RNA–Protein interactions for RNA: ENSMUST00000093061.6

Trim11-201, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim11, Length 2,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-201ENSMUST00000093061 Apol10aQ8CCA5 318 aa17.45■□□□□ 0.38
Trim11-201ENSMUST00000093061 Col23a1Q8K4G2 532 aa17.45■□□□□ 0.38
Trim11-201ENSMUST00000093061 Onecut3Q8K557 490 aa17.45■□□□□ 0.38
Trim11-201ENSMUST00000093061 GlyctkQ8QZY2 523 aa17.45■□□□□ 0.38
Trim11-201ENSMUST00000093061 Styxl1Q9DAR2 321 aa17.45■□□□□ 0.38
Trim11-201ENSMUST00000093061 AaasP58742 546 aa17.44■□□□□ 0.38
Trim11-201ENSMUST00000093061 Rtel1Q0VGM9 1203 aa17.44■□□□□ 0.38
Trim11-201ENSMUST00000093061 Large2Q5XPT3 690 aa17.44■□□□□ 0.38
Trim11-201ENSMUST00000093061 Adam6bQ6IMH7 756 aa17.44■□□□□ 0.38
Trim11-201ENSMUST00000093061 Ddx31Q6NZQ2 687 aaKnown RBP17.44■□□□□ 0.38
Trim11-201ENSMUST00000093061 LarsQ8BMJ2 1178 aa17.44■□□□□ 0.38
Trim11-201ENSMUST00000093061 Rasal3Q8C2K5 1041 aa17.44■□□□□ 0.38
Trim11-201ENSMUST00000093061 Cd274Q9EP73 290 aa17.44■□□□□ 0.38
Trim11-201ENSMUST00000093061 Pitpnm2Q6ZPQ6 1335 aa17.44■□□□□ 0.38
Trim11-201ENSMUST00000093061 Scgb2b18A0A087WPA9 112 aa17.44■□□□□ 0.38
Trim11-201ENSMUST00000093061 Stim1P70302 685 aa17.44■□□□□ 0.38
Trim11-201ENSMUST00000093061 Spata18Q0P557 537 aa17.44■□□□□ 0.38
Trim11-201ENSMUST00000093061 Ncoa7Q6DFV7 943 aa17.44■□□□□ 0.38
Trim11-201ENSMUST00000093061 Tango6Q8C3S2 1079 aa17.44■□□□□ 0.38
Trim11-201ENSMUST00000093061 Cd209bQ8CJ91 325 aa17.44■□□□□ 0.38
Trim11-201ENSMUST00000093061 Plekhg6Q8R0J1 787 aa17.44■□□□□ 0.38
Trim11-201ENSMUST00000093061 Ushbp1Q8R370 680 aa17.44■□□□□ 0.38
Trim11-201ENSMUST00000093061 Txndc5Q91W90 417 aa17.44■□□□□ 0.38
Trim11-201ENSMUST00000093061 Mss51Q9D5Z5 446 aa17.44■□□□□ 0.38
Trim11-201ENSMUST00000093061 EcsitQ9QZH6 435 aa17.44■□□□□ 0.38
Trim11-201ENSMUST00000093061 Myh14Q6URW6 2000 aa17.43■□□□□ 0.38
Trim11-201ENSMUST00000093061 Ttbk2Q3UVR3 1243 aa17.43■□□□□ 0.38
Trim11-201ENSMUST00000093061 Kctd1Q5M956 257 aa17.43■□□□□ 0.38
Trim11-201ENSMUST00000093061 Rasa3Q60790 834 aa17.43■□□□□ 0.38
Trim11-201ENSMUST00000093061 Lamc2Q61092 1191 aa17.43■□□□□ 0.38
Trim11-201ENSMUST00000093061 Trim25Q61510 634 aaKnown RBP17.43■□□□□ 0.38
Trim11-201ENSMUST00000093061 Smarca1Q6PGB8 1046 aa17.43■□□□□ 0.38
Trim11-201ENSMUST00000093061 Tmc4Q7TQ65 694 aa17.43■□□□□ 0.38
Trim11-201ENSMUST00000093061 Krtap5-3Q9D226 196 aa17.43■□□□□ 0.38
Trim11-201ENSMUST00000093061 Pkd2l2Q9JLG4 621 aa17.43■□□□□ 0.38
Trim11-201ENSMUST00000093061 Mrvi1Q9WUX5 899 aaKnown RBP17.43■□□□□ 0.38
Trim11-201ENSMUST00000093061 Lbhd1A0A087WPA0 259 aa17.42■□□□□ 0.38
Trim11-201ENSMUST00000093061 Mx1P09922 631 aa17.42■□□□□ 0.38
Trim11-201ENSMUST00000093061 Msh3P13705 1091 aa17.42■□□□□ 0.38
Trim11-201ENSMUST00000093061 Gng11P61953 73 aa17.42■□□□□ 0.38
Trim11-201ENSMUST00000093061 Oxr1Q4KMM3 866 aa17.42■□□□□ 0.38
Trim11-201ENSMUST00000093061 Hspa4Q61316 841 aa17.42■□□□□ 0.38
Trim11-201ENSMUST00000093061 Ovgp1Q62010 721 aa17.42■□□□□ 0.38
Trim11-201ENSMUST00000093061 Nek9Q8K1R7 984 aa17.42■□□□□ 0.38
Trim11-201ENSMUST00000093061 Eme2Q56A04 373 aa17.42■□□□□ 0.38
Trim11-201ENSMUST00000093061 WaplQ65Z40 1200 aaKnown RBP17.42■□□□□ 0.38
Trim11-201ENSMUST00000093061 Necab1Q8BG18 352 aa17.42■□□□□ 0.38
Trim11-201ENSMUST00000093061 Tesk2Q8VCT9 570 aa17.42■□□□□ 0.38
Trim11-201ENSMUST00000093061 Tmem191cQ9JJB1 302 aa17.42■□□□□ 0.38
Trim11-201ENSMUST00000093061 Vstm4T1NXB5 319 aa17.42■□□□□ 0.38
Trim11-201ENSMUST00000093061 Bpifb4A2BGH0 617 aa17.41■□□□□ 0.38
Trim11-201ENSMUST00000093061 Rsrc2A2RTL5 376 aaKnown RBP17.41■□□□□ 0.38
Trim11-201ENSMUST00000093061 Ccdc34Q3UI66 367 aa17.41■□□□□ 0.38
Trim11-201ENSMUST00000093061 Lrrcc1Q69ZB0 1026 aa17.41■□□□□ 0.38
Trim11-201ENSMUST00000093061 Iqcb1Q8BP00 598 aa17.41■□□□□ 0.38
Trim11-201ENSMUST00000093061 Setdb2Q8C267 713 aa17.41■□□□□ 0.38
Trim11-201ENSMUST00000093061 Efhd1Q9D4J1 240 aa17.41■□□□□ 0.38
Trim11-201ENSMUST00000093061 Copb2O55029 905 aa17.41■□□□□ 0.38
Trim11-201ENSMUST00000093061 PpardP35396 440 aa17.41■□□□□ 0.38
Trim11-201ENSMUST00000093061 Kcnj11Q61743 390 aa17.41■□□□□ 0.38
Trim11-201ENSMUST00000093061 Gpr101Q80T62 511 aa17.41■□□□□ 0.38
Trim11-201ENSMUST00000093061 Gpcpd1Q8C0L9 675 aa17.41■□□□□ 0.38
Trim11-201ENSMUST00000093061 Atxn7Q8R4I1 867 aa17.41■□□□□ 0.38
Trim11-201ENSMUST00000093061 Ppp1r3gQ9CW07 347 aa17.41■□□□□ 0.38
Trim11-201ENSMUST00000093061 Mfap3lQ9D3X9 409 aa17.41■□□□□ 0.38
Trim11-201ENSMUST00000093061 Copb1Q9JIF7 953 aa17.41■□□□□ 0.38
Trim11-201ENSMUST00000093061 Atp1a4Q9WV27 1032 aa17.41■□□□□ 0.38
Trim11-201ENSMUST00000093061 Nme9A0A1L1SUL6 329 aa17.4■□□□□ 0.38
Trim11-201ENSMUST00000093061 Csf1rP09581 977 aa17.4■□□□□ 0.38
Trim11-201ENSMUST00000093061 NefhP19246 1090 aa17.4■□□□□ 0.38
Trim11-201ENSMUST00000093061 Gucy2cQ3UWA6 1072 aa17.4■□□□□ 0.38
Trim11-201ENSMUST00000093061 CtcfQ61164 736 aaKnown RBP17.4■□□□□ 0.38
Trim11-201ENSMUST00000093061 Prdm4Q80V63 803 aa17.4■□□□□ 0.38
Trim11-201ENSMUST00000093061 Ano2Q8CFW1 1002 aa17.4■□□□□ 0.38
Trim11-201ENSMUST00000093061 Uso1Q9Z1Z0 959 aaKnown RBP17.4■□□□□ 0.38
Trim11-201ENSMUST00000093061 GsdmeQ9Z2D3 512 aa17.4■□□□□ 0.38
Trim11-201ENSMUST00000093061 Col2a1P28481 1487 aa17.4■□□□□ 0.38
Trim11-201ENSMUST00000093061 Gm4307E9PZY4 289 aa17.4■□□□□ 0.38
Trim11-201ENSMUST00000093061 Gm4312K9J7E2 289 aa17.4■□□□□ 0.38
Trim11-201ENSMUST00000093061 Insm1Q63ZV0 521 aa17.4■□□□□ 0.38
Trim11-201ENSMUST00000093061 Krt87Q6IMF0 495 aa17.4■□□□□ 0.38
Trim11-201ENSMUST00000093061 Ccdc189Q6NZQ0 333 aa17.4■□□□□ 0.38
Trim11-201ENSMUST00000093061 Smc1aQ9CU62 1233 aaKnown RBP17.4■□□□□ 0.38
Trim11-201ENSMUST00000093061 Syce1Q9D495 329 aa17.4■□□□□ 0.38
Trim11-201ENSMUST00000093061 MicalclQ9D5U9 680 aa17.4■□□□□ 0.38
Trim11-201ENSMUST00000093061 Fxr2Q9WVR4 673 aaKnown RBP17.4■□□□□ 0.38
Trim11-201ENSMUST00000093061 Rsbn1lD3Z0K6 821 aa17.39■□□□□ 0.37
Trim11-201ENSMUST00000093061 Kif23E9Q5G3 953 aa17.39■□□□□ 0.37
Trim11-201ENSMUST00000093061 Camsap3Q80VC9 1252 aa17.39■□□□□ 0.37
Trim11-201ENSMUST00000093061 Trim9Q8C7M3 817 aa17.39■□□□□ 0.37
Trim11-201ENSMUST00000093061 Arhgef6Q8K4I3 771 aa17.39■□□□□ 0.37
Trim11-201ENSMUST00000093061 BaatQ91X34 420 aa17.39■□□□□ 0.37
Trim11-201ENSMUST00000093061 Cul5Q9D5V5 780 aa17.39■□□□□ 0.37
Trim11-201ENSMUST00000093061 Krt34Q9D646 392 aa17.39■□□□□ 0.37
Trim11-201ENSMUST00000093061 SmapQ9R0P4 181 aaKnown RBP17.39■□□□□ 0.37
Trim11-201ENSMUST00000093061 Slc26a4Q9R155 780 aa17.39■□□□□ 0.37
Trim11-201ENSMUST00000093061 Map7d1A2AJI0 846 aa17.38■□□□□ 0.37
Trim11-201ENSMUST00000093061 Lrrc32G3XA59 663 aa17.38■□□□□ 0.37
Trim11-201ENSMUST00000093061 Mybl2P48972 704 aa17.38■□□□□ 0.37
Trim11-201ENSMUST00000093061 Prom2Q3UUY6 835 aa17.38■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 54.4 ms