RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 KIF20AO95235 890 aa17.59■□□□□ 0.41
RFX1-201ENST00000254325 CYP26C1Q6V0L0 522 aa17.59■□□□□ 0.41
RFX1-201ENST00000254325 PCDHA12Q9UN75 941 aa17.59■□□□□ 0.41
RFX1-201ENST00000254325 TRIM49BA6NDI0 452 aa17.58■□□□□ 0.41
RFX1-201ENST00000254325 C15orf52Q6ZUT6 534 aaKnown RBP17.58■□□□□ 0.41
RFX1-201ENST00000254325 NAP1L4Q99733 375 aaKnown RBP17.58■□□□□ 0.41
RFX1-201ENST00000254325 MAGEF1Q9HAY2 307 aa17.58■□□□□ 0.41
RFX1-201ENST00000254325 MYO5AQ9Y4I1 1855 aaKnown RBP17.58■□□□□ 0.41
RFX1-201ENST00000254325 PDHBP11177 359 aa17.58■□□□□ 0.41
RFX1-201ENST00000254325 HOXA10P31260 410 aaPredicted RBP17.58■□□□□ 0.41
RFX1-201ENST00000254325 SARSP49591 514 aaKnown RBP17.58■□□□□ 0.41
RFX1-201ENST00000254325 POTEDQ86YR6 584 aa17.58■□□□□ 0.41
RFX1-201ENST00000254325 PI4KBQ9UBF8 816 aa17.58■□□□□ 0.41
RFX1-201ENST00000254325 MYH2Q9UKX2 1941 aa17.58■□□□□ 0.4
RFX1-201ENST00000254325 CYTH3O43739 400 aa17.58■□□□□ 0.4
RFX1-201ENST00000254325 CD44P16070 742 aaKnown RBP17.58■□□□□ 0.4
RFX1-201ENST00000254325 NAA30Q147X3 362 aaPredicted RBP17.58■□□□□ 0.4
RFX1-201ENST00000254325 CRY2Q49AN0 593 aa17.58■□□□□ 0.4
RFX1-201ENST00000254325 TYW1BQ6NUM6 668 aa17.58■□□□□ 0.4
RFX1-201ENST00000254325 COL23A1Q86Y22 540 aaPredicted RBP17.58■□□□□ 0.4
RFX1-201ENST00000254325 ANKS1AQ92625 1134 aa17.58■□□□□ 0.4
RFX1-201ENST00000254325 ZMYND12Q9H0C1 365 aa17.58■□□□□ 0.4
RFX1-201ENST00000254325 KANSL2Q9H9L4 492 aa17.58■□□□□ 0.4
RFX1-201ENST00000254325 GUCA1BQ9UMX6 200 aa17.58■□□□□ 0.4
RFX1-201ENST00000254325 SOWAHDA6NJG2 315 aa17.58■□□□□ 0.4
RFX1-201ENST00000254325 RAD51AP2Q09MP3 1159 aa17.58■□□□□ 0.4
RFX1-201ENST00000254325 ABCB5Q2M3G0 1257 aa17.58■□□□□ 0.4
RFX1-201ENST00000254325 CDC42EP5Q6NZY7 148 aa17.58■□□□□ 0.4
RFX1-201ENST00000254325 SLF1Q9BQI6 1058 aa17.58■□□□□ 0.4
RFX1-201ENST00000254325 DHX36Q9H2U1 1008 aaKnown RBP17.58■□□□□ 0.4
RFX1-201ENST00000254325 CYLC1P35663 651 aaPredicted RBP17.57■□□□□ 0.4
RFX1-201ENST00000254325 TTBK2Q6IQ55 1244 aa17.57■□□□□ 0.4
RFX1-201ENST00000254325 CCDC70Q6NSX1 233 aa17.57■□□□□ 0.4
RFX1-201ENST00000254325 LARGE2Q8N3Y3 721 aa17.57■□□□□ 0.4
RFX1-201ENST00000254325 CCDC51Q96ER9 411 aa17.57■□□□□ 0.4
RFX1-201ENST00000254325 BAZ2AQ9UIF9 1905 aaKnown RBP17.57■□□□□ 0.4
RFX1-201ENST00000254325 USP17L10C9JJH3 530 aa17.57■□□□□ 0.4
RFX1-201ENST00000254325 MYL1P05976 194 aa17.57■□□□□ 0.4
RFX1-201ENST00000254325 ERCC6LQ2NKX8 1250 aa17.57■□□□□ 0.4
RFX1-201ENST00000254325 ZNF771Q7L3S4 317 aaPredicted RBP17.57■□□□□ 0.4
RFX1-201ENST00000254325 COL22A1Q8NFW1 1626 aaPredicted RBP17.57■□□□□ 0.4
RFX1-201ENST00000254325 ZYXQ15942 572 aaKnown RBP17.57■□□□□ 0.4
RFX1-201ENST00000254325 ENOX2Q16206 610 aaKnown RBP17.57■□□□□ 0.4
RFX1-201ENST00000254325 TCP11X2Q5H9J9 407 aa17.57■□□□□ 0.4
RFX1-201ENST00000254325 TBC1D7Q9P0N9 293 aa17.57■□□□□ 0.4
RFX1-201ENST00000254325 CTAGE9A4FU28 777 aa17.56■□□□□ 0.4
RFX1-201ENST00000254325 CLSTN1O94985 981 aa17.56■□□□□ 0.4
RFX1-201ENST00000254325 SRGNP10124 158 aa17.56■□□□□ 0.4
RFX1-201ENST00000254325 MCM6Q14566 821 aa17.56■□□□□ 0.4
RFX1-201ENST00000254325 TDRD12Q587J7 1177 aaKnown RBP17.56■□□□□ 0.4
RFX1-201ENST00000254325 NT5DC1Q5TFE4 455 aa17.56■□□□□ 0.4
RFX1-201ENST00000254325 ZNF772Q68DY9 489 aaPredicted RBP17.56■□□□□ 0.4
RFX1-201ENST00000254325 ADGRF4Q8IZF3 695 aa17.56■□□□□ 0.4
RFX1-201ENST00000254325 LARP4BQ92615 738 aaKnown RBP17.56■□□□□ 0.4
RFX1-201ENST00000254325 TCP10L2B9ZVM9 353 aa17.56■□□□□ 0.4
RFX1-201ENST00000254325 ECE2O60344 883 aa17.56■□□□□ 0.4
RFX1-201ENST00000254325 SUPT20HQ8NEM7 779 aa17.56■□□□□ 0.4
RFX1-201ENST00000254325 TRAF5O00463 557 aa17.56■□□□□ 0.4
RFX1-201ENST00000254325 GTF2F1P35269 517 aaKnown RBP eCLIP17.56■□□□□ 0.4
RFX1-201ENST00000254325 RHBDL3P58872 404 aa17.56■□□□□ 0.4
RFX1-201ENST00000254325 CCSER1Q9C0I3 900 aa17.56■□□□□ 0.4
RFX1-201ENST00000254325 A0A1B0GTH6 734 aa17.56■□□□□ 0.4
RFX1-201ENST00000254325 PPP1R3GB7ZBB8 358 aa17.56■□□□□ 0.4
RFX1-201ENST00000254325 TDP2O95551 362 aa17.56■□□□□ 0.4
RFX1-201ENST00000254325 TOGARAM2Q6ZUX3 1019 aa17.56■□□□□ 0.4
RFX1-201ENST00000254325 DAGLBQ8NCG7 672 aa17.56■□□□□ 0.4
RFX1-201ENST00000254325 DHTKD1Q96HY7 919 aaPredicted RBP17.56■□□□□ 0.4
RFX1-201ENST00000254325 POTEMA6NI47 508 aa17.55■□□□□ 0.4
RFX1-201ENST00000254325 PRPHP41219 470 aa17.55■□□□□ 0.4
RFX1-201ENST00000254325 CCDC65Q8IXS2 484 aa17.55■□□□□ 0.4
RFX1-201ENST00000254325 P2RX5Q93086 422 aa17.55■□□□□ 0.4
RFX1-201ENST00000254325 AKR1B10O60218 316 aa17.55■□□□□ 0.4
RFX1-201ENST00000254325 PPP2R3AQ06190 1150 aa17.55■□□□□ 0.4
RFX1-201ENST00000254325 NCBP1Q09161 790 aaKnown RBP17.55■□□□□ 0.4
RFX1-201ENST00000254325 GPS2Q13227 327 aa17.55■□□□□ 0.4
RFX1-201ENST00000254325 NR1I3Q14994 352 aa17.55■□□□□ 0.4
RFX1-201ENST00000254325 NCAPH2Q6IBW4 605 aa17.55■□□□□ 0.4
RFX1-201ENST00000254325 NYAP1Q6ZVC0 841 aa17.55■□□□□ 0.4
RFX1-201ENST00000254325 SPICE1Q8N0Z3 855 aa17.55■□□□□ 0.4
RFX1-201ENST00000254325 TNFRSF25Q93038 417 aa17.55■□□□□ 0.4
RFX1-201ENST00000254325 FAM163AQ96GL9 167 aaPredicted RBP17.55■□□□□ 0.4
RFX1-201ENST00000254325 CSRNP1Q96S65 589 aa17.55■□□□□ 0.4
RFX1-201ENST00000254325 PUF60Q9UHX1 559 aaKnown RBP17.55■□□□□ 0.4
RFX1-201ENST00000254325 ZNF543Q08ER8 600 aa17.55■□□□□ 0.4
RFX1-201ENST00000254325 OR8K1Q8NGG5 319 aa17.55■□□□□ 0.4
RFX1-201ENST00000254325 PANX2Q96RD6 677 aa17.55■□□□□ 0.4
RFX1-201ENST00000254325 TUBGCP2Q9BSJ2 902 aa17.55■□□□□ 0.4
RFX1-201ENST00000254325 TDRD3Q9H7E2 651 aaKnown RBP17.55■□□□□ 0.4
RFX1-201ENST00000254325 ARHGEF10LQ9HCE6 1279 aa17.55■□□□□ 0.4
RFX1-201ENST00000254325 CLRN2A0PK11 232 aa17.54■□□□□ 0.4
RFX1-201ENST00000254325 B4DLN1 442 aa17.54■□□□□ 0.4
RFX1-201ENST00000254325 ZBTB5O15062 677 aa17.54■□□□□ 0.4
RFX1-201ENST00000254325 CHRNA5P30532 468 aa17.54■□□□□ 0.4
RFX1-201ENST00000254325 DNM2P50570 870 aa17.54■□□□□ 0.4
RFX1-201ENST00000254325 DLGAP5Q15398 846 aa17.54■□□□□ 0.4
RFX1-201ENST00000254325 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.54■□□□□ 0.4
RFX1-201ENST00000254325 TAF1P21675 1872 aa17.54■□□□□ 0.4
RFX1-201ENST00000254325 EEF2P13639 858 aaKnown RBP17.54■□□□□ 0.4
RFX1-201ENST00000254325 EEF1GP26641 437 aaKnown RBP17.54■□□□□ 0.4
RFX1-201ENST00000254325 SEPT2Q15019 361 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms