RNA–Protein interactions for RNA: ENSMUST00000211788.1

Ptpre-208, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

TSL 1 (best) BASIC

Gene Ptpre, Length 2,331 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-208ENSMUST00000211788 Madcam1Q61826 405 aa11.75□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Brsk2Q69Z98 735 aa11.75□□□□□ -0.53
Ptpre-208ENSMUST00000211788 BlmhQ8R016 455 aa11.75□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Gnl2Q99LH1 728 aaKnown RBP11.75□□□□□ -0.53
Ptpre-208ENSMUST00000211788 AvenQ9D9K3 342 aa11.75□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Togaram1Q6A070 1776 aaKnown RBP11.74□□□□□ -0.53
Ptpre-208ENSMUST00000211788 CluhQ5SW19 1315 aa11.74□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Tmem132bF7BAB2 1078 aa11.74□□□□□ -0.53
Ptpre-208ENSMUST00000211788 MthfslL7N466 203 aa11.74□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Diaph1O08808 1255 aa11.74□□□□□ -0.53
Ptpre-208ENSMUST00000211788 EmbP21995 330 aa11.74□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Nf2P46662 596 aa11.74□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Eef2P58252 858 aaKnown RBP11.74□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Cdr2P97817 455 aa11.74□□□□□ -0.53
Ptpre-208ENSMUST00000211788 L1td1Q587J6 782 aaKnown RBP11.74□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Camsap3Q80VC9 1252 aa11.74□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Vipas39Q8BGQ1 491 aa11.74□□□□□ -0.53
Ptpre-208ENSMUST00000211788 LRWD1Q8BUI3 648 aaKnown RBP11.74□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Q8C1R3 189 aa11.74□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Mtmr6Q8VE11 617 aa11.74□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Xrcc4Q924T3 326 aa11.74□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Arpp21Q9DCB4 807 aa11.74□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Scn9aQ62205 1984 aa11.74□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Pabpc1lA2A5N3 607 aaKnown RBP11.74□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Ces1aE9PYP1 563 aa11.74□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Slc39a2G3X943 309 aa11.74□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Mboat4P0C7A3 435 aa11.74□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Aco1P28271 889 aaKnown RBP11.74□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Adssl1P28650 457 aa11.74□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Ankrd40Q5SUE8 363 aa11.74□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Arhgef2Q60875 985 aa11.74□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Utp14bQ6EJB6 756 aaKnown RBP11.74□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Fnbp4Q6ZQ03 1031 aa11.74□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Anks1bQ8BIZ1 1259 aa11.74□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Rasgrp4Q8BTM9 673 aa11.74□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Lrrc42Q8R2U7 421 aa11.74□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Pspc1Q8R326 523 aaKnown RBP11.74□□□□□ -0.53
Ptpre-208ENSMUST00000211788 TxlnbQ8VBT1 685 aa11.74□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Lzts2Q91YU6 671 aa11.74□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Prc1Q99K43 603 aaKnown RBP11.74□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Cyp2ab1S4R196 498 aa11.74□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Nup188Q6ZQH8 1759 aa11.73□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Grik3B1AS29 919 aa11.73□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Usp17lbE9Q9U0 468 aa11.73□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Tdo2P48776 406 aa11.73□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Kifap3P70188 793 aa11.73□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Psmd1Q3TXS7 953 aa11.73□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Clul1Q3ZRW6 464 aa11.73□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Ift88Q61371 824 aa11.73□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Tm4sf1Q64302 202 aa11.73□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Ncoa7Q6DFV7 943 aa11.73□□□□□ -0.53
Ptpre-208ENSMUST00000211788 PrimpolQ6P1E7 537 aa11.73□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Cfap100Q80VN0 613 aa11.73□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Dlg1Q811D0 905 aaKnown RBP11.73□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Q8C6G1 249 aa11.73□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Gtpbp10Q8K013 366 aa11.73□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Taf6lQ8R2K4 616 aa11.73□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Klrc1Q9Z202 244 aa11.73□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Mtmr2Q9Z2D1 643 aa11.73□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Ecm29Q6PDI5 1840 aa11.73□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Col4a5Q63ZW6 1691 aa11.73□□□□□ -0.53
Ptpre-208ENSMUST00000211788 1700003F12RikA2AKE5 210 aa11.72□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Adam7O35227 789 aa11.72□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Slc8a1P70414 970 aa11.72□□□□□ -0.53
Ptpre-208ENSMUST00000211788 MyrflQ3UN70 904 aa11.72□□□□□ -0.53
Ptpre-208ENSMUST00000211788 PRAG1Q571I4 1179 aa11.72□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Map3k12Q60700 888 aa11.72□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Dpf2Q61103 391 aaKnown RBP11.72□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Grm4Q68EF4 912 aa11.72□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Zbtb39Q6PDK0 712 aa11.72□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Dpp8Q80YA7 892 aa11.72□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Skor1Q8BX46 964 aa11.72□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Iws1Q8C1D8 766 aa11.72□□□□□ -0.53
Ptpre-208ENSMUST00000211788 WdpcpQ8C456 722 aa11.72□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Osbpl1aQ91XL9 950 aa11.72□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Mtfr1lQ9CWE0 289 aa11.72□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Znf287Q9EQB9 759 aa11.72□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Cul4bA2A432 970 aaKnown RBP11.72□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Serpina16D3Z660 418 aa11.72□□□□□ -0.53
Ptpre-208ENSMUST00000211788 UncxO08934 530 aa11.72□□□□□ -0.53
Ptpre-208ENSMUST00000211788 LdhaP06151 332 aaKnown RBP11.72□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Rhpn1Q61085 643 aa11.72□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Glra4Q61603 456 aa11.72□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Sval3Q76I99 144 aa11.72□□□□□ -0.53
Ptpre-208ENSMUST00000211788 GypcQ78HU7 95 aa11.72□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Trmt2aQ8BNV1 574 aaKnown RBP11.72□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Erich5Q8K0S2 362 aa11.72□□□□□ -0.53
Ptpre-208ENSMUST00000211788 WaslQ91YD9 501 aa11.72□□□□□ -0.53
Ptpre-208ENSMUST00000211788 4930550L24RikQ99PA7 320 aa11.72□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Sugt1Q9CX34 336 aa11.72□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Thap2Q9D305 217 aa11.72□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Mtcl1Q3UHU5 1945 aa11.72□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Zfp853A0A1D5RM95 733 aa11.71□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Lilrb3P97484 841 aa11.71□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Specc1lQ2KN98 1118 aaKnown RBP11.71□□□□□ -0.53
Ptpre-208ENSMUST00000211788 CtcfQ61164 736 aaKnown RBP11.71□□□□□ -0.53
Ptpre-208ENSMUST00000211788 RragbQ6NTA4 374 aa11.71□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Rab3il1Q8VDV3 383 aa11.71□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Mtmr4Q91XS1 1190 aa11.71□□□□□ -0.53
Ptpre-208ENSMUST00000211788 Msantd4Q91YU3 345 aa11.71□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 14.2 ms