RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Aldh5a1Q8BWF0 523 aa9.74□□□□□ -0.85
Col28a1-201ENSMUST00000115537 SowahdQ8BY98 327 aa9.74□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Arhgap18Q8K0Q5 663 aa9.74□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Usp15Q8R5H1 981 aa9.74□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Mfap3Q922T2 349 aa9.74□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Dbndd2Q9CRD4 158 aa9.74□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Col20a1Q923P0 1320 aa9.74□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Gm20425E9Q035 978 aaKnown RBP9.74□□□□□ -0.85
Col28a1-201ENSMUST00000115537 SrprbP47758 269 aa9.74□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Dab2P98078 766 aa9.74□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Naa35Q6PHQ8 725 aa9.74□□□□□ -0.85
Col28a1-201ENSMUST00000115537 March6Q6ZQ89 909 aa9.74□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Spata2Q8K004 515 aa9.74□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Pold4Q9CWP8 107 aa9.74□□□□□ -0.85
Col28a1-201ENSMUST00000115537 FliiQ9JJ28 1271 aa9.74□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Peg12Q9WVA7 283 aa9.74□□□□□ -0.85
Col28a1-201ENSMUST00000115537 NktrP30415 1453 aa9.74□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Myom1Q62234 1667 aaKnown RBP9.74□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Rgs9O54828 675 aa9.74□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Tmem232Q5K6N0 675 aa9.74□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Pcdhb14Q6PB90 796 aa9.74□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Maip1Q8BHE8 291 aa9.74□□□□□ -0.85
Col28a1-201ENSMUST00000115537 HhatQ8BMT9 499 aa9.74□□□□□ -0.85
Col28a1-201ENSMUST00000115537 HlfQ8BW74 295 aa9.74□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Gramd4Q8CB44 633 aa9.74□□□□□ -0.85
Col28a1-201ENSMUST00000115537 9230110C19RikQ8CC70 267 aa9.74□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Lztr1Q9CQ33 837 aa9.74□□□□□ -0.85
Col28a1-201ENSMUST00000115537 1700109H08RikQ9D9C0 210 aa9.74□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Ccne2Q9Z238 404 aa9.74□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Ifi207E9Q3L4 978 aa9.73□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Lmnb1P14733 588 aaKnown RBP9.73□□□□□ -0.85
Col28a1-201ENSMUST00000115537 NyxP83503 476 aa9.73□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Tldc1Q8K0P3 455 aa9.73□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Ccdc105Q9D4K7 499 aa9.73□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Pus3Q9JI38 481 aa9.73□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Rabgef1Q9JM13 491 aa9.73□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Clrn2B2RVW2 232 aa9.73□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Ighmbp2P40694 993 aa9.73□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Pth1rP41593 591 aa9.73□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Chd2E9PZM4 1827 aaKnown RBP9.73□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Foxn2E9Q7L6 429 aa9.73□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Trove2O08848 538 aa9.73□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Ncf2O70145 525 aa9.73□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Snx12O70493 165 aa9.73□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Pak1O88643 545 aa9.73□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Gjc1P28229 396 aa9.73□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Sept1P42209 366 aa9.73□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Hspd1P63038 573 aaKnown RBP9.73□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Ano9P86044 747 aa9.73□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Q3UJP5 209 aa9.73□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Fhdc1Q3ULZ2 1149 aa9.73□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Pabpc4Q6PHQ9 660 aaKnown RBP9.73□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Sept9Q80UG5 583 aa9.73□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Gpr150Q8BL07 427 aa9.73□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Dclk3Q8BWQ5 790 aa9.73□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Spata4Q8K3V1 295 aa9.73□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Orc1Q9Z1N2 840 aaKnown RBP9.73□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Pnpla7A2AJ88 1352 aa9.72□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Flt4P35917 1363 aa9.72□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Prr16A3KMN5 304 aa9.72□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Rexo5D3YW29 759 aa9.72□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Tmem165P52875 323 aa9.72□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Rad23bP54728 416 aa9.72□□□□□ -0.85
Col28a1-201ENSMUST00000115537 AsnsQ61024 561 aa9.72□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Asnsd1Q8BFS9 627 aa9.72□□□□□ -0.85
Col28a1-201ENSMUST00000115537 PaoxQ8C0L6 504 aa9.72□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Slf1Q8R3P9 1054 aa9.72□□□□□ -0.85
Col28a1-201ENSMUST00000115537 FktnQ8R507 461 aa9.72□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Pex19Q8VCI5 299 aa9.72□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Smc6Q924W5 1097 aa9.72□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Copb1Q9JIF7 953 aa9.72□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Tcp1P11983 556 aaKnown RBP9.72□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Dynll1P63168 89 aa9.72□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Sval3Q76I99 144 aa9.72□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Stk38lQ7TSE6 464 aa9.72□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Gpcpd1Q8C0L9 675 aa9.72□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Cul5Q9D5V5 780 aa9.72□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Gbp2Q9Z0E6 589 aa9.72□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Prss51A0A286YDY8 319 aa9.72□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Apol8A2VDH7 339 aaKnown RBP9.72□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Copb2O55029 905 aa9.72□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Lrrc4bP0C192 709 aa9.72□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Ctnna1P26231 906 aaKnown RBP9.72□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Dnm2P39054 870 aaKnown RBP9.72□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Gfpt1P47856 697 aa9.72□□□□□ -0.85
Col28a1-201ENSMUST00000115537 ClgnP52194 611 aa9.72□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Ddr1Q03146 911 aa9.72□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Arhgap44Q5SSM3 814 aa9.72□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Tbx2Q60707 711 aa9.72□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Rbm12b2Q66JV4 834 aaKnown RBP9.72□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Cdan1Q8CC12 1239 aa9.72□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Col23a1Q8K4G2 532 aa9.72□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Slc18a1Q8R090 521 aa9.72□□□□□ -0.85
Col28a1-201ENSMUST00000115537 HdlbpQ8VDJ3 1268 aaKnown RBP9.72□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Pcdha12Q91Y18 950 aa9.72□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Dhx58Q99J87 678 aa9.72□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Mroh6V9GX81 722 aa9.72□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Carmil3Q3UFQ8 1375 aa9.72□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Fam186bD3Z420 943 aa9.71□□□□□ -0.85
Col28a1-201ENSMUST00000115537 E9QMW4 1145 aa9.71□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms