RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 TRAPPC10P48553 1259 aa16.38■□□□□ 0.21
CCNF-201ENST00000293968 PFKFB3Q16875 520 aaPredicted RBP16.38■□□□□ 0.21
CCNF-201ENST00000293968 C8orf74Q6P047 294 aa16.38■□□□□ 0.21
CCNF-201ENST00000293968 CABP7Q86V35 215 aa16.38■□□□□ 0.21
CCNF-201ENST00000293968 STAG2Q8N3U4 1231 aa16.38■□□□□ 0.21
CCNF-201ENST00000293968 P2RX5Q93086 422 aa16.38■□□□□ 0.21
CCNF-201ENST00000293968 SLC4A9Q96Q91 983 aa16.38■□□□□ 0.21
CCNF-201ENST00000293968 NUP58Q9BVL2 599 aa16.38■□□□□ 0.21
CCNF-201ENST00000293968 CRNKL1Q9BZJ0 848 aaKnown RBP16.38■□□□□ 0.21
CCNF-201ENST00000293968 NDUFAB1O14561 156 aa16.38■□□□□ 0.21
CCNF-201ENST00000293968 NOP2P46087 812 aaKnown RBP16.38■□□□□ 0.21
CCNF-201ENST00000293968 MNAT1P51948 309 aa16.38■□□□□ 0.21
CCNF-201ENST00000293968 TADA2BQ86TJ2 420 aa16.38■□□□□ 0.21
CCNF-201ENST00000293968 TNFRSF25Q93038 417 aa16.38■□□□□ 0.21
CCNF-201ENST00000293968 CAPN6Q9Y6Q1 641 aa16.38■□□□□ 0.21
CCNF-201ENST00000293968 CCNT1O60563 726 aaKnown RBP16.38■□□□□ 0.21
CCNF-201ENST00000293968 KIAA0754O94854 1291 aa16.38■□□□□ 0.21
CCNF-201ENST00000293968 EIF4A3P38919 411 aaKnown RBP16.38■□□□□ 0.21
CCNF-201ENST00000293968 GUCY2FP51841 1108 aa16.38■□□□□ 0.21
CCNF-201ENST00000293968 VAV2P52735 878 aa16.38■□□□□ 0.21
CCNF-201ENST00000293968 TFAP4Q01664 338 aa16.38■□□□□ 0.21
CCNF-201ENST00000293968 EFCAB13Q8IY85 973 aa16.38■□□□□ 0.21
CCNF-201ENST00000293968 TRIM58Q8NG06 486 aa16.38■□□□□ 0.21
CCNF-201ENST00000293968 ACSBG1Q96GR2 724 aa16.38■□□□□ 0.21
CCNF-201ENST00000293968 CDK5RAP3Q96JB5 506 aa16.38■□□□□ 0.21
CCNF-201ENST00000293968 MTA3Q9BTC8 594 aa16.38■□□□□ 0.21
CCNF-201ENST00000293968 A0A1W2PQC6 194 aa16.37■□□□□ 0.21
CCNF-201ENST00000293968 ESYT3A0FGR9 886 aa16.37■□□□□ 0.21
CCNF-201ENST00000293968 BICDL2A1A5D9 508 aa16.37■□□□□ 0.21
CCNF-201ENST00000293968 OPA1O60313 960 aa16.37■□□□□ 0.21
CCNF-201ENST00000293968 PRPF6O94906 941 aaKnown RBP16.37■□□□□ 0.21
CCNF-201ENST00000293968 MAGEA1P43355 309 aa16.37■□□□□ 0.21
CCNF-201ENST00000293968 IRAK1P51617 712 aa16.37■□□□□ 0.21
CCNF-201ENST00000293968 PDCLQ13371 301 aa16.37■□□□□ 0.21
CCNF-201ENST00000293968 ADAMTS7Q9UKP4 1686 aa16.37■□□□□ 0.21
CCNF-201ENST00000293968 SSBP05455 408 aaKnown RBP eCLIP16.37■□□□□ 0.21
CCNF-201ENST00000293968 SRGNP10124 158 aa16.37■□□□□ 0.21
CCNF-201ENST00000293968 TECP42680 631 aa16.37■□□□□ 0.21
CCNF-201ENST00000293968 STK4Q13043 487 aa16.37■□□□□ 0.21
CCNF-201ENST00000293968 SH2D3CQ8N5H7 860 aa16.37■□□□□ 0.21
CCNF-201ENST00000293968 NLRC4Q9NPP4 1024 aa16.37■□□□□ 0.21
CCNF-201ENST00000293968 PCDHA13Q9Y5I0 950 aa16.37■□□□□ 0.21
CCNF-201ENST00000293968 FAM169AQ9Y6X4 670 aa16.37■□□□□ 0.21
CCNF-201ENST00000293968 PDS5AQ29RF7 1337 aaKnown RBP16.37■□□□□ 0.21
CCNF-201ENST00000293968 TARSL2A2RTX5 802 aaKnown RBP16.37■□□□□ 0.21
CCNF-201ENST00000293968 AARSP49588 968 aaKnown RBP eCLIP16.37■□□□□ 0.21
CCNF-201ENST00000293968 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.37■□□□□ 0.21
CCNF-201ENST00000293968 TSGA10Q9BZW7 698 aa16.37■□□□□ 0.21
CCNF-201ENST00000293968 RPS6KA5O75582 802 aa16.36■□□□□ 0.21
CCNF-201ENST00000293968 RASSF7Q02833 373 aa16.36■□□□□ 0.21
CCNF-201ENST00000293968 PTPROQ16827 1216 aa16.36■□□□□ 0.21
CCNF-201ENST00000293968 RNF187Q5TA31 235 aaPredicted RBP16.36■□□□□ 0.21
CCNF-201ENST00000293968 UIMC1Q96RL1 719 aa16.36■□□□□ 0.21
CCNF-201ENST00000293968 PCDHA4Q9UN74 947 aa16.36■□□□□ 0.21
CCNF-201ENST00000293968 KCPQ6ZWJ8 1503 aa16.36■□□□□ 0.21
CCNF-201ENST00000293968 TJP1Q07157 1748 aa16.36■□□□□ 0.21
CCNF-201ENST00000293968 LMTK3Q96Q04 1460 aa16.36■□□□□ 0.21
CCNF-201ENST00000293968 KIF11P52732 1056 aa16.36■□□□□ 0.21
CCNF-201ENST00000293968 PPFIA1Q13136 1202 aa16.36■□□□□ 0.21
CCNF-201ENST00000293968 ARL6IP4Q66PJ3 421 aaKnown RBP16.36■□□□□ 0.21
CCNF-201ENST00000293968 PNMA1Q8ND90 353 aa16.36■□□□□ 0.21
CCNF-201ENST00000293968 SPATA4Q8NEY3 305 aa16.36■□□□□ 0.21
CCNF-201ENST00000293968 ZNF507Q8TCN5 953 aa16.36■□□□□ 0.21
CCNF-201ENST00000293968 RIOK1Q9BRS2 568 aaKnown RBP16.36■□□□□ 0.21
CCNF-201ENST00000293968 A0A087WUV0 522 aaPredicted RBP16.35■□□□□ 0.21
CCNF-201ENST00000293968 MARCH6O60337 910 aa16.35■□□□□ 0.21
CCNF-201ENST00000293968 INPP5BP32019 993 aa16.35■□□□□ 0.21
CCNF-201ENST00000293968 ATP6V1AP38606 617 aa16.35■□□□□ 0.21
CCNF-201ENST00000293968 NAPAP54920 295 aa16.35■□□□□ 0.21
CCNF-201ENST00000293968 TMC4Q7Z404 712 aa16.35■□□□□ 0.21
CCNF-201ENST00000293968 AMOTL1Q8IY63 956 aa16.35■□□□□ 0.21
CCNF-201ENST00000293968 CCDC170Q8IYT3 715 aa16.35■□□□□ 0.21
CCNF-201ENST00000293968 CCDC24Q8N4L8 307 aa16.35■□□□□ 0.21
CCNF-201ENST00000293968 MSL3Q8N5Y2 521 aaKnown RBP16.35■□□□□ 0.21
CCNF-201ENST00000293968 DYNLL2Q96FJ2 89 aa16.35■□□□□ 0.21
CCNF-201ENST00000293968 MS4A14Q96JA4 679 aa16.35■□□□□ 0.21
CCNF-201ENST00000293968 BTG4Q9NY30 223 aa16.35■□□□□ 0.21
CCNF-201ENST00000293968 SNX12Q9UMY4 172 aa16.35■□□□□ 0.21
CCNF-201ENST00000293968 MYH8P13535 1937 aa16.35■□□□□ 0.21
CCNF-201ENST00000293968 NAALADL2Q58DX5 795 aa16.35■□□□□ 0.21
CCNF-201ENST00000293968 TTI2Q6NXR4 508 aa16.35■□□□□ 0.21
CCNF-201ENST00000293968 MAATS1Q7Z4T9 603 aa16.35■□□□□ 0.21
CCNF-201ENST00000293968 ZNF34Q8IZ26 560 aa16.35■□□□□ 0.21
CCNF-201ENST00000293968 AGPSO00116 658 aa16.35■□□□□ 0.21
CCNF-201ENST00000293968 USP17L8P0C7I0 530 aa16.35■□□□□ 0.21
CCNF-201ENST00000293968 CCNE1P24864 410 aa16.35■□□□□ 0.21
CCNF-201ENST00000293968 TXKP42681 527 aa16.35■□□□□ 0.21
CCNF-201ENST00000293968 EXOC5O00471 708 aa16.34■□□□□ 0.21
CCNF-201ENST00000293968 TXNRD1Q16881 649 aa16.34■□□□□ 0.21
CCNF-201ENST00000293968 CFAP58Q5T655 872 aa16.34■□□□□ 0.21
CCNF-201ENST00000293968 FBXW10Q5XX13 1052 aa16.34■□□□□ 0.21
CCNF-201ENST00000293968 ARL8AQ96BM9 186 aa16.34■□□□□ 0.21
CCNF-201ENST00000293968 OSBPL9Q96SU4 736 aa16.34■□□□□ 0.21
CCNF-201ENST00000293968 HYOU1Q9Y4L1 999 aa16.34■□□□□ 0.21
CCNF-201ENST00000293968 NID2Q14112 1375 aa16.34■□□□□ 0.21
CCNF-201ENST00000293968 HLTFQ14527 1009 aaKnown RBP eCLIP16.34■□□□□ 0.21
CCNF-201ENST00000293968 DZIP1Q86YF9 867 aaKnown RBP16.34■□□□□ 0.21
CCNF-201ENST00000293968 NOC3LQ8WTT2 800 aaKnown RBP16.34■□□□□ 0.21
CCNF-201ENST00000293968 DHTKD1Q96HY7 919 aaPredicted RBP16.34■□□□□ 0.21
CCNF-201ENST00000293968 ANO9A1A5B4 782 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms