RNA–Protein interactions for RNA: ENSMUST00000030586.14

Ccdc28b-201, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28b, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-201ENSMUST00000030586 Kif1bpQ6ZPU9 617 aa13.16□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Tbc1d10bQ8BHL3 798 aa13.16□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Dcaf8Q8N7N5 591 aa13.16□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Pqbp1Q91VJ5 263 aaKnown RBP13.16□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Usp26Q99MX1 835 aa13.16□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 NkapQ9D0F4 415 aaKnown RBP13.16□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Znf687Q9D2D7 1237 aa13.16□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Xrn2Q9DBR1 951 aaKnown RBP13.16□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Tmem191cQ9JJB1 302 aa13.16□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 SktA2AQ25 1946 aaKnown RBP13.15□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Oip5A2AQ14 241 aa13.15□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Gcnt4E9Q649 455 aa13.15□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Anp32aO35381 247 aa13.15□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Fzd1O70421 642 aa13.15□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Muc1Q02496 630 aa13.15□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Brd9Q3UQU0 596 aaKnown RBP13.15□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 PRAG1Q571I4 1179 aa13.15□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Ccdc85aQ5SP85 500 aa13.15□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Utp18Q5SSI6 552 aaKnown RBP13.15□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 MycbpapQ5SUV2 932 aa13.15□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Prmt6Q6NZB1 378 aa13.15□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Fsd1Q7TPM6 496 aa13.15□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Vps37dQ810I0 261 aa13.15□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 U2af1l4Q8BGJ9 220 aa13.15□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Cdkn2aipQ8BI72 563 aa13.15□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Tdp1Q8BJ37 609 aa13.15□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Lrch3Q8BVU0 778 aa13.15□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Rtn1Q8K0T0 780 aa13.15□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Lrrc2Q8VDB8 371 aa13.15□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Kdm4bQ91VY5 1086 aa13.15□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Serpinb3bQ9D1Q5 387 aa13.15□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Pidd1Q9ERV7 915 aa13.15□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Tob2Q9JM55 345 aa13.15□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 Fem1bQ9Z2G0 627 aa13.15□□□□□ -0.3
Ccdc28b-201ENSMUST00000030586 JcadQ5DTX6 1320 aa13.14□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Myh8P13542 1937 aa13.14□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 AunipE9Q6Z5 340 aa13.14□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Rad51bO35719 350 aa13.14□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Btg4O70552 250 aa13.14□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Gja8P28236 440 aa13.14□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Btbd1P58544 488 aa13.14□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Meis2P97367 477 aa13.14□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Fads2p1Q0VAX3 487 aa13.14□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Trappc3lQ4KL14 181 aa13.14□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Foxd1Q61345 456 aa13.14□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Galnt17Q7TT15 598 aa13.14□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Tbc1d5Q80XQ2 815 aa13.14□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Slitrk3Q810B9 980 aa13.14□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Pramel7Q810Y8 479 aa13.14□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Gjc2Q8BQU6 440 aa13.14□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Pof1bQ8K4L4 587 aa13.14□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Ccdc47Q9D024 483 aaKnown RBP13.14□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Ubxn8Q9QZ49 277 aa13.14□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Fkbp1bQ9Z2I2 108 aa13.14□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Cntnap2Q9CPW0 1332 aa13.13□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Gm42715A0A087WP63 3095 aaKnown RBP13.13□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Rnf19bA2A7Q9 732 aa13.13□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Nfx1B1AY10 1114 aaKnown RBP13.13□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Gm20425E9Q035 978 aaKnown RBP13.13□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Zbtb21E9Q444 1094 aa13.13□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 MthfslL7N466 203 aa13.13□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 SrprbP47758 269 aa13.13□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Ece1Q4PZA2 769 aa13.13□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Jakmip3Q5DTN8 844 aa13.13□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Ppp2r5bQ6PD28 497 aa13.13□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Ipo8Q7TMY7 1010 aa13.13□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 PhkbQ7TSH2 1085 aa13.13□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Ppp1r10Q80W00 888 aaKnown RBP13.13□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Cyp26b1Q811W2 512 aa13.13□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Kctd3Q8BFX3 815 aa13.13□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Yars2Q8BYL4 472 aaKnown RBP13.13□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 SltmQ8CH25 1031 aaKnown RBP13.13□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Havcr2Q8VIM0 281 aa13.13□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Bhmt2Q91WS4 363 aa13.13□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Pcdhgc5Q91XW9 944 aa13.13□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Fgd4Q91ZT5 766 aa13.13□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Prpf3Q922U1 683 aaKnown RBP13.13□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Cep89Q9CZX2 791 aa13.13□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Eif4enif1Q9EST3 983 aaKnown RBP13.13□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Twf2Q9Z0P5 349 aaKnown RBP13.13□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Pfkfb3A7UAK5 555 aa13.12□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 E030030I06RikJ3QML9 246 aa13.12□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Pitpnm1O35954 1243 aa13.12□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Stra6O70491 670 aa13.12□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Nedd1P33215 660 aa13.12□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 PtpreP49446 699 aa13.12□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Foxp1P58462 705 aa13.12□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Mars2Q499X9 586 aaKnown RBP13.12□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Rhpn1Q61085 643 aa13.12□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Ptpn18Q61152 453 aa13.12□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Eif3j2Q66JS6 263 aa13.12□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Usp6nlQ80XC3 819 aa13.12□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Plcd3Q8K2J0 785 aa13.12□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Kiaa1024Q8K3V7 917 aa13.12□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Acat1Q8QZT1 424 aa13.12□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Galntl5Q9D4M9 431 aa13.12□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Ccdc7Q9D541 371 aa13.12□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Rcan1Q9JHG6 198 aa13.12□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Stk39Q9Z1W9 556 aa13.12□□□□□ -0.31
Ccdc28b-201ENSMUST00000030586 Dhx8A2A4P0 1244 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 33.8 ms