RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 C7orf61Q8IZ16 206 aa17.1■□□□□ 0.33
PPP1CA-201ENST00000312989 MTMR8Q96EF0 704 aa17.1■□□□□ 0.33
PPP1CA-201ENST00000312989 UBAC1Q9BSL1 405 aa17.1■□□□□ 0.33
PPP1CA-201ENST00000312989 MAD2L2Q9UI95 211 aa17.1■□□□□ 0.33
PPP1CA-201ENST00000312989 CNPY2Q9Y2B0 182 aa17.1■□□□□ 0.33
PPP1CA-201ENST00000312989 SZT2Q5T011 3432 aa17.09■□□□□ 0.33
PPP1CA-201ENST00000312989 MYADML2A6NDP7 307 aa17.09■□□□□ 0.33
PPP1CA-201ENST00000312989 PGK1P00558 417 aa17.09■□□□□ 0.33
PPP1CA-201ENST00000312989 TROAPQ12815 778 aa17.09■□□□□ 0.33
PPP1CA-201ENST00000312989 BAATQ14032 418 aaPredicted RBP17.09■□□□□ 0.33
PPP1CA-201ENST00000312989 IFIT1BQ5T764 474 aaKnown RBP17.09■□□□□ 0.33
PPP1CA-201ENST00000312989 CHRDL2Q6WN34 429 aa17.09■□□□□ 0.33
PPP1CA-201ENST00000312989 CHST3Q7LGC8 479 aa17.09■□□□□ 0.33
PPP1CA-201ENST00000312989 ADGRF4Q8IZF3 695 aa17.09■□□□□ 0.33
PPP1CA-201ENST00000312989 KLHDC9Q8NEP7 349 aa17.09■□□□□ 0.33
PPP1CA-201ENST00000312989 IGDCC4Q8TDY8 1250 aa17.09■□□□□ 0.33
PPP1CA-201ENST00000312989 SENP6Q9GZR1 1112 aaPredicted RBP17.09■□□□□ 0.33
PPP1CA-201ENST00000312989 JMJD4Q9H9V9 463 aa17.09■□□□□ 0.33
PPP1CA-201ENST00000312989 XPNPEP3Q9NQH7 507 aa17.09■□□□□ 0.33
PPP1CA-201ENST00000312989 GPHNQ9NQX3 736 aaPredicted RBP17.09■□□□□ 0.33
PPP1CA-201ENST00000312989 RBM27Q9P2N5 1060 aaKnown RBP17.09■□□□□ 0.33
PPP1CA-201ENST00000312989 ZHX1Q9UKY1 873 aaPredicted RBP17.09■□□□□ 0.33
PPP1CA-201ENST00000312989 NR2E3Q9Y5X4 410 aa17.09■□□□□ 0.33
PPP1CA-201ENST00000312989 SYNRGQ9UMZ2 1314 aa17.09■□□□□ 0.33
PPP1CA-201ENST00000312989 SMCHD1A6NHR9 2005 aa17.08■□□□□ 0.33
PPP1CA-201ENST00000312989 PALM3A6NDB9 673 aaPredicted RBP17.08■□□□□ 0.32
PPP1CA-201ENST00000312989 SLC27A2O14975 620 aa17.08■□□□□ 0.32
PPP1CA-201ENST00000312989 PPP1R11O60927 126 aaPredicted RBP17.08■□□□□ 0.32
PPP1CA-201ENST00000312989 SLC34A2O95436 690 aa17.08■□□□□ 0.32
PPP1CA-201ENST00000312989 RARBP10826 455 aa17.08■□□□□ 0.32
PPP1CA-201ENST00000312989 PTGS1P23219 599 aa17.08■□□□□ 0.32
PPP1CA-201ENST00000312989 NKX3-2P78367 333 aa17.08■□□□□ 0.32
PPP1CA-201ENST00000312989 CDC37Q16543 378 aaPredicted RBP17.08■□□□□ 0.32
PPP1CA-201ENST00000312989 TMEM63BQ5T3F8 832 aa17.08■□□□□ 0.32
PPP1CA-201ENST00000312989 NSMFQ6X4W1 530 aa17.08■□□□□ 0.32
PPP1CA-201ENST00000312989 ARRDC4Q8NCT1 418 aa17.08■□□□□ 0.32
PPP1CA-201ENST00000312989 NCOA7Q8NI08 942 aa17.08■□□□□ 0.32
PPP1CA-201ENST00000312989 GDF15Q99988 308 aa17.08■□□□□ 0.32
PPP1CA-201ENST00000312989 ABHD16BQ9H3Z7 469 aa17.08■□□□□ 0.32
PPP1CA-201ENST00000312989 PHF24Q9UPV7 400 aa17.08■□□□□ 0.32
PPP1CA-201ENST00000312989 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.07■□□□□ 0.32
PPP1CA-201ENST00000312989 OPLAHO14841 1288 aa17.07■□□□□ 0.32
PPP1CA-201ENST00000312989 QRICH1Q2TAL8 776 aa17.07■□□□□ 0.32
PPP1CA-201ENST00000312989 CCDC144BQ3MJ40 725 aa17.07■□□□□ 0.32
PPP1CA-201ENST00000312989 CREB3L3Q68CJ9 461 aa17.07■□□□□ 0.32
PPP1CA-201ENST00000312989 TAPT1Q6NXT6 567 aa17.07■□□□□ 0.32
PPP1CA-201ENST00000312989 UPF3AQ9H1J1 476 aaKnown RBP17.07■□□□□ 0.32
PPP1CA-201ENST00000312989 FAM184BQ9ULE4 1060 aa17.07■□□□□ 0.32
PPP1CA-201ENST00000312989 ZMYND8Q9ULU4 1186 aaPredicted RBP17.07■□□□□ 0.32
PPP1CA-201ENST00000312989 CYTH3O43739 400 aa17.06■□□□□ 0.32
PPP1CA-201ENST00000312989 DUSP11O75319 330 aaKnown RBP17.06■□□□□ 0.32
PPP1CA-201ENST00000312989 PARP1P09874 1014 aaKnown RBP17.06■□□□□ 0.32
PPP1CA-201ENST00000312989 EDNRBP24530 442 aa17.06■□□□□ 0.32
PPP1CA-201ENST00000312989 CST5P28325 142 aaPredicted RBP17.06■□□□□ 0.32
PPP1CA-201ENST00000312989 ADCYAP1R1P41586 468 aa17.06■□□□□ 0.32
PPP1CA-201ENST00000312989 ATN1P54259 1190 aaPredicted RBP17.06■□□□□ 0.32
PPP1CA-201ENST00000312989 RPS6P62753 249 aaKnown RBP17.06■□□□□ 0.32
PPP1CA-201ENST00000312989 GRM4Q14833 912 aa17.06■□□□□ 0.32
PPP1CA-201ENST00000312989 C1orf53Q5VUE5 145 aa17.06■□□□□ 0.32
PPP1CA-201ENST00000312989 TBC1D5Q92609 795 aa17.06■□□□□ 0.32
PPP1CA-201ENST00000312989 LY9Q9HBG7 655 aa17.06■□□□□ 0.32
PPP1CA-201ENST00000312989 COL20A1Q9P218 1284 aa17.06■□□□□ 0.32
PPP1CA-201ENST00000312989 GNEQ9Y223 722 aaKnown RBP17.06■□□□□ 0.32
PPP1CA-201ENST00000312989 IFIT3O14879 490 aaKnown RBP17.05■□□□□ 0.32
PPP1CA-201ENST00000312989 SYN1P17600 705 aa17.05■□□□□ 0.32
PPP1CA-201ENST00000312989 FXR1P51114 621 aaKnown RBP eCLIP17.05■□□□□ 0.32
PPP1CA-201ENST00000312989 ALDH5A1P51649 535 aaPredicted RBP17.05■□□□□ 0.32
PPP1CA-201ENST00000312989 GHRHRQ02643 423 aa17.05■□□□□ 0.32
PPP1CA-201ENST00000312989 TRDNQ13061 729 aa17.05■□□□□ 0.32
PPP1CA-201ENST00000312989 SLC39A5Q6ZMH5 540 aa17.05■□□□□ 0.32
PPP1CA-201ENST00000312989 CCDC136Q96JN2 1154 aa17.05■□□□□ 0.32
PPP1CA-201ENST00000312989 PDGFCQ9NRA1 345 aa17.05■□□□□ 0.32
PPP1CA-201ENST00000312989 ASB14A6NK59 587 aa17.04■□□□□ 0.32
PPP1CA-201ENST00000312989 KBTBD13C9JR72 458 aa17.04■□□□□ 0.32
PPP1CA-201ENST00000312989 KLRF2D3W0D1 207 aa17.04■□□□□ 0.32
PPP1CA-201ENST00000312989 GJA9P57773 515 aa17.04■□□□□ 0.32
PPP1CA-201ENST00000312989 RTP1P59025 263 aa17.04■□□□□ 0.32
PPP1CA-201ENST00000312989 USH1GQ495M9 461 aa17.04■□□□□ 0.32
PPP1CA-201ENST00000312989 RALYLQ86SE5 291 aaKnown RBP17.04■□□□□ 0.32
PPP1CA-201ENST00000312989 FBXO16Q8IX29 292 aaPredicted RBP17.04■□□□□ 0.32
PPP1CA-201ENST00000312989 RGS22Q8NE09 1264 aa17.04■□□□□ 0.32
PPP1CA-201ENST00000312989 RIOX1Q9H6W3 641 aa17.04■□□□□ 0.32
PPP1CA-201ENST00000312989 ANO2Q9NQ90 1003 aa17.04■□□□□ 0.32
PPP1CA-201ENST00000312989 PNMA2Q9UL42 364 aa17.04■□□□□ 0.32
PPP1CA-201ENST00000312989 A0A1W2PQ45 241 aaPredicted RBP17.03■□□□□ 0.32
PPP1CA-201ENST00000312989 A0A1W2PQY0 241 aa17.03■□□□□ 0.32
PPP1CA-201ENST00000312989 SH2B2O14492 632 aaPredicted RBP17.03■□□□□ 0.32
PPP1CA-201ENST00000312989 CDC45O75419 566 aa17.03■□□□□ 0.32
PPP1CA-201ENST00000312989 SMPD1P17405 629 aa17.03■□□□□ 0.32
PPP1CA-201ENST00000312989 RNF207Q6ZRF8 634 aa17.03■□□□□ 0.32
PPP1CA-201ENST00000312989 RASEFQ8IZ41 740 aa17.03■□□□□ 0.32
PPP1CA-201ENST00000312989 FERMT2Q96AC1 680 aa17.03■□□□□ 0.32
PPP1CA-201ENST00000312989 MTA3Q9BTC8 594 aa17.03■□□□□ 0.32
PPP1CA-201ENST00000312989 LOC102724159A0A0B4J2E5 919 aa17.02■□□□□ 0.32
PPP1CA-201ENST00000312989 RBM47A0AV96 593 aaKnown RBP17.02■□□□□ 0.32
PPP1CA-201ENST00000312989 PRC1O43663 620 aa17.02■□□□□ 0.32
PPP1CA-201ENST00000312989 ABCB11O95342 1321 aa17.02■□□□□ 0.32
PPP1CA-201ENST00000312989 MAGEA10P43363 369 aaPredicted RBP17.02■□□□□ 0.32
PPP1CA-201ENST00000312989 ACLYP53396 1101 aa17.02■□□□□ 0.32
PPP1CA-201ENST00000312989 WTAPQ15007 396 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms