RNA–Protein interactions for RNA: YOR018W

ROD1, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene ROD1, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROD1YOR018W PHA2P32452 334 aa3.81□□□□□ -1.8
ROD1YOR018W BEM3P32873 1128 aa3.81□□□□□ -1.8
ROD1YOR018W STE13P33894 931 aa3.81□□□□□ -1.8
ROD1YOR018W PTH2P34222 208 aa3.81□□□□□ -1.8
ROD1YOR018W MRPL16P38064 232 aa3.81□□□□□ -1.8
ROD1YOR018W FUI1P38196 639 aa3.81□□□□□ -1.8
ROD1YOR018W YHL041WP38730 149 aa3.81□□□□□ -1.8
ROD1YOR018W MUP3P38734 546 aa3.81□□□□□ -1.8
ROD1YOR018W YTA6P40328 754 aa3.81□□□□□ -1.8
ROD1YOR018W IRR1P40541 1150 aa3.81□□□□□ -1.8
ROD1YOR018W SEC27P41811 889 aaKnown RBP3.81□□□□□ -1.8
ROD1YOR018W NMA2P53204 395 aa3.81□□□□□ -1.8
ROD1YOR018W PRM1P53835 661 aa3.81□□□□□ -1.8
ROD1YOR018W AQR1P53943 586 aa3.81□□□□□ -1.8
ROD1YOR018W SUB1P54000 292 aaKnown RBP3.81□□□□□ -1.8
ROD1YOR018W MET14Q02196 202 aa3.81□□□□□ -1.8
ROD1YOR018W RMI1Q02685 241 aa3.81□□□□□ -1.8
ROD1YOR018W TFB2Q02939 513 aa3.81□□□□□ -1.8
ROD1YOR018W GLO2Q05584 274 aa3.81□□□□□ -1.8
ROD1YOR018W YLR177WQ06251 628 aa3.81□□□□□ -1.8
ROD1YOR018W MCP2Q06567 569 aa3.81□□□□□ -1.8
ROD1YOR018W OPI10Q08202 246 aa3.81□□□□□ -1.8
ROD1YOR018W VHS3Q08438 674 aa3.81□□□□□ -1.8
ROD1YOR018W MDY2Q12285 212 aa3.81□□□□□ -1.8
ROD1YOR018W GLO4Q12320 285 aa3.81□□□□□ -1.8
ROD1YOR018W YPT6Q99260 215 aa3.81□□□□□ -1.8
ROD1YOR018W HIS5P07172 385 aa3.8□□□□□ -1.8
ROD1YOR018W HSP60P19882 572 aaKnown RBP3.8□□□□□ -1.8
ROD1YOR018W PUP3P25451 205 aaKnown RBP3.8□□□□□ -1.8
ROD1YOR018W PDB1P32473 366 aaKnown RBP3.8□□□□□ -1.8
ROD1YOR018W RPT5P33297 434 aaKnown RBP3.8□□□□□ -1.8
ROD1YOR018W SDH3P33421 198 aa3.8□□□□□ -1.8
ROD1YOR018W SIP2P34164 415 aaKnown RBP3.8□□□□□ -1.8
ROD1YOR018W HEK2P38199 381 aaKnown RBP RIP-Chip data3.8□□□□□ -1.8 RIP-Chip
ROD1YOR018W TAE1P38340 232 aa3.8□□□□□ -1.8
ROD1YOR018W PCL5P38794 229 aa3.8□□□□□ -1.8
ROD1YOR018W YRB1P41920 201 aaKnown RBP3.8□□□□□ -1.8
ROD1YOR018W YJL049WP47048 450 aa3.8□□□□□ -1.8
ROD1YOR018W IPI3P53877 555 aa3.8□□□□□ -1.8
ROD1YOR018W ORC3P54790 616 aa3.8□□□□□ -1.8
ROD1YOR018W PET117Q02771 107 aa3.8□□□□□ -1.8
ROD1YOR018W HEL2Q05580 639 aaKnown RBP3.8□□□□□ -1.8
ROD1YOR018W YPR114WQ06107 315 aa3.8□□□□□ -1.8
ROD1YOR018W OPT2Q06593 877 aa3.8□□□□□ -1.8
ROD1YOR018W YDL073WQ07454 984 aa3.8□□□□□ -1.8
ROD1YOR018W TY1A-BLQ12266 440 aa3.8□□□□□ -1.8
ROD1YOR018W ICT1Q12385 394 aa3.8□□□□□ -1.8
ROD1YOR018W SUC2P00724 532 aa3.8□□□□□ -1.8
ROD1YOR018W FUM1P08417 488 aaKnown RBP3.8□□□□□ -1.8
ROD1YOR018W GCY1P14065 312 aaKnown RBP RIP-Chip data3.8□□□□□ -1.8not detected
ROD1YOR018W PRI2P20457 528 aa3.8□□□□□ -1.8
ROD1YOR018W VPS34P22543 875 aa3.8□□□□□ -1.8
ROD1YOR018W TRX2P22803 104 aaKnown RBP3.8□□□□□ -1.8
ROD1YOR018W IMG2P25642 146 aaPredicted RBP3.8□□□□□ -1.8
ROD1YOR018W BRF1P29056 596 aa3.8□□□□□ -1.8
ROD1YOR018W NRP1P32770 719 aaKnown RBP RIP-Chip data3.8□□□□□ -1.8not detected
ROD1YOR018W PEX5P35056 612 aa3.8□□□□□ -1.8
ROD1YOR018W CAB3P36076 571 aa3.8□□□□□ -1.8
ROD1YOR018W SEA4P38164 1038 aa3.8□□□□□ -1.8
ROD1YOR018W OSH7P38755 437 aa3.8□□□□□ -1.8
ROD1YOR018W GGA2P38817 585 aaKnown RBP3.8□□□□□ -1.8
ROD1YOR018W MNN1P39106 762 aa3.8□□□□□ -1.8
ROD1YOR018W PTR3P43606 678 aa3.8□□□□□ -1.8
ROD1YOR018W STB2P46679 850 aa3.8□□□□□ -1.8
ROD1YOR018W YJR124CP47159 448 aa3.8□□□□□ -1.8
ROD1YOR018W PYK2P52489 506 aaKnown RBP3.8□□□□□ -1.8
ROD1YOR018W BOL2P53082 120 aa3.8□□□□□ -1.8
ROD1YOR018W USE1P53146 245 aa3.8□□□□□ -1.8
ROD1YOR018W BIO5P53744 561 aaKnown RBP3.8□□□□□ -1.8
ROD1YOR018W SMA1Q02651 245 aa3.8□□□□□ -1.8
ROD1YOR018W GAS3Q03655 524 aa3.8□□□□□ -1.8
ROD1YOR018W SSL1Q04673 461 aaPredicted RBP3.8□□□□□ -1.8
ROD1YOR018W ATG10Q07879 167 aa3.8□□□□□ -1.8
ROD1YOR018W SMF3Q12078 473 aaPredicted RBP3.8□□□□□ -1.8
ROD1YOR018W PST1Q12355 444 aa3.8□□□□□ -1.8
ROD1YOR018W RHO2P06781 192 aa3.79□□□□□ -1.8
ROD1YOR018W CDC21P06785 304 aa3.79□□□□□ -1.8
ROD1YOR018W FUS1P11710 512 aa3.79□□□□□ -1.8
ROD1YOR018W SEC15P22224 910 aa3.79□□□□□ -1.8
ROD1YOR018W RAD14P28519 371 aa3.79□□□□□ -1.8
ROD1YOR018W RML2P32611 393 aa3.79□□□□□ -1.8
ROD1YOR018W LIP5P32875 414 aa3.79□□□□□ -1.8
ROD1YOR018W PRP18P33411 251 aaPredicted RBP3.79□□□□□ -1.8
ROD1YOR018W RFC3P38629 340 aa3.79□□□□□ -1.8
ROD1YOR018W PIK1P39104 1066 aa3.79□□□□□ -1.8
ROD1YOR018W SIP4P46954 829 aa3.79□□□□□ -1.8
ROD1YOR018W YPT32P51996 222 aaKnown RBP3.79□□□□□ -1.8
ROD1YOR018W TAF6P53040 516 aa3.79□□□□□ -1.8
ROD1YOR018W LSC1P53598 329 aaKnown RBP3.79□□□□□ -1.8
ROD1YOR018W SNO2P53823 222 aa3.79□□□□□ -1.8
ROD1YOR018W NOP15P53927 220 aaPredicted RBP3.79□□□□□ -1.8
ROD1YOR018W HOT1Q03213 719 aa3.79□□□□□ -1.8
ROD1YOR018W SPO20Q04359 397 aa3.79□□□□□ -1.8
ROD1YOR018W RCO1Q04779 684 aa3.79□□□□□ -1.8
ROD1YOR018W RTT10Q08924 1013 aa3.79□□□□□ -1.8
ROD1YOR018W GNT1Q12096 491 aa3.79□□□□□ -1.8
ROD1YOR018W THI80P35202 319 aa3.79□□□□□ -1.8
ROD1YOR018W YSW1P38280 609 aa3.79□□□□□ -1.8
ROD1YOR018W SRP72P38688 640 aaKnown RBP3.79□□□□□ -1.8
ROD1YOR018W LRP1P38801 184 aaKnown RBP3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms