RNA–Protein interactions for RNA: snR46

snR46, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR46, Length 197 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR46	snR46	FAF1	P40546	346 aa	Predicted RBP	1.01	□□□□□ -2.25
snR46	snR46	STR3	P53101	465 aa	Known RBP	1.01	□□□□□ -2.25
snR46	snR46	YPL014W	Q02606	381 aa		1.01	□□□□□ -2.25
snR46	snR46	SYO1	Q07395	620 aa		1.01	□□□□□ -2.25
snR46	snR46	BI3	Q9ZZW7	517 aa		1.01	□□□□□ -2.25
snR46	snR46	CDC15	P27636	974 aa		1	□□□□□ -2.25
snR46	snR46	TFC3	P34111	1160 aa		1	□□□□□ -2.25
snR46	snR46	TIF4631	P39935	952 aa	Known RBP	1	□□□□□ -2.25
snR46	snR46	PKP1	P40530	394 aa		1	□□□□□ -2.25
snR46	snR46	IMA1	P53051	589 aa		1	□□□□□ -2.25
snR46	snR46	PEX14	P53112	341 aa		1	□□□□□ -2.25
snR46	snR46	CEG1	Q01159	459 aa	Predicted RBP	1	□□□□□ -2.25
snR46	snR46	EMI2	Q04409	500 aa	Known RBP	1	□□□□□ -2.25
snR46	snR46	MRPL35	Q06678	367 aa		1	□□□□□ -2.25
snR46	snR46	YOL057W	Q08225	711 aa		1	□□□□□ -2.25
snR46	snR46	YDL009C	Q12210	107 aa		1	□□□□□ -2.25
snR46	snR46	TMA17	Q12513	150 aa		1	□□□□□ -2.25
snR46	snR46	GEX2	P36173	615 aa		0.99	□□□□□ -2.25
snR46	snR46	UBP12	P39538	1254 aa		0.99	□□□□□ -2.25
snR46	snR46	TMA108	P40462	946 aa		0.99	□□□□□ -2.25
snR46	snR46	DPB11	P47027	764 aa	Predicted RBP	0.99	□□□□□ -2.25
snR46	snR46	YJR120W	P47157	116 aa		0.99	□□□□□ -2.25
snR46	snR46	SMM1	P53720	384 aa	Known RBP	0.99	□□□□□ -2.25
snR46	snR46	COG6	P53959	839 aa		0.99	□□□□□ -2.25
snR46	snR46	MRPL51	Q06090	140 aa	Predicted RBP	0.99	□□□□□ -2.25
snR46	snR46	ESA1	Q08649	445 aa		0.99	□□□□□ -2.25
snR46	snR46	RRP6	Q12149	733 aa	Known RBP	0.99	□□□□□ -2.25
snR46	snR46	YPS3	Q12303	508 aa		0.99	□□□□□ -2.25
snR46	snR46	ARG81	P05085	880 aa		0.98	□□□□□ -2.25
snR46	snR46	HEM15	P16622	393 aa		0.98	□□□□□ -2.25
snR46	snR46	CDC60	P26637	1090 aa	Known RBP	0.98	□□□□□ -2.25
snR46	snR46	SRB5	P32585	307 aa		0.98	□□□□□ -2.25
snR46	snR46	SDH3	P33421	198 aa		0.98	□□□□□ -2.25
snR46	snR46	PIM1	P36775	1133 aa		0.98	□□□□□ -2.25
snR46	snR46	APM3	P38153	483 aa		0.98	□□□□□ -2.25
snR46	snR46	ASE1	P50275	885 aa		0.98	□□□□□ -2.25
snR46	snR46	INN1	P53901	409 aa		0.98	□□□□□ -2.25
snR46	snR46	TEP1	P53916	434 aa		0.98	□□□□□ -2.25
snR46	snR46	TSA2	Q04120	196 aa		0.98	□□□□□ -2.25
snR46	snR46	SDH5	Q08230	162 aa		0.98	□□□□□ -2.25
snR46	snR46	AMD1	P15274	810 aa	Known RBP	0.97	□□□□□ -2.25
snR46	snR46	PET123	P17558	318 aa		0.97	□□□□□ -2.25
snR46	snR46	CPR4	P25334	318 aa		0.97	□□□□□ -2.25
snR46	snR46	PAH1	P32567	862 aa		0.97	□□□□□ -2.25
snR46	snR46	SEF1	P34228	1148 aa		0.97	□□□□□ -2.25
snR46	snR46	KTR3	P38130	404 aa	Predicted RBP	0.97	□□□□□ -2.25
snR46	snR46	BMT2	P38278	337 aa		0.97	□□□□□ -2.25
snR46	snR46	DBP8	P38719	431 aa		0.97	□□□□□ -2.25
snR46	snR46	REE1	P40893	198 aa		0.97	□□□□□ -2.25
snR46	snR46	DUG3	P53871	357 aa		0.97	□□□□□ -2.25
snR46	snR46	RHO4	Q00246	291 aa		0.97	□□□□□ -2.25
snR46	snR46	YVH1	Q02256	364 aa	Known RBP	0.97	□□□□□ -2.25
snR46	snR46	IRC15	Q02733	499 aa		0.97	□□□□□ -2.25
snR46	snR46	TRS130	Q03660	1102 aa		0.97	□□□□□ -2.25
snR46	snR46	VPS74	Q06385	345 aa		0.97	□□□□□ -2.25
snR46	snR46	TMA16	Q08687	178 aa		0.97	□□□□□ -2.25
snR46	snR46	HSP26	P15992	214 aa	Known RBP RIP-Chip data	0.96	□□□□□ -2.26	not detected
snR46	snR46	NCP1	P16603	691 aa	Known RBP	0.96	□□□□□ -2.26
snR46	snR46	ENP1	P38333	483 aa	Known RBP	0.96	□□□□□ -2.26
snR46	snR46	FPR3	P38911	411 aa	Known RBP	0.96	□□□□□ -2.26
snR46	snR46	PEX25	Q02969	394 aa		0.96	□□□□□ -2.26
snR46	snR46	ECM30	Q06673	1274 aa		0.96	□□□□□ -2.26
snR46	snR46	TSR1	Q07381	788 aa	Known RBP	0.96	□□□□□ -2.26
snR46	snR46	INP53	Q12271	1107 aa		0.96	□□□□□ -2.26
snR46	snR46	YOL114C	Q12322	202 aa		0.96	□□□□□ -2.26
snR46	snR46	ERG27	Q12452	347 aa	Known RBP	0.96	□□□□□ -2.26
snR46	snR46	YBL111C	Q3E7Y5	667 aa		0.96	□□□□□ -2.26
snR46	snR46	PUT2	P07275	575 aa		0.95	□□□□□ -2.26
snR46	snR46	CLB4	P24871	460 aa		0.95	□□□□□ -2.26
snR46	snR46	HAT2	P39984	401 aa		0.95	□□□□□ -2.26
snR46	snR46	WWM1	P43582	211 aa	Known RBP	0.95	□□□□□ -2.26
snR46	snR46	RPS10B	P46784	105 aa	Known RBP	0.95	□□□□□ -2.26
snR46	snR46	PYK2	P52489	506 aa	Known RBP	0.95	□□□□□ -2.26
snR46	snR46	TOF1	P53840	1238 aa		0.95	□□□□□ -2.26
snR46	snR46	HRI1	Q05905	244 aa	Known RBP	0.95	□□□□□ -2.26
snR46	snR46	ATG9	Q12142	997 aa		0.95	□□□□□ -2.26
snR46	snR46	HIP1	P06775	603 aa		0.94	□□□□□ -2.26
snR46	snR46	PIF1	P07271	859 aa		0.94	□□□□□ -2.26
snR46	snR46	PFK2	P16862	959 aa	Known RBP RIP-Chip data	0.94	□□□□□ -2.26	not detected
snR46	snR46	RNA14	P25298	677 aa	Known RBP	0.94	□□□□□ -2.26
snR46	snR46	FRE1	P32791	686 aa		0.94	□□□□□ -2.26
snR46	snR46	CHK1	P38147	527 aa		0.94	□□□□□ -2.26
snR46	snR46	VID24	P38263	362 aa		0.94	□□□□□ -2.26
snR46	snR46	FMP10	P40098	244 aa		0.94	□□□□□ -2.26
snR46	snR46	PFK26	P40433	827 aa	Known RBP	0.94	□□□□□ -2.26
snR46	snR46	ELP2	P42935	788 aa		0.94	□□□□□ -2.26
snR46	snR46	SCD6	P45978	349 aa	Known RBP RIP-Chip data	0.94	□□□□□ -2.26	not detected
snR46	snR46	CPR6	P53691	371 aa	Known RBP	0.94	□□□□□ -2.26
snR46	snR46	CAF40	P53829	373 aa		0.94	□□□□□ -2.26
snR46	snR46	RSM23	Q01163	450 aa		0.94	□□□□□ -2.26
snR46	snR46	SHR3	Q02774	210 aa		0.94	□□□□□ -2.26
snR46	snR46	PIR3	Q03180	325 aa		0.94	□□□□□ -2.26
snR46	snR46	HIM1	Q06674	414 aa		0.94	□□□□□ -2.26
snR46	snR46	YPR091C	Q06833	770 aa		0.94	□□□□□ -2.26
snR46	snR46	IES4	Q08561	116 aa		0.94	□□□□□ -2.26
snR46	snR46	COX17	Q12287	69 aa		0.94	□□□□□ -2.26
snR46	snR46	CCH1	P50077	2039 aa		0.94	□□□□□ -2.26
snR46	snR46	CHS1	P08004	1131 aa		0.93	□□□□□ -2.26
snR46	snR46	EXO70	P19658	623 aa		0.93	□□□□□ -2.26
snR46	snR46	DAL2	P25335	343 aa		0.93	□□□□□ -2.26

Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms