RNA–Protein interactions for RNA: YPR134W

MSS18, Transcript of Nuclear encoded protein needed for splicing of mitochondrial intron, yeast

Gene MSS18, Length 807 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSS18	YPR134W	PDS5	Q04264	1277 aa		2.72	□□□□□ -1.97
MSS18	YPR134W	BRE1	Q07457	700 aa	Known RBP	2.72	□□□□□ -1.97
MSS18	YPR134W	RRP6	Q12149	733 aa	Known RBP	2.72	□□□□□ -1.97
MSS18	YPR134W	TMA7	Q3E764	64 aa	Known RBP	2.72	□□□□□ -1.97
MSS18	YPR134W	YRF1-3	P0CX14	1859 aa		2.71	□□□□□ -1.98
MSS18	YPR134W	YRF1-7	P0CX15	1859 aa		2.71	□□□□□ -1.98
MSS18	YPR134W	YRF1-6	P53819	1859 aa		2.71	□□□□□ -1.98
MSS18	YPR134W	ERG1	P32476	496 aa	Known RBP	2.71	□□□□□ -1.98
MSS18	YPR134W	MIA40	P36046	403 aa		2.71	□□□□□ -1.98
MSS18	YPR134W	NPR3	P38742	1146 aa		2.71	□□□□□ -1.98
MSS18	YPR134W	PHO90	P39535	881 aa		2.71	□□□□□ -1.98
MSS18	YPR134W	SMC3	P47037	1230 aa		2.71	□□□□□ -1.98
MSS18	YPR134W	YTP1	P53584	459 aa		2.71	□□□□□ -1.98
MSS18	YPR134W	MLC2	Q06580	163 aa		2.71	□□□□□ -1.98
MSS18	YPR134W	DIB1	Q06819	143 aa	Predicted RBP	2.71	□□□□□ -1.98
MSS18	YPR134W	ARP6	Q12509	438 aa		2.71	□□□□□ -1.98
MSS18	YPR134W	YRF1-4	O13559	1382 aa		2.71	□□□□□ -1.98
MSS18	YPR134W	RPP0	P05317	312 aa	Known RBP	2.7	□□□□□ -1.98
MSS18	YPR134W	RPS24A	P0CX31	135 aa	Known RBP	2.7	□□□□□ -1.98
MSS18	YPR134W	RPS24B	P0CX32	135 aa	Known RBP	2.7	□□□□□ -1.98
MSS18	YPR134W	SAN1	P22470	610 aa		2.7	□□□□□ -1.98
MSS18	YPR134W	CLB4	P24871	460 aa		2.7	□□□□□ -1.98
MSS18	YPR134W	YNK1	P36010	153 aa	Known RBP	2.7	□□□□□ -1.98
MSS18	YPR134W	GEX2	P36173	615 aa		2.7	□□□□□ -1.98
MSS18	YPR134W	AVT5	P38176	459 aa		2.7	□□□□□ -1.98
MSS18	YPR134W	YTA12	P40341	825 aa		2.7	□□□□□ -1.98
MSS18	YPR134W	TGL2	P54857	326 aa		2.7	□□□□□ -1.98
MSS18	YPR134W	TMA64	Q04600	565 aa	Known RBP	2.7	□□□□□ -1.98
MSS18	YPR134W	STP3	Q05937	343 aa		2.7	□□□□□ -1.98
MSS18	YPR134W	YOL159C	Q08300	171 aa		2.7	□□□□□ -1.98
MSS18	YPR134W	LYS2	P07702	1392 aa		2.7	□□□□□ -1.98
MSS18	YPR134W	SRB5	P32585	307 aa		2.69	□□□□□ -1.98
MSS18	YPR134W	PKP1	P40530	394 aa		2.69	□□□□□ -1.98
MSS18	YPR134W	DOT5	P40553	215 aa		2.69	□□□□□ -1.98
MSS18	YPR134W	GUF1	P46943	645 aa		2.69	□□□□□ -1.98
MSS18	YPR134W	BUG1	Q12191	341 aa		2.69	□□□□□ -1.98
MSS18	YPR134W	HXK2	P04807	486 aa	Known RBP	2.68	□□□□□ -1.98
MSS18	YPR134W	SWH1	P35845	1188 aa		2.68	□□□□□ -1.98
MSS18	YPR134W	SPC34	P36131	295 aa		2.68	□□□□□ -1.98
MSS18	YPR134W	FAA2	P39518	744 aa		2.68	□□□□□ -1.98
MSS18	YPR134W	SPC72	P39723	622 aa		2.68	□□□□□ -1.98
MSS18	YPR134W	SWP82	P43554	623 aa		2.68	□□□□□ -1.98
MSS18	YPR134W	YPI1	P43587	155 aa		2.68	□□□□□ -1.98
MSS18	YPR134W	YDL186W	P48568	277 aa		2.68	□□□□□ -1.98
MSS18	YPR134W	NNF2	P53253	936 aa		2.68	□□□□□ -1.98
MSS18	YPR134W	PAP2	P53632	584 aa	Known RBP	2.68	□□□□□ -1.98
MSS18	YPR134W	BOR1	P53838	576 aa		2.68	□□□□□ -1.98
MSS18	YPR134W	CSL4	P53859	292 aa	Predicted RBP	2.68	□□□□□ -1.98
MSS18	YPR134W	NUP100	Q02629	959 aa		2.68	□□□□□ -1.98
MSS18	YPR134W	HCR1	Q05775	265 aa	Known RBP	2.68	□□□□□ -1.98
MSS18	YPR134W	HIM1	Q06674	414 aa		2.68	□□□□□ -1.98
MSS18	YPR134W	APL4	Q12028	832 aa		2.68	□□□□□ -1.98
MSS18	YPR134W	ERG27	Q12452	347 aa	Known RBP	2.68	□□□□□ -1.98
MSS18	YPR134W	MPD2	Q99316	277 aa		2.68	□□□□□ -1.98
MSS18	YPR134W	RIM15	P43565	1770 aa		2.67	□□□□□ -1.98
MSS18	YPR134W	SUP35	P05453	685 aa	Known RBP	2.67	□□□□□ -1.98
MSS18	YPR134W	CMK1	P27466	446 aa	Known RBP	2.67	□□□□□ -1.98
MSS18	YPR134W	YKL050C	P35736	922 aa		2.67	□□□□□ -1.98
MSS18	YPR134W	PHD1	P36093	366 aa		2.67	□□□□□ -1.98
MSS18	YPR134W	PUG1	P40100	303 aa		2.67	□□□□□ -1.98
MSS18	YPR134W	HIS6	P40545	261 aa		2.67	□□□□□ -1.98
MSS18	YPR134W	YJL213W	P40896	331 aa		2.67	□□□□□ -1.98
MSS18	YPR134W	YFR020W	P43600	232 aa		2.67	□□□□□ -1.98
MSS18	YPR134W	DSD1	P53095	428 aa		2.67	□□□□□ -1.98
MSS18	YPR134W	TDA7	P53882	636 aa	Predicted RBP	2.67	□□□□□ -1.98
MSS18	YPR134W	YNL050C	P53952	270 aa		2.67	□□□□□ -1.98
MSS18	YPR134W	MOT3	P54785	490 aa	Known RBP	2.67	□□□□□ -1.98
MSS18	YPR134W	MSS11	Q03825	758 aa		2.67	□□□□□ -1.98
MSS18	YPR134W	SSP2	Q08646	371 aa		2.67	□□□□□ -1.98
MSS18	YPR134W	YLL056C	Q12177	298 aa		2.67	□□□□□ -1.98
MSS18	YPR134W	MSS18	P08593	268 aa		2.66	□□□□□ -1.98
MSS18	YPR134W	MRS3	P10566	314 aa		2.66	□□□□□ -1.98
MSS18	YPR134W	OSM1	P21375	501 aa	Known RBP	2.66	□□□□□ -1.98
MSS18	YPR134W	PTP2	P29461	750 aa		2.66	□□□□□ -1.98
MSS18	YPR134W	MCM4	P30665	933 aa	Known RBP	2.66	□□□□□ -1.98
MSS18	YPR134W	HSP104	P31539	908 aa	Known RBP	2.66	□□□□□ -1.98
MSS18	YPR134W	TIF3	P34167	436 aa	Known RBP	2.66	□□□□□ -1.98
MSS18	YPR134W	YBR138C	P38277	524 aa		2.66	□□□□□ -1.98
MSS18	YPR134W	YIL060W	P40519	144 aa		2.66	□□□□□ -1.98
MSS18	YPR134W	IKS1	P47042	667 aa		2.66	□□□□□ -1.98
MSS18	YPR134W	MET14	Q02196	202 aa		2.66	□□□□□ -1.98
MSS18	YPR134W	RPM2	Q02773	1202 aa		2.66	□□□□□ -1.98
MSS18	YPR134W	RMT2	Q03305	412 aa		2.66	□□□□□ -1.98
MSS18	YPR134W	ERP1	Q05359	219 aa	Known RBP	2.66	□□□□□ -1.98
MSS18	YPR134W	ATG26	Q06321	1198 aa		2.66	□□□□□ -1.98
MSS18	YPR134W	RDR1	Q08904	546 aa		2.66	□□□□□ -1.98
MSS18	YPR134W	AUS1	Q08409	1394 aa		2.65	□□□□□ -1.98
MSS18	YPR134W	TPK1	P06244	397 aa		2.65	□□□□□ -1.99
MSS18	YPR134W	GDH1	P07262	454 aa	Known RBP	2.65	□□□□□ -1.99
MSS18	YPR134W	MTF1	P14908	341 aa	Known RBP	2.65	□□□□□ -1.99
MSS18	YPR134W	PHO81	P17442	1178 aa		2.65	□□□□□ -1.99
MSS18	YPR134W	TYR1	P20049	452 aa		2.65	□□□□□ -1.99
MSS18	YPR134W	ACH1	P32316	526 aa		2.65	□□□□□ -1.99
MSS18	YPR134W	MRPL4	P36517	319 aa		2.65	□□□□□ -1.99
MSS18	YPR134W	NPR2	P39923	615 aa		2.65	□□□□□ -1.99
MSS18	YPR134W	SPG5	P42933	373 aa		2.65	□□□□□ -1.99
MSS18	YPR134W	CTF18	P49956	741 aa		2.65	□□□□□ -1.99
MSS18	YPR134W	PEX8	P53248	589 aa		2.65	□□□□□ -1.99
MSS18	YPR134W	SOL4	P53315	255 aa		2.65	□□□□□ -1.99
MSS18	YPR134W	ADD37	Q03233	198 aa		2.65	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms