RNA–Protein interactions for RNA: ENST00000302273.2

VPREB1-201, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene VPREB1, Length 626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-201ENST00000302273 NBPF11Q86T75 865 aa10.22□□□□□ -0.77
VPREB1-201ENST00000302273 CPXCR1Q8N123 301 aa10.22□□□□□ -0.77
VPREB1-201ENST00000302273 INTS4Q96HW7 963 aaKnown RBP10.22□□□□□ -0.77
VPREB1-201ENST00000302273 PAGR1Q9BTK6 254 aa10.22□□□□□ -0.77
VPREB1-201ENST00000302273 NAP1L2Q9ULW6 460 aaPredicted RBP10.22□□□□□ -0.77
VPREB1-201ENST00000302273 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.22□□□□□ -0.77
VPREB1-201ENST00000302273 V9GY48 417 aaPredicted RBP10.22□□□□□ -0.77
VPREB1-201ENST00000302273 PTPRFP10586 1907 aa10.21□□□□□ -0.77
VPREB1-201ENST00000302273 TNRC18O15417 2968 aaPredicted RBP10.21□□□□□ -0.77
VPREB1-201ENST00000302273 ESYT2A0FGR8 921 aa10.21□□□□□ -0.77
VPREB1-201ENST00000302273 PIK3CDO00329 1044 aa10.21□□□□□ -0.77
VPREB1-201ENST00000302273 PLEKHA8P1O95397 391 aa10.21□□□□□ -0.77
VPREB1-201ENST00000302273 CAPN2P17655 700 aa10.21□□□□□ -0.77
VPREB1-201ENST00000302273 RXRAP19793 462 aa10.21□□□□□ -0.77
VPREB1-201ENST00000302273 GNA11P29992 359 aa10.21□□□□□ -0.77
VPREB1-201ENST00000302273 GRB14Q14449 540 aa10.21□□□□□ -0.77
VPREB1-201ENST00000302273 GPR142Q7Z601 462 aa10.21□□□□□ -0.77
VPREB1-201ENST00000302273 ZNF467Q7Z7K2 595 aaPredicted RBP10.21□□□□□ -0.77
VPREB1-201ENST00000302273 NCAPG2Q86XI2 1143 aa10.21□□□□□ -0.77
VPREB1-201ENST00000302273 CCDC148Q8NFR7 591 aa10.21□□□□□ -0.77
VPREB1-201ENST00000302273 PXYLP1Q8TE99 480 aa10.21□□□□□ -0.77
VPREB1-201ENST00000302273 TRERF1Q96PN7 1200 aa10.21□□□□□ -0.77
VPREB1-201ENST00000302273 PIGSQ96S52 555 aa10.21□□□□□ -0.77
VPREB1-201ENST00000302273 MPHOSPH6Q99547 160 aaKnown RBP10.21□□□□□ -0.77
VPREB1-201ENST00000302273 NUDT12Q9BQG2 462 aa10.21□□□□□ -0.77
VPREB1-201ENST00000302273 R3HDMLQ9H3Y0 253 aa10.21□□□□□ -0.77
VPREB1-201ENST00000302273 EFCC1Q9HA90 598 aa10.21□□□□□ -0.77
VPREB1-201ENST00000302273 RAVER2Q9HCJ3 691 aaKnown RBP10.21□□□□□ -0.77
VPREB1-201ENST00000302273 VAT1LQ9HCJ6 419 aa10.21□□□□□ -0.77
VPREB1-201ENST00000302273 BARHL2Q9NY43 387 aa10.21□□□□□ -0.77
VPREB1-201ENST00000302273 DNAJC25-GNG10A0A024R161 153 aa10.2□□□□□ -0.78
VPREB1-201ENST00000302273 SCG2P13521 617 aa10.2□□□□□ -0.78
VPREB1-201ENST00000302273 RGS2P41220 211 aa10.2□□□□□ -0.78
VPREB1-201ENST00000302273 CCT2P78371 535 aaKnown RBP10.2□□□□□ -0.78
VPREB1-201ENST00000302273 CUL4AQ13619 759 aa10.2□□□□□ -0.78
VPREB1-201ENST00000302273 MORN1Q5T089 497 aa10.2□□□□□ -0.78
VPREB1-201ENST00000302273 CCDC144CPQ8IYA2 1237 aa10.2□□□□□ -0.78
VPREB1-201ENST00000302273 ANKRD35Q8N283 1001 aa10.2□□□□□ -0.78
VPREB1-201ENST00000302273 DNERQ8NFT8 737 aa10.2□□□□□ -0.78
VPREB1-201ENST00000302273 BICD2Q8TD16 824 aa10.2□□□□□ -0.78
VPREB1-201ENST00000302273 CNTNAP5Q8WYK1 1306 aa10.2□□□□□ -0.78
VPREB1-201ENST00000302273 USP6NLQ92738 828 aa10.2□□□□□ -0.78
VPREB1-201ENST00000302273 DDX11Q96FC9 970 aa10.2□□□□□ -0.78
VPREB1-201ENST00000302273 TMX3Q96JJ7 454 aa10.2□□□□□ -0.78
VPREB1-201ENST00000302273 AGBL1Q96MI9 1066 aa10.2□□□□□ -0.78
VPREB1-201ENST00000302273 ZMYND12Q9H0C1 365 aa10.2□□□□□ -0.78
VPREB1-201ENST00000302273 PORCNQ9H237 461 aa10.2□□□□□ -0.78
VPREB1-201ENST00000302273 CWC22Q9HCG8 908 aaKnown RBP10.2□□□□□ -0.78
VPREB1-201ENST00000302273 RNF146Q9NTX7 359 aa10.2□□□□□ -0.78
VPREB1-201ENST00000302273 ADD3Q9UEY8 706 aaKnown RBP10.2□□□□□ -0.78
VPREB1-201ENST00000302273 SRRDQ9UH36 339 aa10.2□□□□□ -0.78
VPREB1-201ENST00000302273 NRBP1Q9UHY1 535 aa10.2□□□□□ -0.78
VPREB1-201ENST00000302273 TSKSQ9UJT2 592 aa10.2□□□□□ -0.78
VPREB1-201ENST00000302273 GJD2Q9UKL4 321 aa10.2□□□□□ -0.78
VPREB1-201ENST00000302273 RIPK3Q9Y572 518 aa10.2□□□□□ -0.78
VPREB1-201ENST00000302273 K7ELQ4 463 aaPredicted RBP10.19□□□□□ -0.78
VPREB1-201ENST00000302273 FOSP01100 380 aaPredicted RBP10.19□□□□□ -0.78
VPREB1-201ENST00000302273 ALAS1P13196 640 aa10.19□□□□□ -0.78
VPREB1-201ENST00000302273 CALML3P27482 149 aa10.19□□□□□ -0.78
VPREB1-201ENST00000302273 HSD17B4P51659 736 aa10.19□□□□□ -0.78
VPREB1-201ENST00000302273 MAP2K5Q13163 448 aa10.19□□□□□ -0.78
VPREB1-201ENST00000302273 SLC35G1Q2M3R5 365 aa10.19□□□□□ -0.78
VPREB1-201ENST00000302273 OLFML2BQ68BL8 750 aa10.19□□□□□ -0.78
VPREB1-201ENST00000302273 XRRA1Q6P2D8 792 aa10.19□□□□□ -0.78
VPREB1-201ENST00000302273 CCDC174Q6PII3 467 aa10.19□□□□□ -0.78
VPREB1-201ENST00000302273 RNF207Q6ZRF8 634 aa10.19□□□□□ -0.78
VPREB1-201ENST00000302273 RASGRP2Q7LDG7 609 aa10.19□□□□□ -0.78
VPREB1-201ENST00000302273 CTU1Q7Z7A3 348 aaKnown RBP10.19□□□□□ -0.78
VPREB1-201ENST00000302273 HOMER1Q86YM7 354 aa10.19□□□□□ -0.78
VPREB1-201ENST00000302273 SMARCC2Q8TAQ2 1214 aa10.19□□□□□ -0.78
VPREB1-201ENST00000302273 CLEC4DQ8WXI8 215 aa10.19□□□□□ -0.78
VPREB1-201ENST00000302273 CUL5Q93034 780 aa10.19□□□□□ -0.78
VPREB1-201ENST00000302273 TRIM47Q96LD4 638 aa10.19□□□□□ -0.78
VPREB1-201ENST00000302273 MMP19Q99542 508 aa10.19□□□□□ -0.78
VPREB1-201ENST00000302273 PSTPIP2Q9H939 334 aa10.19□□□□□ -0.78
VPREB1-201ENST00000302273 NCOA5Q9HCD5 579 aaKnown RBP10.19□□□□□ -0.78
VPREB1-201ENST00000302273 MYH4Q9Y623 1939 aa10.18□□□□□ -0.78
VPREB1-201ENST00000302273 GCOM1H8Y6P7 765 aaPredicted RBP10.18□□□□□ -0.78
VPREB1-201ENST00000302273 PPP1R11O60927 126 aaPredicted RBP10.18□□□□□ -0.78
VPREB1-201ENST00000302273 POLR2MP0CAP2 368 aa10.18□□□□□ -0.78
VPREB1-201ENST00000302273 STK3Q13188 491 aa10.18□□□□□ -0.78
VPREB1-201ENST00000302273 BECN1Q14457 450 aa10.18□□□□□ -0.78
VPREB1-201ENST00000302273 PKN1Q16512 942 aa10.18□□□□□ -0.78
VPREB1-201ENST00000302273 SAMD1Q6SPF0 538 aaPredicted RBP10.18□□□□□ -0.78
VPREB1-201ENST00000302273 MAMDC4Q6UXC1 1216 aa10.18□□□□□ -0.78
VPREB1-201ENST00000302273 DPP9Q86TI2 863 aa10.18□□□□□ -0.78
VPREB1-201ENST00000302273 HSCBQ8IWL3 235 aa10.18□□□□□ -0.78
VPREB1-201ENST00000302273 CCDC82Q8N4S0 544 aa10.18□□□□□ -0.78
VPREB1-201ENST00000302273 NSUN7Q8NE18 718 aaKnown RBP10.18□□□□□ -0.78
VPREB1-201ENST00000302273 IWS1Q96ST2 819 aa10.18□□□□□ -0.78
VPREB1-201ENST00000302273 APBA2Q99767 749 aa10.18□□□□□ -0.78
VPREB1-201ENST00000302273 SLC26A6Q9BXS9 759 aa10.18□□□□□ -0.78
VPREB1-201ENST00000302273 CPVLQ9H3G5 476 aa10.18□□□□□ -0.78
VPREB1-201ENST00000302273 C6orf50Q9HD87 102 aa10.18□□□□□ -0.78
VPREB1-201ENST00000302273 A1CFQ9NQ94 594 aaKnown RBP10.18□□□□□ -0.78
VPREB1-201ENST00000302273 CYP39A1Q9NYL5 469 aa10.18□□□□□ -0.78
VPREB1-201ENST00000302273 A0A0G2JMZ2 1700 aa10.17□□□□□ -0.78
VPREB1-201ENST00000302273 ASB14A6NK59 587 aa10.17□□□□□ -0.78
VPREB1-201ENST00000302273 STAM2O75886 525 aa10.17□□□□□ -0.78
VPREB1-201ENST00000302273 CTDNEP1O95476 244 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms