RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 ERCC5P28715 1186 aaPredicted RBP7.85□□□□□ -1.15
TRIM55-203ENST00000350034 SLC16A2P36021 539 aa7.85□□□□□ -1.15
TRIM55-203ENST00000350034 SLC1A4P43007 532 aa7.85□□□□□ -1.15
TRIM55-203ENST00000350034 MYL5Q02045 173 aa7.85□□□□□ -1.15
TRIM55-203ENST00000350034 KLRC3Q07444 240 aa7.85□□□□□ -1.15
TRIM55-203ENST00000350034 CCDC96Q2M329 555 aa7.85□□□□□ -1.15
TRIM55-203ENST00000350034 CIAPIN1Q6FI81 312 aa7.85□□□□□ -1.15
TRIM55-203ENST00000350034 DTHD1Q6ZMT9 781 aa7.85□□□□□ -1.15
TRIM55-203ENST00000350034 KCTD1Q719H9 257 aa7.85□□□□□ -1.15
TRIM55-203ENST00000350034 GRAMD1CQ8IYS0 662 aa7.85□□□□□ -1.15
TRIM55-203ENST00000350034 ENOX1Q8TC92 643 aaKnown RBP7.85□□□□□ -1.15
TRIM55-203ENST00000350034 TBCKQ8TEA7 893 aa7.85□□□□□ -1.15
TRIM55-203ENST00000350034 AK8Q96MA6 479 aa7.85□□□□□ -1.15
TRIM55-203ENST00000350034 GSDMAQ96QA5 445 aa7.85□□□□□ -1.15
TRIM55-203ENST00000350034 MTMR9Q96QG7 549 aa7.85□□□□□ -1.15
TRIM55-203ENST00000350034 MED15Q96RN5 788 aa7.85□□□□□ -1.15
TRIM55-203ENST00000350034 CSRNP1Q96S65 589 aa7.85□□□□□ -1.15
TRIM55-203ENST00000350034 MTRQ99707 1265 aa7.85□□□□□ -1.15
TRIM55-203ENST00000350034 TRIM34Q9BYJ4 488 aa7.85□□□□□ -1.15
TRIM55-203ENST00000350034 GLT8D2Q9H1C3 349 aa7.85□□□□□ -1.15
TRIM55-203ENST00000350034 KCNF1Q9H3M0 494 aa7.85□□□□□ -1.15
TRIM55-203ENST00000350034 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.85□□□□□ -1.15
TRIM55-203ENST00000350034 TMEM260Q9NX78 707 aa7.85□□□□□ -1.15
TRIM55-203ENST00000350034 BIN2Q9UBW5 565 aaPredicted RBP7.85□□□□□ -1.15
TRIM55-203ENST00000350034 BAZ2BQ9UIF8 2168 aaKnown RBP7.84□□□□□ -1.15
TRIM55-203ENST00000350034 A0A1W2PRG0 241 aa7.84□□□□□ -1.15
TRIM55-203ENST00000350034 WNT10BO00744 389 aa7.84□□□□□ -1.15
TRIM55-203ENST00000350034 GDF11O95390 407 aa7.84□□□□□ -1.15
TRIM55-203ENST00000350034 ZNF18P17022 549 aa7.84□□□□□ -1.15
TRIM55-203ENST00000350034 RPS12P25398 132 aaKnown RBP7.84□□□□□ -1.15
TRIM55-203ENST00000350034 MRPL12P52815 198 aaKnown RBP7.84□□□□□ -1.15
TRIM55-203ENST00000350034 ATP2B2Q01814 1243 aa7.84□□□□□ -1.15
TRIM55-203ENST00000350034 SEMA3FQ13275 785 aa7.84□□□□□ -1.15
TRIM55-203ENST00000350034 TNIP1Q15025 636 aa7.84□□□□□ -1.15
TRIM55-203ENST00000350034 QRICH1Q2TAL8 776 aa7.84□□□□□ -1.15
TRIM55-203ENST00000350034 NAALADL2Q58DX5 795 aa7.84□□□□□ -1.15
TRIM55-203ENST00000350034 JAKMIP3Q5VZ66 844 aa7.84□□□□□ -1.15
TRIM55-203ENST00000350034 ISM2Q6H9L7 571 aa7.84□□□□□ -1.15
TRIM55-203ENST00000350034 PPP4R3AQ6IN85 833 aa7.84□□□□□ -1.15
TRIM55-203ENST00000350034 TEX2Q8IWB9 1127 aa7.84□□□□□ -1.15
TRIM55-203ENST00000350034 MBOAT7Q96N66 472 aa7.84□□□□□ -1.15
TRIM55-203ENST00000350034 TTC12Q9H892 705 aaPredicted RBP7.84□□□□□ -1.15
TRIM55-203ENST00000350034 DACH1Q9UI36 760 aa7.84□□□□□ -1.15
TRIM55-203ENST00000350034 TMX2Q9Y320 296 aa7.84□□□□□ -1.15
TRIM55-203ENST00000350034 NEMFO60524 1076 aa7.83□□□□□ -1.16
TRIM55-203ENST00000350034 PLA2G6O60733 806 aa7.83□□□□□ -1.16
TRIM55-203ENST00000350034 MYL1P05976 194 aa7.83□□□□□ -1.16
TRIM55-203ENST00000350034 BMP3P12645 472 aa7.83□□□□□ -1.16
TRIM55-203ENST00000350034 GCFC2P16383 781 aaKnown RBP7.83□□□□□ -1.16
TRIM55-203ENST00000350034 PTGS1P23219 599 aa7.83□□□□□ -1.16
TRIM55-203ENST00000350034 TXLNAP40222 546 aa7.83□□□□□ -1.16
TRIM55-203ENST00000350034 AFMP43652 599 aa7.83□□□□□ -1.16
TRIM55-203ENST00000350034 FXR2P51116 673 aaKnown RBP eCLIP7.83□□□□□ -1.16
TRIM55-203ENST00000350034 TPM4P67936 248 aa7.83□□□□□ -1.16
TRIM55-203ENST00000350034 FMR1Q06787 632 aaKnown RBP eCLIP7.83□□□□□ -1.16
TRIM55-203ENST00000350034 CUL4BQ13620 913 aa7.83□□□□□ -1.16
TRIM55-203ENST00000350034 CDC37Q16543 378 aaPredicted RBP7.83□□□□□ -1.16
TRIM55-203ENST00000350034 LETM2Q2VYF4 491 aa7.83□□□□□ -1.16
TRIM55-203ENST00000350034 CCDC144BQ3MJ40 725 aa7.83□□□□□ -1.16
TRIM55-203ENST00000350034 SYDE2Q5VT97 1194 aa7.83□□□□□ -1.16
TRIM55-203ENST00000350034 MCTP2Q6DN12 878 aa7.83□□□□□ -1.16
TRIM55-203ENST00000350034 CCDC186Q7Z3E2 898 aa7.83□□□□□ -1.16
TRIM55-203ENST00000350034 IGSF22Q8N9C0 903 aa7.83□□□□□ -1.16
TRIM55-203ENST00000350034 SPC24Q8NBT2 197 aa7.83□□□□□ -1.16
TRIM55-203ENST00000350034 KIAA1524Q8TCG1 905 aa7.83□□□□□ -1.16
TRIM55-203ENST00000350034 ZNF526Q8TF50 670 aaPredicted RBP7.83□□□□□ -1.16
TRIM55-203ENST00000350034 CRYGNQ8WXF5 182 aa7.83□□□□□ -1.16
TRIM55-203ENST00000350034 JDP2Q8WYK2 163 aa7.83□□□□□ -1.16
TRIM55-203ENST00000350034 DPF2Q92785 391 aa7.83□□□□□ -1.16
TRIM55-203ENST00000350034 CUL5Q93034 780 aa7.83□□□□□ -1.16
TRIM55-203ENST00000350034 ABHD8Q96I13 439 aa7.83□□□□□ -1.16
TRIM55-203ENST00000350034 ZNF830Q96NB3 372 aaPredicted RBP7.83□□□□□ -1.16
TRIM55-203ENST00000350034 MMTAG2Q9BU76 263 aaKnown RBP7.83□□□□□ -1.16
TRIM55-203ENST00000350034 CUEDC2Q9H467 287 aa7.83□□□□□ -1.16
TRIM55-203ENST00000350034 PSTPIP2Q9H939 334 aa7.83□□□□□ -1.16
TRIM55-203ENST00000350034 MAGEF1Q9HAY2 307 aa7.83□□□□□ -1.16
TRIM55-203ENST00000350034 DISC1Q9NRI5 854 aa7.83□□□□□ -1.16
TRIM55-203ENST00000350034 SPTLC3Q9NUV7 552 aa7.83□□□□□ -1.16
TRIM55-203ENST00000350034 KBTBD4Q9NVX7 518 aa7.83□□□□□ -1.16
TRIM55-203ENST00000350034 IMPACTQ9P2X3 320 aa7.83□□□□□ -1.16
TRIM55-203ENST00000350034 NRBP1Q9UHY1 535 aa7.83□□□□□ -1.16
TRIM55-203ENST00000350034 ZBTB21Q9ULJ3 1066 aa7.83□□□□□ -1.16
TRIM55-203ENST00000350034 FER1L6Q2WGJ9 1857 aa7.83□□□□□ -1.16
TRIM55-203ENST00000350034 CYP3A7-CYP3A51PA0A087WV96 503 aa7.82□□□□□ -1.16
TRIM55-203ENST00000350034 SHTN1A0MZ66 631 aa7.82□□□□□ -1.16
TRIM55-203ENST00000350034 PP2D1A8MPX8 630 aa7.82□□□□□ -1.16
TRIM55-203ENST00000350034 PHF20L1A8MW92 1017 aa7.82□□□□□ -1.16
TRIM55-203ENST00000350034 PPP1R3GB7ZBB8 358 aa7.82□□□□□ -1.16
TRIM55-203ENST00000350034 FZD9O00144 591 aa7.82□□□□□ -1.16
TRIM55-203ENST00000350034 SLC37A4O43826 429 aa7.82□□□□□ -1.16
TRIM55-203ENST00000350034 CCNT1O60563 726 aaKnown RBP7.82□□□□□ -1.16
TRIM55-203ENST00000350034 OFD1O75665 1012 aa7.82□□□□□ -1.16
TRIM55-203ENST00000350034 TDP2O95551 362 aa7.82□□□□□ -1.16
TRIM55-203ENST00000350034 CD44P16070 742 aaKnown RBP7.82□□□□□ -1.16
TRIM55-203ENST00000350034 CYP3A7P24462 503 aa7.82□□□□□ -1.16
TRIM55-203ENST00000350034 CDC25AP30304 524 aa7.82□□□□□ -1.16
TRIM55-203ENST00000350034 BRCA1P38398 1863 aaKnown RBP7.82□□□□□ -1.16
TRIM55-203ENST00000350034 CAP2P40123 477 aa7.82□□□□□ -1.16
TRIM55-203ENST00000350034 STAT6P42226 847 aa7.82□□□□□ -1.16
TRIM55-203ENST00000350034 HTRA3P83110 453 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms