RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 ZNF658Q5TYW1 1059 aaPredicted RBP12.03□□□□□ -0.48
RPL28-201ENST00000344063 HOOK3Q86VS8 718 aa12.03□□□□□ -0.48
RPL28-201ENST00000344063 CACNA2D3Q8IZS8 1091 aa12.03□□□□□ -0.48
RPL28-201ENST00000344063 TGFBRAP1Q8WUH2 860 aa12.03□□□□□ -0.48
RPL28-201ENST00000344063 ADAMTS13Q76LX8 1427 aa12.03□□□□□ -0.48
RPL28-201ENST00000344063 CHGBP05060 677 aa12.03□□□□□ -0.48
RPL28-201ENST00000344063 PDE6BP35913 854 aa12.03□□□□□ -0.48
RPL28-201ENST00000344063 RCAN1P53805 252 aa12.03□□□□□ -0.48
RPL28-201ENST00000344063 FOXO4P98177 505 aa12.03□□□□□ -0.48
RPL28-201ENST00000344063 ALX1Q15699 326 aa12.03□□□□□ -0.48
RPL28-201ENST00000344063 TRIM68Q6AZZ1 485 aa12.03□□□□□ -0.48
RPL28-201ENST00000344063 DHTKD1Q96HY7 919 aaPredicted RBP12.03□□□□□ -0.48
RPL28-201ENST00000344063 CCDC77Q9BR77 488 aa12.03□□□□□ -0.48
RPL28-201ENST00000344063 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.03□□□□□ -0.482e-7■■■■■ 33.6
RPL28-201ENST00000344063 RWDD2AQ9UIY3 292 aa12.03□□□□□ -0.48
RPL28-201ENST00000344063 FHOD1Q9Y613 1164 aa12.03□□□□□ -0.48
RPL28-201ENST00000344063 CALUO43852 315 aaPredicted RBP12.03□□□□□ -0.48
RPL28-201ENST00000344063 GGCXP38435 758 aa12.03□□□□□ -0.48
RPL28-201ENST00000344063 ACTN3Q08043 901 aaPredicted RBP12.03□□□□□ -0.48
RPL28-201ENST00000344063 RASGRF1Q13972 1273 aa12.03□□□□□ -0.48
RPL28-201ENST00000344063 RUFY4Q6ZNE9 571 aa12.03□□□□□ -0.48
RPL28-201ENST00000344063 EYA3Q99504 573 aa12.03□□□□□ -0.48
RPL28-201ENST00000344063 TUBGCP2Q9BSJ2 902 aa12.03□□□□□ -0.48
RPL28-201ENST00000344063 GGA1Q9UJY5 639 aa12.03□□□□□ -0.48
RPL28-201ENST00000344063 KLRF2D3W0D1 207 aa12.02□□□□□ -0.48
RPL28-201ENST00000344063 FLOT1O75955 427 aa12.02□□□□□ -0.48
RPL28-201ENST00000344063 DAAM2Q86T65 1068 aa12.02□□□□□ -0.48
RPL28-201ENST00000344063 STAG1Q8WVM7 1258 aa12.02□□□□□ -0.48
RPL28-201ENST00000344063 TCP11Q8WWU5 503 aa12.02□□□□□ -0.48
RPL28-201ENST00000344063 CNKSR2Q8WXI2 1034 aa12.02□□□□□ -0.48
RPL28-201ENST00000344063 FUCA2Q9BTY2 467 aa12.02□□□□□ -0.48
RPL28-201ENST00000344063 MRFAP1Q9Y605 127 aa12.02□□□□□ -0.48
RPL28-201ENST00000344063 FBXW10Q5XX13 1052 aa12.02□□□□□ -0.49
RPL28-201ENST00000344063 ATG9AQ7Z3C6 839 aa12.02□□□□□ -0.49
RPL28-201ENST00000344063 GPKOWQ92917 476 aaPredicted RBP eCLIP12.02□□□□□ -0.49
RPL28-201ENST00000344063 AK8Q96MA6 479 aa12.02□□□□□ -0.49
RPL28-201ENST00000344063 ISCA1Q9BUE6 129 aa12.02□□□□□ -0.49
RPL28-201ENST00000344063 HDAC6Q9UBN7 1215 aa12.02□□□□□ -0.49
RPL28-201ENST00000344063 FOXN1O15353 648 aa12.02□□□□□ -0.49
RPL28-201ENST00000344063 ECM2O94769 699 aaPredicted RBP12.02□□□□□ -0.49
RPL28-201ENST00000344063 CDC25AP30304 524 aa12.02□□□□□ -0.49
RPL28-201ENST00000344063 RPS6KA1Q15418 735 aa12.02□□□□□ -0.49
RPL28-201ENST00000344063 SNCBQ16143 134 aa12.02□□□□□ -0.49
RPL28-201ENST00000344063 TRAPPC3LQ5T215 181 aa12.02□□□□□ -0.49
RPL28-201ENST00000344063 MYOCDQ8IZQ8 938 aa12.02□□□□□ -0.49
RPL28-201ENST00000344063 TBC1D22AQ8WUA7 517 aa12.02□□□□□ -0.49
RPL28-201ENST00000344063 PAGE5Q96GU1 130 aa12.02□□□□□ -0.49
RPL28-201ENST00000344063 RBM17Q96I25 401 aaKnown RBP12.02□□□□□ -0.49
RPL28-201ENST00000344063 MTUS1Q9ULD2 1270 aa12.02□□□□□ -0.49
RPL28-201ENST00000344063 TEX33O43247 280 aa12.02□□□□□ -0.49
RPL28-201ENST00000344063 TRIM28Q13263 835 aaKnown RBP12.02□□□□□ -0.49
RPL28-201ENST00000344063 CYB5R4Q7L1T6 521 aa12.02□□□□□ -0.49
RPL28-201ENST00000344063 MRRFQ96E11 262 aaKnown RBP12.02□□□□□ -0.49
RPL28-201ENST00000344063 FRMD4BQ9Y2L6 1034 aa12.02□□□□□ -0.49
RPL28-201ENST00000344063 ITSN1Q15811 1721 aa12.02□□□□□ -0.49
RPL28-201ENST00000344063 CDHR2Q9BYE9 1310 aa12.01□□□□□ -0.49
RPL28-201ENST00000344063 KDM3AQ9Y4C1 1321 aa12.01□□□□□ -0.49
RPL28-201ENST00000344063 CTNNA2P26232 953 aa12.01□□□□□ -0.49
RPL28-201ENST00000344063 GJC1P36383 396 aa12.01□□□□□ -0.49
RPL28-201ENST00000344063 SGMS1Q86VZ5 419 aa12.01□□□□□ -0.49
RPL28-201ENST00000344063 DPH5Q9H2P9 285 aa12.01□□□□□ -0.49
RPL28-201ENST00000344063 PCDHA4Q9UN74 947 aa12.01□□□□□ -0.49
RPL28-201ENST00000344063 TMEM131LA2VDJ0 1609 aa12.01□□□□□ -0.49
RPL28-201ENST00000344063 MROH1Q8NDA8 1641 aa12.01□□□□□ -0.49
RPL28-201ENST00000344063 TECP42680 631 aa12.01□□□□□ -0.49
RPL28-201ENST00000344063 ADAT2Q7Z6V5 191 aaKnown RBP12.01□□□□□ -0.49
RPL28-201ENST00000344063 ZNF622Q969S3 477 aaKnown RBP eCLIP12.01□□□□□ -0.49
RPL28-201ENST00000344063 TBC1D7Q9P0N9 293 aa12.01□□□□□ -0.49
RPL28-201ENST00000344063 SHPRHQ149N8 1683 aa12.01□□□□□ -0.49
RPL28-201ENST00000344063 CCDC160A6NGH7 325 aa12.01□□□□□ -0.49
RPL28-201ENST00000344063 MFAP3LO75121 409 aa12.01□□□□□ -0.49
RPL28-201ENST00000344063 NT5C2P49902 561 aa12.01□□□□□ -0.49
RPL28-201ENST00000344063 ZBTB16Q05516 673 aa12.01□□□□□ -0.49
RPL28-201ENST00000344063 NNTQ13423 1086 aa12.01□□□□□ -0.49
RPL28-201ENST00000344063 ARL6IP4Q66PJ3 421 aaKnown RBP12.01□□□□□ -0.49
RPL28-201ENST00000344063 EPSTI1Q96J88 318 aa12.01□□□□□ -0.49
RPL28-201ENST00000344063 CNOT6LQ96LI5 555 aaKnown RBP12.01□□□□□ -0.49
RPL28-201ENST00000344063 EPB41L5Q9HCM4 733 aa12.01□□□□□ -0.49
RPL28-201ENST00000344063 SEC31BQ9NQW1 1179 aa12.01□□□□□ -0.49
RPL28-201ENST00000344063 SOS2Q07890 1332 aaPredicted RBP12.01□□□□□ -0.49
RPL28-201ENST00000344063 B4DLN1 442 aa12.01□□□□□ -0.49
RPL28-201ENST00000344063 FAM212AQ96EL1 285 aa12.01□□□□□ -0.49
RPL28-201ENST00000344063 DNM3Q9UQ16 869 aa12.01□□□□□ -0.49
RPL28-201ENST00000344063 CEP83Q9Y592 693 aa12.01□□□□□ -0.49
RPL28-201ENST00000344063 KCNK3O14649 394 aa12□□□□□ -0.49
RPL28-201ENST00000344063 EIF6P56537 245 aaKnown RBP12□□□□□ -0.49
RPL28-201ENST00000344063 NEDD9Q14511 834 aa12□□□□□ -0.49
RPL28-201ENST00000344063 CCDC50Q8IVM0 306 aa12□□□□□ -0.49
RPL28-201ENST00000344063 KRT12Q99456 494 aa12□□□□□ -0.49
RPL28-201ENST00000344063 LY9Q9HBG7 655 aa12□□□□□ -0.49
RPL28-201ENST00000344063 BIN2Q9UBW5 565 aaPredicted RBP12□□□□□ -0.49
RPL28-201ENST00000344063 LOC102724428A0A0B4J2F2 783 aa12□□□□□ -0.49
RPL28-201ENST00000344063 ACTN4O43707 911 aaKnown RBP12□□□□□ -0.49
RPL28-201ENST00000344063 TNFAIP3P21580 790 aa12□□□□□ -0.49
RPL28-201ENST00000344063 IFNAR2P48551 515 aa12□□□□□ -0.49
RPL28-201ENST00000344063 SIK1P57059 783 aa12□□□□□ -0.49
RPL28-201ENST00000344063 ATP11AP98196 1134 aa12□□□□□ -0.49
RPL28-201ENST00000344063 CALCOCO2Q13137 446 aa12□□□□□ -0.49
RPL28-201ENST00000344063 NELFCDQ8IXH7 590 aa12□□□□□ -0.49
RPL28-201ENST00000344063 SYCE1Q8N0S2 351 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms