RNA–Protein interactions for RNA: YOR261C

RPN8, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN8, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN8YOR261C YER130CP39959 443 aa4.38□□□□□ -1.71
RPN8YOR261C MAF1P41910 395 aa4.38□□□□□ -1.71
RPN8YOR261C CUL3P53202 744 aa4.38□□□□□ -1.71
RPN8YOR261C RSM23Q01163 450 aa4.38□□□□□ -1.71
RPN8YOR261C TMA64Q04600 565 aaKnown RBP4.38□□□□□ -1.71
RPN8YOR261C YMR317WQ04893 1140 aa4.38□□□□□ -1.71
RPN8YOR261C ECM30Q06673 1274 aa4.38□□□□□ -1.71
RPN8YOR261C ETT1Q08421 412 aaKnown RBP4.38□□□□□ -1.71
RPN8YOR261C YDR056CQ12025 205 aa4.38□□□□□ -1.71
RPN8YOR261C ARD1P07347 238 aaPredicted RBP4.37□□□□□ -1.71
RPN8YOR261C GLN3P18494 730 aa4.37□□□□□ -1.71
RPN8YOR261C BUD5P25300 642 aaPredicted RBP4.37□□□□□ -1.71
RPN8YOR261C PUP3P25451 205 aaKnown RBP4.37□□□□□ -1.71
RPN8YOR261C PHD1P36093 366 aa4.37□□□□□ -1.71
RPN8YOR261C AZF1P41696 914 aa4.37□□□□□ -1.71
RPN8YOR261C DUO1P53168 247 aaKnown RBP4.37□□□□□ -1.71
RPN8YOR261C DPB4Q04603 196 aaKnown RBP4.37□□□□□ -1.71
RPN8YOR261C YBR126W-AQ8TGU7 68 aa4.37□□□□□ -1.71
RPN8YOR261C RPS2P25443 254 aaKnown RBP4.36□□□□□ -1.71
RPN8YOR261C SNC1P31109 117 aa4.36□□□□□ -1.71
RPN8YOR261C RGT1P32862 1170 aa4.36□□□□□ -1.71
RPN8YOR261C TRS65P32893 560 aa4.36□□□□□ -1.71
RPN8YOR261C ROT2P38138 954 aa4.36□□□□□ -1.71
RPN8YOR261C YBL029WP38201 376 aa4.36□□□□□ -1.71
RPN8YOR261C NOP16P40007 231 aaKnown RBP4.36□□□□□ -1.71
RPN8YOR261C MSC1Q03104 513 aa4.36□□□□□ -1.71
RPN8YOR261C YDR415CQ04033 374 aaPredicted RBP4.36□□□□□ -1.71
RPN8YOR261C LUC7Q07508 261 aaPredicted RBP4.36□□□□□ -1.71
RPN8YOR261C ARP6Q12509 438 aa4.36□□□□□ -1.71
RPN8YOR261C POL4P25615 582 aa4.35□□□□□ -1.71
RPN8YOR261C MCM4P30665 933 aaKnown RBP4.35□□□□□ -1.71
RPN8YOR261C PAH1P32567 862 aa4.35□□□□□ -1.71
RPN8YOR261C SSE2P32590 693 aaKnown RBP4.35□□□□□ -1.71
RPN8YOR261C YBR144CP34215 104 aa4.35□□□□□ -1.71
RPN8YOR261C MIC60P36112 540 aa4.35□□□□□ -1.71
RPN8YOR261C NUP133P36161 1157 aa4.35□□□□□ -1.71
RPN8YOR261C RIM2P38127 377 aa4.35□□□□□ -1.71
RPN8YOR261C LAG1P38703 411 aa4.35□□□□□ -1.71
RPN8YOR261C YJL070CP40361 888 aa4.35□□□□□ -1.71
RPN8YOR261C FAR3P46671 204 aa4.35□□□□□ -1.71
RPN8YOR261C APT1P49435 187 aaKnown RBP4.35□□□□□ -1.71
RPN8YOR261C YGL260WP53056 76 aa4.35□□□□□ -1.71
RPN8YOR261C NMD4Q12129 218 aa4.35□□□□□ -1.71
RPN8YOR261C CSR2Q12734 1121 aa4.35□□□□□ -1.71
RPN8YOR261C SEM1O94742 89 aa4.34□□□□□ -1.71
RPN8YOR261C MF(ALPHA)1P01149 165 aa4.34□□□□□ -1.71
RPN8YOR261C BOS1P25385 244 aa4.34□□□□□ -1.71
RPN8YOR261C YIH1P25637 258 aa4.34□□□□□ -1.71
RPN8YOR261C CMK1P27466 446 aaKnown RBP4.34□□□□□ -1.71
RPN8YOR261C ERG1P32476 496 aaKnown RBP4.34□□□□□ -1.71
RPN8YOR261C YBL055CP34220 418 aaPredicted RBP4.34□□□□□ -1.71
RPN8YOR261C PTR3P43606 678 aa4.34□□□□□ -1.71
RPN8YOR261C UPF3P48412 387 aaKnown RBP4.34□□□□□ -1.71
RPN8YOR261C LCL3P53153 274 aa4.34□□□□□ -1.71
RPN8YOR261C YGR127WP53275 312 aa4.34□□□□□ -1.71
RPN8YOR261C NGL3Q03210 505 aa4.34□□□□□ -1.71
RPN8YOR261C YML037CQ03703 340 aa4.34□□□□□ -1.71
RPN8YOR261C BUD22Q04347 519 aaKnown RBP4.34□□□□□ -1.71
RPN8YOR261C DIC1Q06143 298 aa4.34□□□□□ -1.71
RPN8YOR261C SSK1Q07084 712 aa4.34□□□□□ -1.71
RPN8YOR261C HUA2Q12134 243 aa4.34□□□□□ -1.71
RPN8YOR261C PDH1Q12428 516 aaKnown RBP4.34□□□□□ -1.71
RPN8YOR261C NOP58Q12499 511 aaKnown RBP4.34□□□□□ -1.71
RPN8YOR261C SGV1P23293 657 aaKnown RBP4.33□□□□□ -1.72
RPN8YOR261C IMG1P25626 169 aa4.33□□□□□ -1.72
RPN8YOR261C ACH1P32316 526 aa4.33□□□□□ -1.72
RPN8YOR261C YKL100CP34248 587 aa4.33□□□□□ -1.72
RPN8YOR261C CCT6P39079 546 aa4.33□□□□□ -1.72
RPN8YOR261C FLC2P39719 783 aa4.33□□□□□ -1.72
RPN8YOR261C AXL1P40851 1208 aa4.33□□□□□ -1.72
RPN8YOR261C TDA7P53882 636 aaPredicted RBP4.33□□□□□ -1.72
RPN8YOR261C YVH1Q02256 364 aaKnown RBP4.33□□□□□ -1.72
RPN8YOR261C MSS11Q03825 758 aa4.33□□□□□ -1.72
RPN8YOR261C NCE102Q12207 173 aaRIP-Chip data4.33□□□□□ -1.72not detected
RPN8YOR261C YMR230W-AQ3E7B5 62 aa4.33□□□□□ -1.72
RPN8YOR261C SAN1P22470 610 aa4.32□□□□□ -1.72
RPN8YOR261C SAC6P32599 642 aaKnown RBP4.32□□□□□ -1.72
RPN8YOR261C FMP46P36141 133 aaKnown RBP4.32□□□□□ -1.72
RPN8YOR261C RPL32P38061 130 aaKnown RBP4.32□□□□□ -1.72
RPN8YOR261C ICS2P38284 255 aa4.32□□□□□ -1.72
RPN8YOR261C DIM1P41819 318 aaKnown RBP4.32□□□□□ -1.72
RPN8YOR261C SMM1P53720 384 aaKnown RBP4.32□□□□□ -1.72
RPN8YOR261C YMR160WQ03823 816 aa4.32□□□□□ -1.72
RPN8YOR261C FMP45Q07651 309 aa4.32□□□□□ -1.72
RPN8YOR261C YEH2Q07950 538 aa4.32□□□□□ -1.72
RPN8YOR261C DAP1Q12091 152 aa4.32□□□□□ -1.72
RPN8YOR261C MRS3P10566 314 aa4.31□□□□□ -1.72
RPN8YOR261C PMS1P14242 873 aa4.31□□□□□ -1.72
RPN8YOR261C AAC3P18238 307 aa4.31□□□□□ -1.72
RPN8YOR261C TIF3P34167 436 aaKnown RBP4.31□□□□□ -1.72
RPN8YOR261C CCT4P39078 528 aaKnown RBP4.31□□□□□ -1.72
RPN8YOR261C SAM50P53969 484 aa4.31□□□□□ -1.72
RPN8YOR261C RHO4Q00246 291 aa4.31□□□□□ -1.72
RPN8YOR261C YPL014WQ02606 381 aa4.31□□□□□ -1.72
RPN8YOR261C RBA50Q04418 439 aa4.31□□□□□ -1.72
RPN8YOR261C YEH1Q07804 573 aa4.31□□□□□ -1.72
RPN8YOR261C THI20Q08224 551 aa4.31□□□□□ -1.72
RPN8YOR261C ENT1Q12518 454 aa4.31□□□□□ -1.72
RPN8YOR261C MRP13P12686 339 aa4.3□□□□□ -1.72
RPN8YOR261C TYR1P20049 452 aa4.3□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 26.9 ms