000358771 CYP27A1Q02318 531 aa15.86■□□□□ 0.13
SIRPA-202ENST00000358771 TNIP1Q15025 636 aa15.86■□□□□ 0.13
SIRPA-202ENST00000358771 ASPRV1Q53RT3 343 aa15.86■□□□□ 0.13
SIRPA-202ENST00000358771 PABPC4Q13310 644 aaKnown RBP eCLIP15.86■□□□□ 0.13
SIRPA-202ENST00000358771 PRPF4BQ13523 1007 aaKnown RBP15.86■□□□□ 0.13
SIRPA-202ENST00000358771 TRIM14Q14142 442 aa15.86■□□□□ 0.13
SIRPA-202ENST00000358771 ABCB5Q2M3G0 1257 aa15.86■□□□□ 0.13
SIRPA-202ENST00000358771 IQCEQ6IPM2 695 aa15.86■□□□□ 0.13
SIRPA-202ENST00000358771 FBXO38Q6PIJ6 1188 aa15.86■□□□□ 0.13
SIRPA-202ENST00000358771 GBP3Q9H0R5 595 aa15.86■□□□□ 0.13
SIRPA-202ENST00000358771 POLLQ9UGP5 575 aa15.86■□□□□ 0.13
SIRPA-202ENST00000358771 SEC31AO94979 1220 aaKnown RBP15.85■□□□□ 0.13
SIRPA-202ENST00000358771 HOXA13P31271 388 aaPredicted RBP15.85■□□□□ 0.13
SIRPA-202ENST00000358771 DNM2P50570 870 aa15.85■□□□□ 0.13
SIRPA-202ENST00000358771 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.85■□□□□ 0.13
SIRPA-202ENST00000358771 RWDD2AQ9UIY3 292 aa15.85■□□□□ 0.13
SIRPA-202ENST00000358771 DLGAP5Q15398 846 aa15.85■□□□□ 0.13
SIRPA-202ENST00000358771 TCP11X2Q5H9J9 407 aa15.85■□□□□ 0.13
SIRPA-202ENST00000358771 TPH2Q8IWU9 490 aa15.85■□□□□ 0.13
SIRPA-202ENST00000358771 EHBP1Q8NDI1 1231 aa15.85■□□□□ 0.13
SIRPA-202ENST00000358771 P2RX5Q93086 422 aa15.85■□□□□ 0.13
SIRPA-202ENST00000358771 FAM205AQ6ZU69 1335 aa15.85■□□□□ 0.13
SIRPA-202ENST00000358771 FCER1AP12319 257 aa15.85■□□□□ 0.13
SIRPA-202ENST00000358771 GYS1P13807 737 aa15.85■□□□□ 0.13
SIRPA-202ENST00000358771 CD44P16070 742 aaKnown RBP15.85■□□□□ 0.13
SIRPA-202ENST00000358771 LMAN1P49257 510 aa15.85■□□□□ 0.13
SIRPA-202ENST00000358771 TXLNBQ8N3L3 684 aa15.85■□□□□ 0.13
SIRPA-202ENST00000358771 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.85■□□□□ 0.13
SIRPA-202ENST00000358771 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.85■□□□□ 0.13
SIRPA-202ENST00000358771 A0A087X0B3 334 aa15.85■□□□□ 0.13
SIRPA-202ENST00000358771 WNT7AO00755 349 aa15.85■□□□□ 0.13
SIRPA-202ENST00000358771 SLURP2P0DP57 97 aa15.85■□□□□ 0.13
SIRPA-202ENST00000358771 SEPT2Q15019 361 aa15.85■□□□□ 0.13
SIRPA-202ENST00000358771 MIGA2Q7L4E1 593 aa15.85■□□□□ 0.13
SIRPA-202ENST00000358771 RDH13Q8NBN7 331 aa15.85■□□□□ 0.13
SIRPA-202ENST00000358771 NAA15Q9BXJ9 866 aaKnown RBP15.85■□□□□ 0.13
SIRPA-202ENST00000358771 IL17RBQ9NRM6 502 aa15.85■□□□□ 0.13
SIRPA-202ENST00000358771 DNM3Q9UQ16 869 aa15.85■□□□□ 0.13
SIRPA-202ENST00000358771 CRKP46108 304 aa15.84■□□□□ 0.13
SIRPA-202ENST00000358771 MYOCDQ8IZQ8 938 aa15.84■□□□□ 0.13
SIRPA-202ENST00000358771 PCDHB13Q9Y5F0 798 aa15.84■□□□□ 0.13
SIRPA-202ENST00000358771 FAM26FQ5R3K3 315 aa15.84■□□□□ 0.13
SIRPA-202ENST00000358771 GPATCH4Q5T3I0 446 aaKnown RBP15.84■□□□□ 0.13
SIRPA-202ENST00000358771 VPS36Q86VN1 386 aa15.84■□□□□ 0.13
SIRPA-202ENST00000358771 FBXO11Q86XK2 927 aa15.84■□□□□ 0.13
SIRPA-202ENST00000358771 SMCR8Q8TEV9 937 aaPredicted RBP15.84■□□□□ 0.13
SIRPA-202ENST00000358771 WDR24Q96S15 920 aa15.84■□□□□ 0.13
SIRPA-202ENST00000358771 ADRA2BP18089 450 aa15.84■□□□□ 0.13
SIRPA-202ENST00000358771 MAGEA1P43355 309 aa15.84■□□□□ 0.13
SIRPA-202ENST00000358771 TMEM132AQ24JP5 1023 aa15.84■□□□□ 0.13
SIRPA-202ENST00000358771 HAUS3Q68CZ6 603 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms