RNA–Protein interactions for RNA: YPL104W

MSD1, Transcript of Mitochondrial aspartyl-tRNA synthetase, yeastyeast

Gene MSD1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSD1YPL104W GZF3P42944 551 aaKnown RBP3.61□□□□□ -1.83
MSD1YPL104W ASN2P49090 572 aaKnown RBP3.61□□□□□ -1.83
MSD1YPL104W RNR4P49723 345 aaKnown RBP3.61□□□□□ -1.83
MSD1YPL104W PSP1P50896 841 aaKnown RBP3.61□□□□□ -1.83
MSD1YPL104W TEL2P53038 688 aa3.61□□□□□ -1.83
MSD1YPL104W MCM6P53091 1017 aaKnown RBP3.61□□□□□ -1.83
MSD1YPL104W STR3P53101 465 aaKnown RBP3.61□□□□□ -1.83
MSD1YPL104W NNF2P53253 936 aa3.61□□□□□ -1.83
MSD1YPL104W COQ6P53318 479 aa3.61□□□□□ -1.83
MSD1YPL104W UBP2Q01476 1272 aa3.61□□□□□ -1.83
MSD1YPL104W PET117Q02771 107 aa3.61□□□□□ -1.83
MSD1YPL104W RNY1Q02933 434 aaKnown RBP3.61□□□□□ -1.83
MSD1YPL104W FMN1Q03778 218 aa3.61□□□□□ -1.83
MSD1YPL104W ATG33Q06485 197 aa3.61□□□□□ -1.83
MSD1YPL104W AVO1Q08236 1176 aa3.61□□□□□ -1.83
MSD1YPL104W ARD1P07347 238 aaPredicted RBP3.6□□□□□ -1.83
MSD1YPL104W SPE1P08432 466 aa3.6□□□□□ -1.83
MSD1YPL104W HMG1P12683 1054 aa3.6□□□□□ -1.83
MSD1YPL104W ACO1P19414 778 aaKnown RBP RIP-Chip data3.6□□□□□ -1.83not detected
MSD1YPL104W EXO70P19658 623 aa3.6□□□□□ -1.83
MSD1YPL104W PWP1P21304 576 aaKnown RBP3.6□□□□□ -1.83
MSD1YPL104W HOG1P32485 435 aa3.6□□□□□ -1.83
MSD1YPL104W SSE1P32589 693 aaKnown RBP3.6□□□□□ -1.83
MSD1YPL104W STE13P33894 931 aa3.6□□□□□ -1.83
MSD1YPL104W RRN3P36070 627 aa3.6□□□□□ -1.83
MSD1YPL104W MRPL40P36534 297 aa3.6□□□□□ -1.83
MSD1YPL104W MAK5P38112 773 aaPredicted RBP3.6□□□□□ -1.83
MSD1YPL104W KTR4P38131 464 aa3.6□□□□□ -1.83
MSD1YPL104W YHR182WP38870 785 aa3.6□□□□□ -1.83
MSD1YPL104W FMP10P40098 244 aa3.6□□□□□ -1.83
MSD1YPL104W BUD13P46947 266 aaPredicted RBP3.6□□□□□ -1.83
MSD1YPL104W MAD3P47074 515 aa3.6□□□□□ -1.83
MSD1YPL104W GCV1P48015 400 aa3.6□□□□□ -1.83
MSD1YPL104W MRM2P53123 320 aa3.6□□□□□ -1.83
MSD1YPL104W DAM1P53267 343 aa3.6□□□□□ -1.83
MSD1YPL104W NOP15P53927 220 aaPredicted RBP3.6□□□□□ -1.83
MSD1YPL104W ADE12P80210 433 aaKnown RBP3.6□□□□□ -1.83
MSD1YPL104W NAM8Q00539 523 aaKnown RBP3.6□□□□□ -1.83
MSD1YPL104W SNP1Q00916 300 aaPredicted RBP3.6□□□□□ -1.83
MSD1YPL104W RPN9Q04062 393 aaKnown RBP3.6□□□□□ -1.83
MSD1YPL104W HPT1Q04178 221 aaKnown RBP3.6□□□□□ -1.83
MSD1YPL104W MLC2Q06580 163 aa3.6□□□□□ -1.83
MSD1YPL104W BSP1Q06604 576 aa3.6□□□□□ -1.83
MSD1YPL104W SYT1Q06836 1226 aa3.6□□□□□ -1.83
MSD1YPL104W YLR012CQ07927 99 aa3.6□□□□□ -1.83
MSD1YPL104W YPQ1Q12010 308 aa3.6□□□□□ -1.83
MSD1YPL104W APC9Q12107 265 aa3.6□□□□□ -1.83
MSD1YPL104W CHS5Q12114 671 aaKnown RBP3.6□□□□□ -1.83
MSD1YPL104W TAO3P40468 2376 aa3.6□□□□□ -1.83
MSD1YPL104W YPR089WO13585 888 aa3.6□□□□□ -1.83
MSD1YPL104W HIP1P06775 603 aa3.6□□□□□ -1.83
MSD1YPL104W RHO2P06781 192 aa3.6□□□□□ -1.83
MSD1YPL104W MPH2P0CD99 609 aa3.6□□□□□ -1.83
MSD1YPL104W FPS1P23900 669 aa3.6□□□□□ -1.83
MSD1YPL104W PEX1P24004 1043 aa3.6□□□□□ -1.83
MSD1YPL104W YSP3P25036 478 aa3.6□□□□□ -1.83
MSD1YPL104W BEM1P29366 551 aa3.6□□□□□ -1.83
MSD1YPL104W SSH4P32343 579 aa3.6□□□□□ -1.83
MSD1YPL104W APM3P38153 483 aa3.6□□□□□ -1.83
MSD1YPL104W FZO1P38297 855 aa3.6□□□□□ -1.83
MSD1YPL104W ATG12P38316 186 aa3.6□□□□□ -1.83
MSD1YPL104W OSH7P38755 437 aa3.6□□□□□ -1.83
MSD1YPL104W YDR089WP38966 869 aa3.6□□□□□ -1.83
MSD1YPL104W SEO1P39709 593 aa3.6□□□□□ -1.83
MSD1YPL104W YJR061WP40355 935 aa3.6□□□□□ -1.83
MSD1YPL104W HIS6P40545 261 aa3.6□□□□□ -1.83
MSD1YPL104W YGR045CP53229 120 aa3.6□□□□□ -1.83
MSD1YPL104W NUP100Q02629 959 aa3.6□□□□□ -1.83
MSD1YPL104W LGE1Q02796 332 aaKnown RBP3.6□□□□□ -1.83
MSD1YPL104W ATP25Q03153 612 aa3.6□□□□□ -1.83
MSD1YPL104W YDR514CQ04408 483 aa3.6□□□□□ -1.83
MSD1YPL104W YDR109CQ04585 715 aa3.6□□□□□ -1.83
MSD1YPL104W RTN1Q04947 295 aaKnown RBP3.6□□□□□ -1.83
MSD1YPL104W PEX15Q08215 383 aa3.6□□□□□ -1.83
MSD1YPL104W OSW1Q08692 278 aa3.6□□□□□ -1.83
MSD1YPL104W YOR387CQ08910 206 aa3.6□□□□□ -1.83
MSD1YPL104W GUP2Q08929 609 aa3.6□□□□□ -1.83
MSD1YPL104W ENV7Q12003 364 aa3.6□□□□□ -1.83
MSD1YPL104W SCH9P11792 824 aaKnown RBP3.59□□□□□ -1.83
MSD1YPL104W HMG2P12684 1045 aa3.59□□□□□ -1.83
MSD1YPL104W NMT1P14743 455 aa3.59□□□□□ -1.83
MSD1YPL104W NSP1P14907 823 aaKnown RBP3.59□□□□□ -1.83
MSD1YPL104W HSC82P15108 705 aaKnown RBP3.59□□□□□ -1.83
MSD1YPL104W PRP6P19735 899 aaPredicted RBP3.59□□□□□ -1.83
MSD1YPL104W MRPL8P22353 238 aa3.59□□□□□ -1.83
MSD1YPL104W MIH1P23748 554 aa3.59□□□□□ -1.83
MSD1YPL104W DCC1P25559 380 aa3.59□□□□□ -1.83
MSD1YPL104W URK1P27515 501 aa3.59□□□□□ -1.83
MSD1YPL104W PRO1P32264 428 aa3.59□□□□□ -1.83
MSD1YPL104W AEP1P32493 518 aa3.59□□□□□ -1.83
MSD1YPL104W IMP3P32899 183 aaPredicted RBP3.59□□□□□ -1.83
MSD1YPL104W TFC3P34111 1160 aa3.59□□□□□ -1.83
MSD1YPL104W CTF13P35203 478 aa3.59□□□□□ -1.83
MSD1YPL104W ASK1P35734 292 aa3.59□□□□□ -1.83
MSD1YPL104W EMC3P36039 253 aa3.59□□□□□ -1.83
MSD1YPL104W YKL151CP36059 337 aa3.59□□□□□ -1.83
MSD1YPL104W POL12P38121 705 aaPredicted RBP3.59□□□□□ -1.83
MSD1YPL104W STB5P38699 743 aa3.59□□□□□ -1.83
MSD1YPL104W HSE1P38753 452 aa3.59□□□□□ -1.83
MSD1YPL104W FRT2P39734 528 aa3.59□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 47.7 ms