RNA–Protein interactions for RNA: YNR031C

SSK2, Transcript of MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway, yeast

Gene SSK2, Length 4,740 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSK2	YNR031C	SDH8	P38345	138 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	MGE1	P38523	228 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	YHR202W	P38887	602 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	FRT2	P39734	528 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	BTT1	P40314	149 aa	Predicted RBP	1.49	□□□□□ -2.17
SSK2	YNR031C	HXT8	P40886	569 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	1.49	□□□□□ -2.17	not detected
SSK2	YNR031C	RPS10B	P46784	105 aa	Known RBP	1.49	□□□□□ -2.17
SSK2	YNR031C	YJR030C	P47101	745 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	TEL2	P53038	688 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	TWF1	P53250	332 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	YTP1	P53584	459 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	YNL146W	P53906	100 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	RPS15	Q01855	142 aa	Known RBP	1.49	□□□□□ -2.17
SSK2	YNR031C	YLR287C	Q05881	355 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	MCM21	Q06675	368 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	SDO1	Q07953	250 aa	Known RBP	1.49	□□□□□ -2.17
SSK2	YNR031C	SIL1	Q08199	421 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	RRT8	Q08219	342 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	RPS10A	Q08745	105 aa	Predicted RBP	1.49	□□□□□ -2.17
SSK2	YNR031C	PTC5	Q12511	572 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	CTF3	Q12748	733 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	YLR358C	O13565	187 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	COX2	P00410	251 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	HAP2	P06774	265 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	RNR2	P09938	399 aa	Known RBP	1.49	□□□□□ -2.17
SSK2	YNR031C	KIN2	P13186	1147 aa	Known RBP	1.49	□□□□□ -2.17
SSK2	YNR031C	VPS34	P22543	875 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	TKL1	P23254	680 aa	Known RBP	1.49	□□□□□ -2.17
SSK2	YNR031C	APL1	P27351	700 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	MSS51	P32335	436 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	RSM22	P36056	628 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	YKL151C	P36059	337 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	SHM1	P37292	490 aa	Predicted RBP	1.49	□□□□□ -2.17
SSK2	YNR031C	CCL1	P37366	393 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	NTC20	P38302	140 aa	Predicted RBP	1.49	□□□□□ -2.17
SSK2	YNR031C	PRS3	P38689	320 aa	Known RBP	1.49	□□□□□ -2.17
SSK2	YNR031C	FLC2	P39719	783 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	NTA1	P40354	457 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	MDJ2	P42834	146 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	ELP2	P42935	788 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	FAR7	P43592	221 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	ALB1	P47019	175 aa	Predicted RBP	1.49	□□□□□ -2.17
SSK2	YNR031C	MNT2	P53059	558 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	LSC2	P53312	427 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	TUB4	P53378	473 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	OGG1	P53397	376 aa	Predicted RBP	1.49	□□□□□ -2.17
SSK2	YNR031C	YNR068C	P53754	272 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	ALG11	P53954	548 aa	Known RBP	1.49	□□□□□ -2.17
SSK2	YNR031C	STE20	Q03497	939 aa	Known RBP	1.49	□□□□□ -2.17
SSK2	YNR031C	ADE13	Q05911	482 aa	Known RBP	1.49	□□□□□ -2.17
SSK2	YNR031C	THP3	Q12049	470 aa	Known RBP	1.49	□□□□□ -2.17
SSK2	YNR031C	GET3	Q12154	354 aa	Known RBP	1.49	□□□□□ -2.17
SSK2	YNR031C	NBP2	Q12163	236 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	RPN5	Q12250	445 aa	Known RBP	1.49	□□□□□ -2.17
SSK2	YNR031C	YPR071W	Q12346	211 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	ARP6	Q12509	438 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	NOT5	Q12514	560 aa	Predicted RBP	1.49	□□□□□ -2.17
SSK2	YNR031C	HXK1	P04806	485 aa	Known RBP	1.49	□□□□□ -2.17
SSK2	YNR031C	RPC40	P07703	335 aa	Known RBP	1.49	□□□□□ -2.17
SSK2	YNR031C	MAS2	P11914	482 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	PCT1	P13259	424 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	MSS116	P15424	664 aa	Known RBP	1.49	□□□□□ -2.17
SSK2	YNR031C	DAL81	P21657	970 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	PRP28	P23394	588 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	PHO3	P24031	467 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	SLM5	P25345	492 aa	Known RBP	1.49	□□□□□ -2.17
SSK2	YNR031C	RRT12	P25381	491 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	PDC6	P26263	563 aa	Known RBP	1.49	□□□□□ -2.17
SSK2	YNR031C	ADK2	P26364	225 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	RPC19	P28000	142 aa	Known RBP	1.49	□□□□□ -2.17
SSK2	YNR031C	GPI10	P30777	616 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	HIS7	P33734	552 aa	Known RBP	1.49	□□□□□ -2.17
SSK2	YNR031C	STB6	P36085	766 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	TGL4	P36165	910 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	FMP23	P38231	175 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	RFS1	P38234	210 aa	Known RBP	1.49	□□□□□ -2.17
SSK2	YNR031C	YHR045W	P38775	560 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	POP2	P39008	433 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	MVP1	P40959	511 aa	Known RBP	1.49	□□□□□ -2.17
SSK2	YNR031C	ATP22	P50273	684 aa	Predicted RBP	1.49	□□□□□ -2.17
SSK2	YNR031C	HFM1	P51979	1187 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	YML6	P51998	286 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	SEH1	P53011	349 aa	Known RBP	1.49	□□□□□ -2.17
SSK2	YNR031C	TOF1	P53840	1238 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	PRP38	Q00723	242 aa	Predicted RBP	1.49	□□□□□ -2.17
SSK2	YNR031C	ARA2	Q04212	335 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	INM2	Q05533	292 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	TAZ1	Q06510	381 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	ERF2	Q06551	359 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	ADY3	Q07732	790 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	DIA2	Q08496	732 aa	Predicted RBP	1.49	□□□□□ -2.17
SSK2	YNR031C	RGT2	Q12300	763 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	MED1	Q12321	566 aa		1.49	□□□□□ -2.17
SSK2	YNR031C	HTZ1	Q12692	134 aa	Known RBP	1.49	□□□□□ -2.17
SSK2	YNR031C	PDE2	P06776	526 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	MET2	P08465	486 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	YML002W	P0CF17	737 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	CHS2	P14180	963 aa		1.48	□□□□□ -2.17
SSK2	YNR031C	SAC7	P17121	654 aa		1.48	□□□□□ -2.17

Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms