RNA–Protein interactions for RNA: ENST00000334731.6

C9orf85-201, Transcript of chromosome 9 open reading frame 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf85, Length 1,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-201ENST00000334731 SNHG28P0DPA3 235 aa13.19□□□□□ -0.3
C9orf85-201ENST00000334731 PDHBP11177 359 aa13.19□□□□□ -0.3
C9orf85-201ENST00000334731 NT5C2P49902 561 aa13.19□□□□□ -0.3
C9orf85-201ENST00000334731 RTP1P59025 263 aa13.19□□□□□ -0.3
C9orf85-201ENST00000334731 ACVR2BQ13705 512 aa13.19□□□□□ -0.3
C9orf85-201ENST00000334731 IMMTQ16891 758 aaKnown RBP13.19□□□□□ -0.3
C9orf85-201ENST00000334731 MUM1L1Q5H9M0 696 aa13.19□□□□□ -0.3
C9orf85-201ENST00000334731 SYDE2Q5VT97 1194 aa13.19□□□□□ -0.3
C9orf85-201ENST00000334731 DGKHQ86XP1 1220 aa13.19□□□□□ -0.3
C9orf85-201ENST00000334731 ANKS1AQ92625 1134 aa13.19□□□□□ -0.3
C9orf85-201ENST00000334731 FERMT2Q96AC1 680 aa13.19□□□□□ -0.3
C9orf85-201ENST00000334731 LENG1Q96BZ8 264 aaPredicted RBP13.19□□□□□ -0.3
C9orf85-201ENST00000334731 ZKSCAN3Q9BRR0 538 aa13.19□□□□□ -0.3
C9orf85-201ENST00000334731 CTNNA3Q9UI47 895 aa13.19□□□□□ -0.3
C9orf85-201ENST00000334731 FAM184BQ9ULE4 1060 aa13.19□□□□□ -0.3
C9orf85-201ENST00000334731 PHF24Q9UPV7 400 aa13.19□□□□□ -0.3
C9orf85-201ENST00000334731 MYH4Q9Y623 1939 aa13.19□□□□□ -0.3
C9orf85-201ENST00000334731 ALPK3Q96L96 1907 aa13.18□□□□□ -0.3
C9orf85-201ENST00000334731 ZNF543Q08ER8 600 aa13.18□□□□□ -0.3
C9orf85-201ENST00000334731 SNX17Q15036 470 aa13.18□□□□□ -0.3
C9orf85-201ENST00000334731 ARMCX2Q7L311 632 aa13.18□□□□□ -0.3
C9orf85-201ENST00000334731 RNF180Q86T96 592 aa13.18□□□□□ -0.3
C9orf85-201ENST00000334731 CCDC144CPQ8IYA2 1237 aa13.18□□□□□ -0.3
C9orf85-201ENST00000334731 KATNBL1Q9H079 304 aa13.18□□□□□ -0.3
C9orf85-201ENST00000334731 ABHD16BQ9H3Z7 469 aa13.18□□□□□ -0.3
C9orf85-201ENST00000334731 ZSWIM5Q9P217 1185 aa13.18□□□□□ -0.3
C9orf85-201ENST00000334731 ZHX1Q9UKY1 873 aaPredicted RBP13.18□□□□□ -0.3
C9orf85-201ENST00000334731 CCPG1Q9ULG6 757 aa13.18□□□□□ -0.3
C9orf85-201ENST00000334731 B4E1Z4 1266 aa13.17□□□□□ -0.3
C9orf85-201ENST00000334731 ADAMTS4O75173 837 aa13.17□□□□□ -0.3
C9orf85-201ENST00000334731 DUSP11O75319 330 aaKnown RBP13.17□□□□□ -0.3
C9orf85-201ENST00000334731 CHMLP26374 656 aa13.17□□□□□ -0.3
C9orf85-201ENST00000334731 CCDC144BQ3MJ40 725 aa13.17□□□□□ -0.3
C9orf85-201ENST00000334731 CCDC178Q5BJE1 867 aa13.17□□□□□ -0.3
C9orf85-201ENST00000334731 C1orf53Q5VUE5 145 aa13.17□□□□□ -0.3
C9orf85-201ENST00000334731 MAMSTRQ6ZN01 415 aa13.17□□□□□ -0.3
C9orf85-201ENST00000334731 IQCA1Q86XH1 822 aa13.17□□□□□ -0.3
C9orf85-201ENST00000334731 KLHDC9Q8NEP7 349 aa13.17□□□□□ -0.3
C9orf85-201ENST00000334731 ZSCAN10Q96SZ4 725 aaPredicted RBP13.17□□□□□ -0.3
C9orf85-201ENST00000334731 CYP39A1Q9NYL5 469 aa13.17□□□□□ -0.3
C9orf85-201ENST00000334731 ATP11BQ9Y2G3 1177 aa13.17□□□□□ -0.3
C9orf85-201ENST00000334731 ASTN1O14525 1302 aa13.16□□□□□ -0.3
C9orf85-201ENST00000334731 SYNRGQ9UMZ2 1314 aa13.16□□□□□ -0.3
C9orf85-201ENST00000334731 ASB14A6NK59 587 aa13.16□□□□□ -0.3
C9orf85-201ENST00000334731 ADCY6O43306 1168 aa13.16□□□□□ -0.3
C9orf85-201ENST00000334731 MDM2Q00987 491 aaPredicted RBP13.16□□□□□ -0.3
C9orf85-201ENST00000334731 TRIM60Q495X7 471 aa13.16□□□□□ -0.3
C9orf85-201ENST00000334731 CCSAPQ6IQ19 270 aaPredicted RBP13.16□□□□□ -0.3
C9orf85-201ENST00000334731 PURBQ96QR8 312 aaKnown RBP13.16□□□□□ -0.3
C9orf85-201ENST00000334731 TSEN34Q9BSV6 310 aaKnown RBP13.16□□□□□ -0.3
C9orf85-201ENST00000334731 KRT23Q9C075 422 aa13.16□□□□□ -0.3
C9orf85-201ENST00000334731 ZNFX1Q9P2E3 1918 aaKnown RBP13.15□□□□□ -0.3
C9orf85-201ENST00000334731 A0A1W2PQ45 241 aaPredicted RBP13.15□□□□□ -0.3
C9orf85-201ENST00000334731 A0A1W2PQY0 241 aa13.15□□□□□ -0.3
C9orf85-201ENST00000334731 SOX1O00570 391 aaPredicted RBP13.15□□□□□ -0.3
C9orf85-201ENST00000334731 GOLGA8HP0CJ92 632 aa13.15□□□□□ -0.3
C9orf85-201ENST00000334731 IRX5P78411 483 aaPredicted RBP13.15□□□□□ -0.3
C9orf85-201ENST00000334731 PTH1RQ03431 593 aa13.15□□□□□ -0.3
C9orf85-201ENST00000334731 BAATQ14032 418 aaPredicted RBP13.15□□□□□ -0.3
C9orf85-201ENST00000334731 KCNA10Q16322 511 aa13.15□□□□□ -0.3
C9orf85-201ENST00000334731 GPATCH4Q5T3I0 446 aaKnown RBP13.15□□□□□ -0.3
C9orf85-201ENST00000334731 NSMFQ6X4W1 530 aa13.15□□□□□ -0.3
C9orf85-201ENST00000334731 ENAHQ8N8S7 591 aaPredicted RBP13.15□□□□□ -0.3
C9orf85-201ENST00000334731 PNMA1Q8ND90 353 aa13.15□□□□□ -0.3
C9orf85-201ENST00000334731 RUFY2Q8WXA3 655 aa13.15□□□□□ -0.3
C9orf85-201ENST00000334731 CLEC4DQ8WXI8 215 aa13.15□□□□□ -0.3
C9orf85-201ENST00000334731 UBE2OQ9C0C9 1292 aaKnown RBP13.15□□□□□ -0.3
C9orf85-201ENST00000334731 KAT14Q9H8E8 782 aa13.15□□□□□ -0.3
C9orf85-201ENST00000334731 CNNM2Q9H8M5 875 aa13.15□□□□□ -0.3
C9orf85-201ENST00000334731 PNMA2Q9UL42 364 aa13.15□□□□□ -0.3
C9orf85-201ENST00000334731 DDX49Q9Y6V7 483 aaKnown RBP13.15□□□□□ -0.3
C9orf85-201ENST00000334731 RAD50Q92878 1312 aa13.14□□□□□ -0.31
C9orf85-201ENST00000334731 FRMPD3Q5JV73 1810 aa13.14□□□□□ -0.31
C9orf85-201ENST00000334731 MYADML2A6NDP7 307 aa13.14□□□□□ -0.31
C9orf85-201ENST00000334731 NFIBO00712 420 aa13.14□□□□□ -0.31
C9orf85-201ENST00000334731 CST5P28325 142 aaPredicted RBP13.14□□□□□ -0.31
C9orf85-201ENST00000334731 ACLYP53396 1101 aa13.14□□□□□ -0.31
C9orf85-201ENST00000334731 GJA9P57773 515 aa13.14□□□□□ -0.31
C9orf85-201ENST00000334731 TLE2Q04725 743 aa13.14□□□□□ -0.31
C9orf85-201ENST00000334731 TDHQ8IZJ6 230 aa13.14□□□□□ -0.31
C9orf85-201ENST00000334731 MORC4Q8TE76 937 aa13.14□□□□□ -0.31
C9orf85-201ENST00000334731 LBHD1Q9BQE6 289 aaPredicted RBP13.14□□□□□ -0.31
C9orf85-201ENST00000334731 UBA5Q9GZZ9 404 aa13.14□□□□□ -0.31
C9orf85-201ENST00000334731 UPF3AQ9H1J1 476 aaKnown RBP13.14□□□□□ -0.31
C9orf85-201ENST00000334731 CPVLQ9H3G5 476 aa13.14□□□□□ -0.31
C9orf85-201ENST00000334731 PRKAG2Q9UGJ0 569 aa13.14□□□□□ -0.31
C9orf85-201ENST00000334731 TNKSO95271 1327 aa13.13□□□□□ -0.31
C9orf85-201ENST00000334731 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.13□□□□□ -0.31
C9orf85-201ENST00000334731 MOXD2PA6NHM9 499 aa13.13□□□□□ -0.31
C9orf85-201ENST00000334731 CTAGE5O15320 804 aa13.13□□□□□ -0.31
C9orf85-201ENST00000334731 SGSM2O43147 1006 aa13.13□□□□□ -0.31
C9orf85-201ENST00000334731 C6orf222P0C671 652 aaPredicted RBP13.13□□□□□ -0.31
C9orf85-201ENST00000334731 NKX3-2P78367 333 aa13.13□□□□□ -0.31
C9orf85-201ENST00000334731 TNFAIP2Q03169 654 aa13.13□□□□□ -0.31
C9orf85-201ENST00000334731 TAPT1Q6NXT6 567 aa13.13□□□□□ -0.31
C9orf85-201ENST00000334731 CYB5R4Q7L1T6 521 aa13.13□□□□□ -0.31
C9orf85-201ENST00000334731 SH3RF1Q7Z6J0 888 aa13.13□□□□□ -0.31
C9orf85-201ENST00000334731 LRCH3Q96II8 777 aa13.13□□□□□ -0.31
C9orf85-201ENST00000334731 UBAC1Q9BSL1 405 aa13.13□□□□□ -0.31
C9orf85-201ENST00000334731 SPC25Q9HBM1 224 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms