RNA–Protein interactions for RNA: YOR287C

RRP36, Transcript of Component of 90S preribosomes, yeastyeast

Gene RRP36, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP36YOR287C YPR003CP53394 754 aa3.83□□□□□ -1.8
RRP36YOR287C HOT1Q03213 719 aa3.83□□□□□ -1.8
RRP36YOR287C STE23Q06010 1027 aa3.83□□□□□ -1.8
RRP36YOR287C MMR1Q06324 491 aa3.83□□□□□ -1.8
RRP36YOR287C YLR352WQ06479 807 aa3.83□□□□□ -1.8
RRP36YOR287C VIP1Q06685 1146 aaKnown RBP3.83□□□□□ -1.8
RRP36YOR287C VAM6Q07468 1049 aa3.83□□□□□ -1.8
RRP36YOR287C RIX7Q07844 837 aaKnown RBP3.83□□□□□ -1.8
RRP36YOR287C SUL2Q12325 893 aa3.83□□□□□ -1.8
RRP36YOR287C PDR18P53756 1333 aa3.83□□□□□ -1.8
RRP36YOR287C CAT8P39113 1433 aa3.83□□□□□ -1.8
RRP36YOR287C YOR1P53049 1477 aa3.83□□□□□ -1.8
RRP36YOR287C PDR15Q04182 1529 aaKnown RBP3.83□□□□□ -1.8
RRP36YOR287C SNF2P22082 1703 aa3.83□□□□□ -1.8
RRP36YOR287C PSK1P31374 1356 aa3.82□□□□□ -1.8
RRP36YOR287C GFD2P25370 566 aaKnown RBP3.82□□□□□ -1.8
RRP36YOR287C PTC6P25646 442 aa3.82□□□□□ -1.8
RRP36YOR287C SSH4P32343 579 aa3.82□□□□□ -1.8
RRP36YOR287C DBP7P36120 742 aaKnown RBP3.82□□□□□ -1.8
RRP36YOR287C PSY4P38193 441 aa3.82□□□□□ -1.8
RRP36YOR287C IFA38P38286 347 aa3.82□□□□□ -1.8
RRP36YOR287C FSH1P38777 243 aaKnown RBP3.82□□□□□ -1.8
RRP36YOR287C APE4P38821 490 aa3.82□□□□□ -1.8
RRP36YOR287C YIL001WP40560 513 aa3.82□□□□□ -1.8
RRP36YOR287C ESBP6P53918 673 aa3.82□□□□□ -1.8
RRP36YOR287C YML131WQ03102 365 aa3.82□□□□□ -1.8
RRP36YOR287C FAR8Q05040 523 aa3.82□□□□□ -1.8
RRP36YOR287C FUS2Q05670 677 aa3.82□□□□□ -1.8
RRP36YOR287C SSQ1Q05931 657 aaPredicted RBP3.82□□□□□ -1.8
RRP36YOR287C STP3Q05937 343 aa3.82□□□□□ -1.8
RRP36YOR287C RRP9Q06506 573 aaKnown RBP3.82□□□□□ -1.8
RRP36YOR287C TSR2Q06672 205 aaKnown RBP3.82□□□□□ -1.8
RRP36YOR287C COX17Q12287 69 aa3.82□□□□□ -1.8
RRP36YOR287C CEX1Q12453 761 aa3.82□□□□□ -1.8
RRP36YOR287C REP1P03871 373 aa3.81□□□□□ -1.8
RRP36YOR287C SEN2P16658 377 aa3.81□□□□□ -1.8
RRP36YOR287C SPE2P21182 396 aa3.81□□□□□ -1.8
RRP36YOR287C KRR1P25586 316 aaPredicted RBP3.81□□□□□ -1.8
RRP36YOR287C HSP30P25619 332 aa3.81□□□□□ -1.8
RRP36YOR287C ITR2P30606 609 aa3.81□□□□□ -1.8
RRP36YOR287C SIP1P32578 815 aa3.81□□□□□ -1.8
RRP36YOR287C RAD5P32849 1169 aaPredicted RBP3.81□□□□□ -1.8
RRP36YOR287C SEC66P33754 206 aa3.81□□□□□ -1.8
RRP36YOR287C HCS1P34243 683 aa3.81□□□□□ -1.8
RRP36YOR287C PEX5P35056 612 aa3.81□□□□□ -1.8
RRP36YOR287C UIP5P36137 443 aa3.81□□□□□ -1.8
RRP36YOR287C ECM4P36156 370 aa3.81□□□□□ -1.8
RRP36YOR287C RTS1P38903 757 aa3.81□□□□□ -1.8
RRP36YOR287C SPT8P38915 602 aa3.81□□□□□ -1.8
RRP36YOR287C CAJ1P39101 391 aa3.81□□□□□ -1.8
RRP36YOR287C CDC1P40986 491 aa3.81□□□□□ -1.8
RRP36YOR287C GPD2P41911 440 aaKnown RBP3.81□□□□□ -1.8
RRP36YOR287C GCD14P46959 383 aaPredicted RBP3.81□□□□□ -1.8
RRP36YOR287C SNX4P47057 423 aa3.81□□□□□ -1.8
RRP36YOR287C YGL242CP53066 181 aa3.81□□□□□ -1.8
RRP36YOR287C PNG1Q02890 363 aa3.81□□□□□ -1.8
RRP36YOR287C YMR317WQ04893 1140 aa3.81□□□□□ -1.8
RRP36YOR287C APC5Q08683 685 aa3.81□□□□□ -1.8
RRP36YOR287C CLP1Q08685 445 aaPredicted RBP3.81□□□□□ -1.8
RRP36YOR287C YPL191CQ08930 360 aa3.81□□□□□ -1.8
RRP36YOR287C RUD3Q12234 484 aaKnown RBP3.81□□□□□ -1.8
RRP36YOR287C ENT1Q12518 454 aa3.81□□□□□ -1.8
RRP36YOR287C YSP2Q06681 1438 aa3.8□□□□□ -1.8
RRP36YOR287C TPK1P06244 397 aa3.8□□□□□ -1.8
RRP36YOR287C MTF2P10849 440 aa3.8□□□□□ -1.8
RRP36YOR287C BIK1P11709 440 aa3.8□□□□□ -1.8
RRP36YOR287C GCD2P12754 651 aaPredicted RBP3.8□□□□□ -1.8
RRP36YOR287C UBC1P21734 215 aaKnown RBP3.8□□□□□ -1.8
RRP36YOR287C PDE1P22434 369 aa3.8□□□□□ -1.8
RRP36YOR287C CDC60P26637 1090 aaKnown RBP3.8□□□□□ -1.8
RRP36YOR287C VPH1P32563 840 aaKnown RBP3.8□□□□□ -1.8
RRP36YOR287C XRS2P33301 854 aa3.8□□□□□ -1.8
RRP36YOR287C NUP120P35729 1037 aa3.8□□□□□ -1.8
RRP36YOR287C YKL050CP35736 922 aa3.8□□□□□ -1.8
RRP36YOR287C FMP46P36141 133 aaKnown RBP3.8□□□□□ -1.8
RRP36YOR287C UBP13P38187 747 aa3.8□□□□□ -1.8
RRP36YOR287C YBR242WP38331 238 aa3.8□□□□□ -1.8
RRP36YOR287C YHR218WP38899 603 aa3.8□□□□□ -1.8
RRP36YOR287C UME6P39001 836 aa3.8□□□□□ -1.8
RRP36YOR287C YHB1P39676 399 aaKnown RBP3.8□□□□□ -1.8
RRP36YOR287C TFG2P41896 400 aaPredicted RBP3.8□□□□□ -1.8
RRP36YOR287C YGL036WP53185 909 aaPredicted RBP3.8□□□□□ -1.8
RRP36YOR287C ECM11Q04110 302 aa3.8□□□□□ -1.8
RRP36YOR287C VTI1Q04338 217 aa3.8□□□□□ -1.8
RRP36YOR287C YMR111CQ04461 462 aaPredicted RBP3.8□□□□□ -1.8
RRP36YOR287C ARR2Q06597 130 aa3.8□□□□□ -1.8
RRP36YOR287C CSR1Q06705 408 aaKnown RBP3.8□□□□□ -1.8
RRP36YOR287C YLR112WQ12130 139 aa3.8□□□□□ -1.8
RRP36YOR287C LSO2Q3E772 92 aaKnown RBP3.8□□□□□ -1.8
RRP36YOR287C YMR230W-AQ3E7B5 62 aa3.8□□□□□ -1.8
RRP36YOR287C TY3B-GQ99315 1547 aa3.8□□□□□ -1.8
RRP36YOR287C SSC1P0CS90 654 aaKnown RBP3.79□□□□□ -1.8
RRP36YOR287C HOM3P10869 527 aa3.79□□□□□ -1.8
RRP36YOR287C PFK2P16862 959 aaKnown RBP RIP-Chip data3.79□□□□□ -1.8not detected
RRP36YOR287C TYR1P20049 452 aa3.79□□□□□ -1.8
RRP36YOR287C RPO26P20435 155 aa3.79□□□□□ -1.8
RRP36YOR287C VPS1P21576 704 aaKnown RBP3.79□□□□□ -1.8
RRP36YOR287C YEL043WP32618 956 aa3.79□□□□□ -1.8
RRP36YOR287C ARC19P33204 171 aaKnown RBP3.79□□□□□ -1.8
RRP36YOR287C SLC1P33333 303 aa3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms