RNA–Protein interactions for RNA: YPL011C

TAF3, Transcript of TFIID subunit (47 kDa), yeast

Gene TAF3, Length 1,062 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TAF3	YPL011C	ARG81	P05085	880 aa		4.09	□□□□□ -1.75
TAF3	YPL011C	KGD1	P20967	1014 aa	Known RBP	4.09	□□□□□ -1.75
TAF3	YPL011C	RPS2	P25443	254 aa	Known RBP	4.09	□□□□□ -1.75
TAF3	YPL011C	PUP3	P25451	205 aa	Known RBP	4.09	□□□□□ -1.75
TAF3	YPL011C	CHS3	P29465	1165 aa		4.09	□□□□□ -1.75
TAF3	YPL011C	MUD2	P36084	527 aa	Known RBP	4.09	□□□□□ -1.75
TAF3	YPL011C	PHD1	P36093	366 aa		4.09	□□□□□ -1.75
TAF3	YPL011C	AUR1	P36107	401 aa	Predicted RBP	4.09	□□□□□ -1.75
TAF3	YPL011C	AZF1	P41696	914 aa		4.09	□□□□□ -1.75
TAF3	YPL011C	YMR018W	Q04364	514 aa		4.09	□□□□□ -1.75
TAF3	YPL011C	TEN1	Q07921	160 aa		4.09	□□□□□ -1.75
TAF3	YPL011C	SPE4	Q12455	300 aa		4.09	□□□□□ -1.75
TAF3	YPL011C	YMR230W-A	Q3E7B5	62 aa		4.09	□□□□□ -1.75
TAF3	YPL011C	YOR111W	Q99210	232 aa		4.09	□□□□□ -1.75
TAF3	YPL011C	ARD1	P07347	238 aa	Predicted RBP	4.08	□□□□□ -1.76
TAF3	YPL011C	YCK1	P23291	538 aa		4.08	□□□□□ -1.76
TAF3	YPL011C	PRE8	P23639	250 aa		4.08	□□□□□ -1.76
TAF3	YPL011C	BUD5	P25300	642 aa	Predicted RBP	4.08	□□□□□ -1.76
TAF3	YPL011C	SNC1	P31109	117 aa		4.08	□□□□□ -1.76
TAF3	YPL011C	RIM2	P38127	377 aa		4.08	□□□□□ -1.76
TAF3	YPL011C	VID27	P40157	782 aa		4.08	□□□□□ -1.76
TAF3	YPL011C	YJL070C	P40361	888 aa		4.08	□□□□□ -1.76
TAF3	YPL011C	LYS14	P40971	790 aa		4.08	□□□□□ -1.76
TAF3	YPL011C	APT1	P49435	187 aa	Known RBP	4.08	□□□□□ -1.76
TAF3	YPL011C	YGL260W	P53056	76 aa		4.08	□□□□□ -1.76
TAF3	YPL011C	RSM23	Q01163	450 aa		4.08	□□□□□ -1.76
TAF3	YPL011C	MSC1	Q03104	513 aa		4.08	□□□□□ -1.76
TAF3	YPL011C	ECM30	Q06673	1274 aa		4.08	□□□□□ -1.76
TAF3	YPL011C	CSR2	Q12734	1121 aa		4.08	□□□□□ -1.76
TAF3	YPL011C	SPT6	P23615	1451 aa	Known RBP	4.07	□□□□□ -1.76
TAF3	YPL011C	MCM4	P30665	933 aa	Known RBP	4.07	□□□□□ -1.76
TAF3	YPL011C	ERG1	P32476	496 aa	Known RBP	4.07	□□□□□ -1.76
TAF3	YPL011C	TRS65	P32893	560 aa		4.07	□□□□□ -1.76
TAF3	YPL011C	NUP133	P36161	1157 aa		4.07	□□□□□ -1.76
TAF3	YPL011C	LAG1	P38703	411 aa		4.07	□□□□□ -1.76
TAF3	YPL011C	YEL068C	P39977	110 aa		4.07	□□□□□ -1.76
TAF3	YPL011C	YDR415C	Q04033	374 aa	Predicted RBP	4.07	□□□□□ -1.76
TAF3	YPL011C	DPB4	Q04603	196 aa	Known RBP	4.07	□□□□□ -1.76
TAF3	YPL011C	ARP6	Q12509	438 aa		4.07	□□□□□ -1.76
TAF3	YPL011C	SGV1	P23293	657 aa	Known RBP	4.06	□□□□□ -1.76
TAF3	YPL011C	ACH1	P32316	526 aa		4.06	□□□□□ -1.76
TAF3	YPL011C	MIC60	P36112	540 aa		4.06	□□□□□ -1.76
TAF3	YPL011C	FMP46	P36141	133 aa	Known RBP	4.06	□□□□□ -1.76
TAF3	YPL011C	ROT2	P38138	954 aa		4.06	□□□□□ -1.76
TAF3	YPL011C	CCT4	P39078	528 aa	Known RBP	4.06	□□□□□ -1.76
TAF3	YPL011C	DUO1	P53168	247 aa	Known RBP	4.06	□□□□□ -1.76
TAF3	YPL011C	YVH1	Q02256	364 aa	Known RBP	4.06	□□□□□ -1.76
TAF3	YPL011C	MSS11	Q03825	758 aa		4.06	□□□□□ -1.76
TAF3	YPL011C	DIC1	Q06143	298 aa		4.06	□□□□□ -1.76
TAF3	YPL011C	DAP1	Q12091	152 aa		4.06	□□□□□ -1.76
TAF3	YPL011C	PHO2	P07269	559 aa		4.05	□□□□□ -1.76
TAF3	YPL011C	MRS3	P10566	314 aa		4.05	□□□□□ -1.76
TAF3	YPL011C	PMS1	P14242	873 aa		4.05	□□□□□ -1.76
TAF3	YPL011C	SSE2	P32590	693 aa	Known RBP	4.05	□□□□□ -1.76
TAF3	YPL011C	YBL055C	P34220	418 aa	Predicted RBP	4.05	□□□□□ -1.76
TAF3	YPL011C	CCT6	P39079	546 aa		4.05	□□□□□ -1.76
TAF3	YPL011C	AXL1	P40851	1208 aa		4.05	□□□□□ -1.76
TAF3	YPL011C	FAR3	P46671	204 aa		4.05	□□□□□ -1.76
TAF3	YPL011C	TDA7	P53882	636 aa	Predicted RBP	4.05	□□□□□ -1.76
TAF3	YPL011C	YTH1	Q06102	208 aa	Predicted RBP	4.05	□□□□□ -1.76
TAF3	YPL011C	SSK1	Q07084	712 aa		4.05	□□□□□ -1.76
TAF3	YPL011C	LUC7	Q07508	261 aa	Predicted RBP	4.05	□□□□□ -1.76
TAF3	YPL011C	THI20	Q08224	551 aa		4.05	□□□□□ -1.76
TAF3	YPL011C	YDR056C	Q12025	205 aa		4.05	□□□□□ -1.76
TAF3	YPL011C	NCE102	Q12207	173 aa	RIP-Chip data	4.05	□□□□□ -1.76	not detected
TAF3	YPL011C	PDH1	Q12428	516 aa	Known RBP	4.05	□□□□□ -1.76
TAF3	YPL011C	YBR126W-A	Q8TGU7	68 aa		4.05	□□□□□ -1.76
TAF3	YPL011C	XRN1	P22147	1528 aa	Known RBP	4.05	□□□□□ -1.76
TAF3	YPL011C	SEM1	O94742	89 aa		4.04	□□□□□ -1.76
TAF3	YPL011C	MF(ALPHA)1	P01149	165 aa		4.04	□□□□□ -1.76
TAF3	YPL011C	TYR1	P20049	452 aa		4.04	□□□□□ -1.76
TAF3	YPL011C	POL4	P25615	582 aa		4.04	□□□□□ -1.76
TAF3	YPL011C	YIH1	P25637	258 aa		4.04	□□□□□ -1.76
TAF3	YPL011C	PAH1	P32567	862 aa		4.04	□□□□□ -1.76
TAF3	YPL011C	RGT1	P32862	1170 aa		4.04	□□□□□ -1.76
TAF3	YPL011C	YBR144C	P34215	104 aa		4.04	□□□□□ -1.76
TAF3	YPL011C	YKL100C	P34248	587 aa		4.04	□□□□□ -1.76
TAF3	YPL011C	NOP16	P40007	231 aa	Known RBP	4.04	□□□□□ -1.76
TAF3	YPL011C	DIM1	P41819	318 aa	Known RBP	4.04	□□□□□ -1.76
TAF3	YPL011C	UPF3	P48412	387 aa	Known RBP	4.04	□□□□□ -1.76
TAF3	YPL011C	RPM2	Q02773	1202 aa		4.04	□□□□□ -1.76
TAF3	YPL011C	NGL3	Q03210	505 aa		4.04	□□□□□ -1.76
TAF3	YPL011C	YML037C	Q03703	340 aa		4.04	□□□□□ -1.76
TAF3	YPL011C	RBA50	Q04418	439 aa		4.04	□□□□□ -1.76
TAF3	YPL011C	FMP45	Q07651	309 aa		4.04	□□□□□ -1.76
TAF3	YPL011C	NMD4	Q12129	218 aa		4.04	□□□□□ -1.76
TAF3	YPL011C	YML002W	P0CF17	737 aa		4.03	□□□□□ -1.76
TAF3	YPL011C	BOS1	P25385	244 aa		4.03	□□□□□ -1.76
TAF3	YPL011C	IMG1	P25626	169 aa		4.03	□□□□□ -1.76
TAF3	YPL011C	CMK1	P27466	446 aa	Known RBP	4.03	□□□□□ -1.76
TAF3	YPL011C	TIF3	P34167	436 aa	Known RBP	4.03	□□□□□ -1.76
TAF3	YPL011C	YBL029W	P38201	376 aa		4.03	□□□□□ -1.76
TAF3	YPL011C	PTR3	P43606	678 aa		4.03	□□□□□ -1.76
TAF3	YPL011C	LCL3	P53153	274 aa		4.03	□□□□□ -1.76
TAF3	YPL011C	YGR127W	P53275	312 aa		4.03	□□□□□ -1.76
TAF3	YPL011C	SMM1	P53720	384 aa	Known RBP	4.03	□□□□□ -1.76
TAF3	YPL011C	SAM50	P53969	484 aa		4.03	□□□□□ -1.76
TAF3	YPL011C	RHO4	Q00246	291 aa		4.03	□□□□□ -1.76
TAF3	YPL011C	YPL014W	Q02606	381 aa		4.03	□□□□□ -1.76
TAF3	YPL011C	YMR160W	Q03823	816 aa		4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 18 ms