RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 LRRC14Q15048 493 aa8.24□□□□□ -1.09
RIF1-201ENST00000243326 SPATA5Q8NB90 893 aa8.24□□□□□ -1.09
RIF1-201ENST00000243326 FNBP1Q96RU3 617 aa8.24□□□□□ -1.09
RIF1-201ENST00000243326 SUGCTQ9HAC7 445 aa8.24□□□□□ -1.09
RIF1-201ENST00000243326 TACC3Q9Y6A5 838 aa8.24□□□□□ -1.09
RIF1-201ENST00000243326 NONOQ15233 471 aaKnown RBP eCLIP8.24□□□□□ -1.09
RIF1-201ENST00000243326 SESTD1Q86VW0 696 aa8.24□□□□□ -1.09
RIF1-201ENST00000243326 RABGGTAQ92696 567 aa8.24□□□□□ -1.09
RIF1-201ENST00000243326 GPR101Q96P66 508 aaPredicted RBP8.24□□□□□ -1.09
RIF1-201ENST00000243326 VCX3BQ9H321 246 aa8.24□□□□□ -1.09
RIF1-201ENST00000243326 ABCC4O15439 1325 aa8.24□□□□□ -1.09
RIF1-201ENST00000243326 APBA1Q02410 837 aa8.24□□□□□ -1.09
RIF1-201ENST00000243326 PPARAQ07869 468 aa8.24□□□□□ -1.09
RIF1-201ENST00000243326 PCDHB6Q9Y5E3 794 aa8.24□□□□□ -1.09
RIF1-201ENST00000243326 ENO4A6NNW6 628 aa8.24□□□□□ -1.09
RIF1-201ENST00000243326 USP17L12C9JPN9 530 aa8.24□□□□□ -1.09
RIF1-201ENST00000243326 USP17L21D6R901 530 aa8.24□□□□□ -1.09
RIF1-201ENST00000243326 GCKRQ14397 625 aa8.24□□□□□ -1.09
RIF1-201ENST00000243326 TMEM259Q4ZIN3 620 aa8.24□□□□□ -1.09
RIF1-201ENST00000243326 TRAPPC8Q9Y2L5 1435 aa8.24□□□□□ -1.09
RIF1-201ENST00000243326 BEND6Q5SZJ8 279 aaPredicted RBP8.24□□□□□ -1.09
RIF1-201ENST00000243326 ANKRD20A3Q5VUR7 823 aa8.24□□□□□ -1.09
RIF1-201ENST00000243326 DHX40Q8IX18 779 aaKnown RBP8.24□□□□□ -1.09
RIF1-201ENST00000243326 ZNF710Q8N1W2 664 aa8.24□□□□□ -1.09
RIF1-201ENST00000243326 MAML1Q92585 1016 aa8.24□□□□□ -1.09
RIF1-201ENST00000243326 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.24□□□□□ -1.09
RIF1-201ENST00000243326 N4BP1O75113 896 aaKnown RBP8.24□□□□□ -1.09
RIF1-201ENST00000243326 DLATP10515 647 aaKnown RBP8.24□□□□□ -1.09
RIF1-201ENST00000243326 RSAD2Q8WXG1 361 aa8.24□□□□□ -1.09
RIF1-201ENST00000243326 PSDA5PKW4 1024 aaPredicted RBP8.24□□□□□ -1.09
RIF1-201ENST00000243326 GOLGA8SH3BPF8 625 aa8.24□□□□□ -1.09
RIF1-201ENST00000243326 GOLGA8MH3BSY2 632 aa8.24□□□□□ -1.09
RIF1-201ENST00000243326 YWHAGP61981 247 aaKnown RBP eCLIP8.24□□□□□ -1.09
RIF1-201ENST00000243326 CARMIL3Q8ND23 1372 aa8.24□□□□□ -1.09
RIF1-201ENST00000243326 KITP10721 976 aa8.24□□□□□ -1.09
RIF1-201ENST00000243326 ADAM21Q9UKJ8 722 aa8.24□□□□□ -1.09
RIF1-201ENST00000243326 GDAQ9Y2T3 454 aa8.24□□□□□ -1.09
RIF1-201ENST00000243326 A0A087WUV0 522 aaPredicted RBP8.24□□□□□ -1.09
RIF1-201ENST00000243326 KLHL14Q9P2G3 628 aa8.24□□□□□ -1.09
RIF1-201ENST00000243326 TSR3Q9UJK0 312 aaKnown RBP8.24□□□□□ -1.09
RIF1-201ENST00000243326 AFG3L2Q9Y4W6 797 aa8.24□□□□□ -1.09
RIF1-201ENST00000243326 PHLPP2Q6ZVD8 1323 aa8.24□□□□□ -1.09
RIF1-201ENST00000243326 ANKRD12Q6UB98 2062 aa8.23□□□□□ -1.09
RIF1-201ENST00000243326 MCTP2Q6DN12 878 aa8.23□□□□□ -1.09
RIF1-201ENST00000243326 HAUS2Q9NVX0 235 aa8.23□□□□□ -1.09
RIF1-201ENST00000243326 KDM5AP29375 1690 aaKnown RBP8.23□□□□□ -1.09
RIF1-201ENST00000243326 SPAG7O75391 227 aa8.23□□□□□ -1.09
RIF1-201ENST00000243326 CDC25BP30305 580 aa8.23□□□□□ -1.09
RIF1-201ENST00000243326 EIF4A3P38919 411 aaKnown RBP8.23□□□□□ -1.09
RIF1-201ENST00000243326 GNAQP50148 359 aa8.23□□□□□ -1.09
RIF1-201ENST00000243326 KCNQ4P56696 695 aa8.23□□□□□ -1.09
RIF1-201ENST00000243326 NFRKBQ6P4R8 1299 aa8.23□□□□□ -1.09
RIF1-201ENST00000243326 ZNF804AQ7Z570 1209 aa8.23□□□□□ -1.09
RIF1-201ENST00000243326 GJA10Q969M2 543 aa8.23□□□□□ -1.09
RIF1-201ENST00000243326 IFT140Q96RY7 1462 aa8.23□□□□□ -1.09
RIF1-201ENST00000243326 ATP5DP30049 168 aa8.23□□□□□ -1.09
RIF1-201ENST00000243326 ZNF496Q96IT1 587 aaPredicted RBP8.23□□□□□ -1.09
RIF1-201ENST00000243326 FANCAO15360 1455 aa8.23□□□□□ -1.09
RIF1-201ENST00000243326 TNNI1P19237 187 aa8.23□□□□□ -1.09
RIF1-201ENST00000243326 ICE2Q659A1 982 aa8.23□□□□□ -1.09
RIF1-201ENST00000243326 SPATS2LQ9NUQ6 558 aaKnown RBP8.23□□□□□ -1.09
RIF1-201ENST00000243326 PLAAQ9Y263 795 aa8.23□□□□□ -1.09
RIF1-201ENST00000243326 CUL4BQ13620 913 aa8.23□□□□□ -1.09
RIF1-201ENST00000243326 UFL1O94874 794 aa8.23□□□□□ -1.09
RIF1-201ENST00000243326 SPATA1Q5VX52 437 aa8.23□□□□□ -1.09
RIF1-201ENST00000243326 FBXO18Q8NFZ0 1043 aa8.23□□□□□ -1.09
RIF1-201ENST00000243326 GUCY1A3Q02108 690 aa8.23□□□□□ -1.09
RIF1-201ENST00000243326 ARMCX5Q6P1M9 558 aa8.23□□□□□ -1.09
RIF1-201ENST00000243326 HAUS7Q99871 368 aa8.23□□□□□ -1.09
RIF1-201ENST00000243326 FNDC3AQ9Y2H6 1198 aaKnown RBP8.23□□□□□ -1.09
RIF1-201ENST00000243326 CEP70Q8NHQ1 597 aa8.23□□□□□ -1.09
RIF1-201ENST00000243326 LRRC8CQ8TDW0 803 aa8.23□□□□□ -1.09
RIF1-201ENST00000243326 PLCH2O75038 1416 aa8.23□□□□□ -1.09
RIF1-201ENST00000243326 TEX33O43247 280 aa8.23□□□□□ -1.09
RIF1-201ENST00000243326 CMA1P23946 247 aa8.23□□□□□ -1.09
RIF1-201ENST00000243326 GNA11P29992 359 aa8.23□□□□□ -1.09
RIF1-201ENST00000243326 MSH2P43246 934 aa8.23□□□□□ -1.09
RIF1-201ENST00000243326 PRR16Q569H4 304 aa8.23□□□□□ -1.09
RIF1-201ENST00000243326 VSTM4Q8IW00 320 aa8.23□□□□□ -1.09
RIF1-201ENST00000243326 DNAJC10Q8IXB1 793 aa8.23□□□□□ -1.09
RIF1-201ENST00000243326 WDR24Q96S15 920 aa8.23□□□□□ -1.09
RIF1-201ENST00000243326 SOX11P35716 441 aa8.23□□□□□ -1.09
RIF1-201ENST00000243326 TSPY1Q01534 308 aa8.23□□□□□ -1.09
RIF1-201ENST00000243326 VWA3BQ502W6 1294 aa8.23□□□□□ -1.09
RIF1-201ENST00000243326 ZNF790Q6PG37 636 aa8.23□□□□□ -1.09
RIF1-201ENST00000243326 BIVM-ERCC5R4GMW8 1640 aa8.23□□□□□ -1.09
RIF1-201ENST00000243326 PDE6AP16499 860 aa8.23□□□□□ -1.09
RIF1-201ENST00000243326 ATL3Q6DD88 541 aa8.23□□□□□ -1.09
RIF1-201ENST00000243326 SLF2Q8IX21 1173 aa8.23□□□□□ -1.09
RIF1-201ENST00000243326 SUDS3Q9H7L9 328 aaPredicted RBP8.23□□□□□ -1.09
RIF1-201ENST00000243326 TROVE2P10155 538 aaKnown RBP eCLIP8.22□□□□□ -1.09
RIF1-201ENST00000243326 ATF2P15336 505 aa8.22□□□□□ -1.09
RIF1-201ENST00000243326 IGBP1P78318 339 aa8.22□□□□□ -1.09
RIF1-201ENST00000243326 HPS3Q969F9 1004 aa8.22□□□□□ -1.09
RIF1-201ENST00000243326 NUP58Q9BVL2 599 aa8.22□□□□□ -1.09
RIF1-201ENST00000243326 ABCF3Q9NUQ8 709 aa8.22□□□□□ -1.09
RIF1-201ENST00000243326 EEF1GP26641 437 aaKnown RBP8.22□□□□□ -1.09
RIF1-201ENST00000243326 ATXN3P54252 364 aaPredicted RBP8.22□□□□□ -1.09
RIF1-201ENST00000243326 KIFAP3Q92845 792 aa8.22□□□□□ -1.09
RIF1-201ENST00000243326 LIN9Q5TKA1 542 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms