RNA–Protein interactions for RNA: YPL147W

PXA1, Transcript of Subunit of a heterodimeric peroxisomal ABC transport complex, yeast

Gene PXA1, Length 2,613 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PXA1	YPL147W	TWF1	P53250	332 aa		4.88	□□□□□ -1.63
PXA1	YPL147W	RPT4	P53549	437 aa	Known RBP	4.88	□□□□□ -1.63
PXA1	YPL147W	RPL6A	Q02326	176 aa	Known RBP	4.88	□□□□□ -1.63
PXA1	YPL147W	HRQ1	Q05549	1077 aa		4.88	□□□□□ -1.63
PXA1	YPL147W	GAS4	Q08271	471 aa		4.88	□□□□□ -1.63
PXA1	YPL147W	RSA1	Q08932	381 aa		4.88	□□□□□ -1.63
PXA1	YPL147W	IES3	Q12345	250 aa		4.88	□□□□□ -1.63
PXA1	YPL147W	QCR2	P07257	368 aa		4.87	□□□□□ -1.63
PXA1	YPL147W	MSD1	P15179	658 aa	Known RBP	4.87	□□□□□ -1.63
PXA1	YPL147W	GUK1	P15454	187 aa	Known RBP	4.87	□□□□□ -1.63
PXA1	YPL147W	CDC23	P16522	626 aa		4.87	□□□□□ -1.63
PXA1	YPL147W	HOP1	P20050	605 aa		4.87	□□□□□ -1.63
PXA1	YPL147W	SCJ1	P25303	377 aa		4.87	□□□□□ -1.63
PXA1	YPL147W	BEM1	P29366	551 aa		4.87	□□□□□ -1.63
PXA1	YPL147W	ATP7	P30902	174 aa		4.87	□□□□□ -1.63
PXA1	YPL147W	RPT5	P33297	434 aa	Known RBP	4.87	□□□□□ -1.63
PXA1	YPL147W	YOX1	P34161	385 aa		4.87	□□□□□ -1.63
PXA1	YPL147W	MCX1	P38323	520 aa	Predicted RBP	4.87	□□□□□ -1.63
PXA1	YPL147W	ALG8	P40351	577 aa		4.87	□□□□□ -1.63
PXA1	YPL147W	MSB3	P48566	633 aa	Predicted RBP	4.87	□□□□□ -1.63
PXA1	YPL147W	YGR111W	P53265	400 aa		4.87	□□□□□ -1.63
PXA1	YPL147W	TNA1	P53322	534 aa		4.87	□□□□□ -1.63
PXA1	YPL147W	RCM1	P53972	490 aa		4.87	□□□□□ -1.63
PXA1	YPL147W	SWP1	Q02795	286 aa		4.87	□□□□□ -1.63
PXA1	YPL147W	SMC5	Q08204	1093 aa		4.87	□□□□□ -1.63
PXA1	YPL147W	PEX15	Q08215	383 aa		4.87	□□□□□ -1.63
PXA1	YPL147W	TGS1	Q12052	315 aa		4.87	□□□□□ -1.63
PXA1	YPL147W	ULA1	Q12059	462 aa		4.87	□□□□□ -1.63
PXA1	YPL147W	PSF3	Q12146	194 aa		4.87	□□□□□ -1.63
PXA1	YPL147W	NTO1	Q12311	748 aa		4.87	□□□□□ -1.63
PXA1	YPL147W	RVB2	Q12464	471 aa	Known RBP	4.87	□□□□□ -1.63
PXA1	YPL147W	PTC5	Q12511	572 aa		4.87	□□□□□ -1.63
PXA1	YPL147W	YLR278C	Q05854	1341 aa		4.87	□□□□□ -1.63
PXA1	YPL147W	PDC1	P06169	563 aa	Known RBP	4.87	□□□□□ -1.63
PXA1	YPL147W	SEC53	P07283	254 aa	Known RBP	4.87	□□□□□ -1.63
PXA1	YPL147W	NHP6A	P11632	93 aa	Known RBP	4.87	□□□□□ -1.63
PXA1	YPL147W	CHS2	P14180	963 aa		4.87	□□□□□ -1.63
PXA1	YPL147W	PEP3	P27801	918 aa		4.87	□□□□□ -1.63
PXA1	YPL147W	GDA1	P32621	518 aa		4.87	□□□□□ -1.63
PXA1	YPL147W	SWC5	P38326	303 aa		4.87	□□□□□ -1.63
PXA1	YPL147W	RRP3	P38712	501 aa	Known RBP	4.87	□□□□□ -1.63
PXA1	YPL147W	FMC1	P40491	155 aa		4.87	□□□□□ -1.63
PXA1	YPL147W	YJR154W	P47181	346 aa		4.87	□□□□□ -1.63
PXA1	YPL147W	CLA4	P48562	842 aa		4.87	□□□□□ -1.63
PXA1	YPL147W	MND1	P53102	219 aa		4.87	□□□□□ -1.63
PXA1	YPL147W	OKP1	P53298	406 aa		4.87	□□□□□ -1.63
PXA1	YPL147W	AQR1	P53943	586 aa		4.87	□□□□□ -1.63
PXA1	YPL147W	SLD5	Q03406	294 aa		4.87	□□□□□ -1.63
PXA1	YPL147W	MSC2	Q03455	724 aa		4.87	□□□□□ -1.63
PXA1	YPL147W	YML082W	Q04533	649 aa	Known RBP	4.87	□□□□□ -1.63
PXA1	YPL147W	YMR226C	Q05016	267 aa	Known RBP	4.87	□□□□□ -1.63
PXA1	YPL147W	MSC3	Q05812	728 aa		4.87	□□□□□ -1.63
PXA1	YPL147W	YBL029C-A	Q3E756	94 aa		4.87	□□□□□ -1.63
PXA1	YPL147W	RAD1	P06777	1100 aa		4.86	□□□□□ -1.63
PXA1	YPL147W	ADY2	P25613	283 aa		4.86	□□□□□ -1.63
PXA1	YPL147W	HEM12	P32347	362 aa	Predicted RBP	4.86	□□□□□ -1.63
PXA1	YPL147W	BET3	P36149	193 aa		4.86	□□□□□ -1.63
PXA1	YPL147W	AAP1	P37898	856 aa	Known RBP	4.86	□□□□□ -1.63
PXA1	YPL147W	TDP1	P38319	544 aa		4.86	□□□□□ -1.63
PXA1	YPL147W	NUP60	P39705	539 aa		4.86	□□□□□ -1.63
PXA1	YPL147W	UBP9	P39967	754 aa		4.86	□□□□□ -1.63
PXA1	YPL147W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
PXA1	YPL147W	ACS2	P52910	683 aa	Known RBP	4.86	□□□□□ -1.63
PXA1	YPL147W	DSD1	P53095	428 aa		4.86	□□□□□ -1.63
PXA1	YPL147W	COQ6	P53318	479 aa		4.86	□□□□□ -1.63
PXA1	YPL147W	RCF2	P53721	224 aa		4.86	□□□□□ -1.63
PXA1	YPL147W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
PXA1	YPL147W	ADE16	P54113	591 aa	Known RBP	4.86	□□□□□ -1.63
PXA1	YPL147W	EFR3	Q03653	782 aa	Known RBP	4.86	□□□□□ -1.63
PXA1	YPL147W	URH1	Q04179	340 aa		4.86	□□□□□ -1.63
PXA1	YPL147W	CDA1	Q06702	301 aa		4.86	□□□□□ -1.63
PXA1	YPL147W	THI3	Q07471	609 aa		4.86	□□□□□ -1.63
PXA1	YPL147W	THP3	Q12049	470 aa	Known RBP	4.86	□□□□□ -1.63
PXA1	YPL147W	ZRT2	Q12436	422 aa		4.86	□□□□□ -1.63
PXA1	YPL147W	SKM1	Q12469	655 aa		4.86	□□□□□ -1.63
PXA1	YPL147W	KIN28	P06242	306 aa		4.86	□□□□□ -1.63
PXA1	YPL147W	NHP6B	P11633	99 aa	Known RBP	4.86	□□□□□ -1.63
PXA1	YPL147W	RNA15	P25299	296 aa	Predicted RBP	4.86	□□□□□ -1.63
PXA1	YPL147W	BUD5	P25300	642 aa	Predicted RBP	4.86	□□□□□ -1.63
PXA1	YPL147W	URA7	P28274	579 aa	Known RBP	4.86	□□□□□ -1.63
PXA1	YPL147W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
PXA1	YPL147W	TCA17	P32613	152 aa		4.86	□□□□□ -1.63
PXA1	YPL147W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	RIP-Chip
PXA1	YPL147W	YBR238C	P38330	731 aa	Known RBP	4.86	□□□□□ -1.63
PXA1	YPL147W	TAE1	P38340	232 aa		4.86	□□□□□ -1.63
PXA1	YPL147W	YNG2	P38806	282 aa	Known RBP	4.86	□□□□□ -1.63
PXA1	YPL147W	LNP1	P38878	278 aa		4.86	□□□□□ -1.63
PXA1	YPL147W	NTA1	P40354	457 aa		4.86	□□□□□ -1.63
PXA1	YPL147W	EMW1	P42842	904 aa	Known RBP	4.86	□□□□□ -1.63
PXA1	YPL147W	YJR056C	P47115	236 aa		4.86	□□□□□ -1.63
PXA1	YPL147W	YGL138C	P53122	345 aa		4.86	□□□□□ -1.63
PXA1	YPL147W	KIN4	Q01919	800 aa		4.86	□□□□□ -1.63
PXA1	YPL147W	HER2	Q03557	464 aa		4.86	□□□□□ -1.63
PXA1	YPL147W	GPN3	Q06543	272 aa		4.86	□□□□□ -1.63
PXA1	YPL147W	YRA1	Q12159	226 aa	Known RBP	4.86	□□□□□ -1.63
PXA1	YPL147W	YDR061W	Q12298	539 aa		4.86	□□□□□ -1.63
PXA1	YPL147W	MDM20	Q12387	796 aa	Known RBP	4.86	□□□□□ -1.63
PXA1	YPL147W	YDL206W	Q12424	762 aa		4.86	□□□□□ -1.63
PXA1	YPL147W	ISN1	Q99312	450 aa		4.86	□□□□□ -1.63
PXA1	YPL147W	CHL1	P22516	861 aa	Predicted RBP	4.85	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms