RNA–Protein interactions for RNA: ENST00000320516.4

CCDC65-202, Transcript of coiled-coil domain containing 65, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC65, Length 1,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-202ENST00000320516 CCDC136Q96JN2 1154 aa11.62□□□□□ -0.55
CCDC65-202ENST00000320516 PURBQ96QR8 312 aaKnown RBP11.62□□□□□ -0.55
CCDC65-202ENST00000320516 SENP6Q9GZR1 1112 aaPredicted RBP11.62□□□□□ -0.55
CCDC65-202ENST00000320516 SENP2Q9HC62 589 aa11.62□□□□□ -0.55
CCDC65-202ENST00000320516 XPNPEP3Q9NQH7 507 aa11.62□□□□□ -0.55
CCDC65-202ENST00000320516 ZHX1Q9UKY1 873 aaPredicted RBP11.62□□□□□ -0.55
CCDC65-202ENST00000320516 ADCY6O43306 1168 aa11.61□□□□□ -0.55
CCDC65-202ENST00000320516 ADAMTS4O75173 837 aa11.61□□□□□ -0.55
CCDC65-202ENST00000320516 PARP1P09874 1014 aaKnown RBP11.61□□□□□ -0.55
CCDC65-202ENST00000320516 BAATQ14032 418 aaPredicted RBP11.61□□□□□ -0.55
CCDC65-202ENST00000320516 NECTIN1Q15223 517 aa11.61□□□□□ -0.55
CCDC65-202ENST00000320516 HABP4Q5JVS0 413 aaKnown RBP11.61□□□□□ -0.55
CCDC65-202ENST00000320516 NSMFQ6X4W1 530 aa11.61□□□□□ -0.55
CCDC65-202ENST00000320516 KIAA1211Q6ZU35 1233 aa11.61□□□□□ -0.55
CCDC65-202ENST00000320516 RALYLQ86SE5 291 aaKnown RBP11.61□□□□□ -0.55
CCDC65-202ENST00000320516 C7orf61Q8IZ16 206 aa11.61□□□□□ -0.55
CCDC65-202ENST00000320516 ADGRF4Q8IZF3 695 aa11.61□□□□□ -0.55
CCDC65-202ENST00000320516 STAG2Q8N3U4 1231 aa11.61□□□□□ -0.55
CCDC65-202ENST00000320516 MORC4Q8TE76 937 aa11.61□□□□□ -0.55
CCDC65-202ENST00000320516 FAM184BQ9ULE4 1060 aa11.61□□□□□ -0.55
CCDC65-202ENST00000320516 PALM3A6NDB9 673 aaPredicted RBP11.6□□□□□ -0.55
CCDC65-202ENST00000320516 ASB14A6NK59 587 aa11.6□□□□□ -0.55
CCDC65-202ENST00000320516 IFIT3O14879 490 aaKnown RBP11.6□□□□□ -0.55
CCDC65-202ENST00000320516 SLC27A2O14975 620 aa11.6□□□□□ -0.55
CCDC65-202ENST00000320516 PGK1P00558 417 aa11.6□□□□□ -0.55
CCDC65-202ENST00000320516 COL9A3Q14050 684 aaPredicted RBP11.6□□□□□ -0.55
CCDC65-202ENST00000320516 CDC37Q16543 378 aaPredicted RBP11.6□□□□□ -0.55
CCDC65-202ENST00000320516 CHRDL2Q6WN34 429 aa11.6□□□□□ -0.55
CCDC65-202ENST00000320516 CHST3Q7LGC8 479 aa11.6□□□□□ -0.55
CCDC65-202ENST00000320516 KLHDC9Q8NEP7 349 aa11.6□□□□□ -0.55
CCDC65-202ENST00000320516 IGDCC4Q8TDY8 1250 aa11.6□□□□□ -0.55
CCDC65-202ENST00000320516 JMJD4Q9H9V9 463 aa11.6□□□□□ -0.55
CCDC65-202ENST00000320516 MAD2L2Q9UI95 211 aa11.6□□□□□ -0.55
CCDC65-202ENST00000320516 DDX49Q9Y6V7 483 aaKnown RBP11.6□□□□□ -0.55
CCDC65-202ENST00000320516 KBTBD13C9JR72 458 aa11.59□□□□□ -0.55
CCDC65-202ENST00000320516 DUSP11O75319 330 aaKnown RBP11.59□□□□□ -0.55
CCDC65-202ENST00000320516 TROAPQ12815 778 aa11.59□□□□□ -0.55
CCDC65-202ENST00000320516 SNX17Q15036 470 aa11.59□□□□□ -0.55
CCDC65-202ENST00000320516 SLC35G1Q2M3R5 365 aa11.59□□□□□ -0.55
CCDC65-202ENST00000320516 CCDC144BQ3MJ40 725 aa11.59□□□□□ -0.55
CCDC65-202ENST00000320516 SLC30A10Q6XR72 485 aa11.59□□□□□ -0.55
CCDC65-202ENST00000320516 MTMR8Q96EF0 704 aa11.59□□□□□ -0.55
CCDC65-202ENST00000320516 ZMYND8Q9ULU4 1186 aaPredicted RBP11.59□□□□□ -0.55
CCDC65-202ENST00000320516 PHF24Q9UPV7 400 aa11.59□□□□□ -0.55
CCDC65-202ENST00000320516 SYNRGQ9UMZ2 1314 aa11.59□□□□□ -0.55
CCDC65-202ENST00000320516 LRRC37A2A6NM11 1700 aa11.59□□□□□ -0.55
CCDC65-202ENST00000320516 LOC102724159A0A0B4J2E5 919 aa11.59□□□□□ -0.55
CCDC65-202ENST00000320516 ADCYAP1R1P41586 468 aa11.59□□□□□ -0.55
CCDC65-202ENST00000320516 ATN1P54259 1190 aaPredicted RBP11.59□□□□□ -0.55
CCDC65-202ENST00000320516 RPS6P62753 249 aaKnown RBP11.59□□□□□ -0.55
CCDC65-202ENST00000320516 NKX3-2P78367 333 aa11.59□□□□□ -0.55
CCDC65-202ENST00000320516 GRM4Q14833 912 aa11.59□□□□□ -0.55
CCDC65-202ENST00000320516 PWP2Q15269 919 aaKnown RBP11.59□□□□□ -0.55
CCDC65-202ENST00000320516 QRICH1Q2TAL8 776 aa11.59□□□□□ -0.55
CCDC65-202ENST00000320516 CREB3L3Q68CJ9 461 aa11.59□□□□□ -0.55
CCDC65-202ENST00000320516 CCSAPQ6IQ19 270 aaPredicted RBP11.59□□□□□ -0.55
CCDC65-202ENST00000320516 SLC39A5Q6ZMH5 540 aa11.59□□□□□ -0.55
CCDC65-202ENST00000320516 RNF207Q6ZRF8 634 aa11.59□□□□□ -0.55
CCDC65-202ENST00000320516 RNF180Q86T96 592 aa11.59□□□□□ -0.55
CCDC65-202ENST00000320516 RGS22Q8NE09 1264 aa11.59□□□□□ -0.55
CCDC65-202ENST00000320516 MTA3Q9BTC8 594 aa11.59□□□□□ -0.55
CCDC65-202ENST00000320516 ANO2Q9NQ90 1003 aa11.59□□□□□ -0.55
CCDC65-202ENST00000320516 RBM27Q9P2N5 1060 aaKnown RBP11.59□□□□□ -0.55
CCDC65-202ENST00000320516 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.58□□□□□ -0.56
CCDC65-202ENST00000320516 ERICH2A1L162 156 aa11.58□□□□□ -0.56
CCDC65-202ENST00000320516 PTPDC1A2A3K4 754 aa11.58□□□□□ -0.56
CCDC65-202ENST00000320516 MYADML2A6NDP7 307 aa11.58□□□□□ -0.56
CCDC65-202ENST00000320516 KLRF2D3W0D1 207 aa11.58□□□□□ -0.56
CCDC65-202ENST00000320516 CTAGE5O15320 804 aa11.58□□□□□ -0.56
CCDC65-202ENST00000320516 CDC45O75419 566 aa11.58□□□□□ -0.56
CCDC65-202ENST00000320516 MYCNP04198 464 aaPredicted RBP11.58□□□□□ -0.56
CCDC65-202ENST00000320516 CST5P28325 142 aaPredicted RBP11.58□□□□□ -0.56
CCDC65-202ENST00000320516 ALDH5A1P51649 535 aaPredicted RBP11.58□□□□□ -0.56
CCDC65-202ENST00000320516 IRX5P78411 483 aaPredicted RBP11.58□□□□□ -0.56
CCDC65-202ENST00000320516 WTAPQ15007 396 aa11.58□□□□□ -0.56
CCDC65-202ENST00000320516 SART3Q15020 963 aaKnown RBP11.58□□□□□ -0.56
CCDC65-202ENST00000320516 USH1GQ495M9 461 aa11.58□□□□□ -0.56
CCDC65-202ENST00000320516 TMEM67Q5HYA8 995 aa11.58□□□□□ -0.56
CCDC65-202ENST00000320516 C1orf53Q5VUE5 145 aa11.58□□□□□ -0.56
CCDC65-202ENST00000320516 TAPT1Q6NXT6 567 aa11.58□□□□□ -0.56
CCDC65-202ENST00000320516 GDF15Q99988 308 aa11.58□□□□□ -0.56
CCDC65-202ENST00000320516 TSEN34Q9BSV6 310 aaKnown RBP11.58□□□□□ -0.56
CCDC65-202ENST00000320516 MAF1Q9H063 256 aa11.58□□□□□ -0.56
CCDC65-202ENST00000320516 UPF3AQ9H1J1 476 aaKnown RBP11.58□□□□□ -0.56
CCDC65-202ENST00000320516 LY9Q9HBG7 655 aa11.58□□□□□ -0.56
CCDC65-202ENST00000320516 ADD3Q9UEY8 706 aaKnown RBP11.58□□□□□ -0.56
CCDC65-202ENST00000320516 TRIOBPQ9H2D6 2365 aa11.58□□□□□ -0.56
CCDC65-202ENST00000320516 SYN1P17600 705 aa11.57□□□□□ -0.56
CCDC65-202ENST00000320516 EDNRBP24530 442 aa11.57□□□□□ -0.56
CCDC65-202ENST00000320516 CALML3P27482 149 aa11.57□□□□□ -0.56
CCDC65-202ENST00000320516 GJA9P57773 515 aa11.57□□□□□ -0.56
CCDC65-202ENST00000320516 RTP1P59025 263 aa11.57□□□□□ -0.56
CCDC65-202ENST00000320516 TBC1D5Q92609 795 aa11.57□□□□□ -0.56
CCDC65-202ENST00000320516 FERMT2Q96AC1 680 aa11.57□□□□□ -0.56
CCDC65-202ENST00000320516 RIOX1Q9H6W3 641 aa11.57□□□□□ -0.56
CCDC65-202ENST00000320516 VAT1LQ9HCJ6 419 aa11.57□□□□□ -0.56
CCDC65-202ENST00000320516 GPHNQ9NQX3 736 aaPredicted RBP11.57□□□□□ -0.56
CCDC65-202ENST00000320516 PDGFCQ9NRA1 345 aa11.57□□□□□ -0.56
CCDC65-202ENST00000320516 GNEQ9Y223 722 aaKnown RBP11.57□□□□□ -0.56
CCDC65-202ENST00000320516 ABCB11O95342 1321 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms