RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C IMP3P32899 183 aaPredicted RBP8.53□□□□□ -1.04
RPD3YNL330C CTF13P35203 478 aa8.53□□□□□ -1.04
RPD3YNL330C CAF4P36130 643 aa8.53□□□□□ -1.04
RPD3YNL330C YBR056WP38081 501 aa8.53□□□□□ -1.04
RPD3YNL330C YBR284WP38150 797 aa8.53□□□□□ -1.04
RPD3YNL330C YHR218WP38899 603 aa8.53□□□□□ -1.04
RPD3YNL330C RBG1P39729 369 aa8.53□□□□□ -1.04
RPD3YNL330C ARB1P40024 610 aaKnown RBP8.53□□□□□ -1.04
RPD3YNL330C YRB2P40517 327 aa8.53□□□□□ -1.04
RPD3YNL330C OPT1P40897 799 aa8.53□□□□□ -1.04
RPD3YNL330C BUD13P46947 266 aaPredicted RBP8.53□□□□□ -1.04
RPD3YNL330C VPS25P47142 202 aa8.53□□□□□ -1.04
RPD3YNL330C RPA14P50106 137 aa8.53□□□□□ -1.04
RPD3YNL330C MET13P53128 600 aa8.53□□□□□ -1.04
RPD3YNL330C CLD1P53264 445 aa8.53□□□□□ -1.04
RPD3YNL330C BNI4P53858 892 aa8.53□□□□□ -1.04
RPD3YNL330C SED5Q01590 340 aa8.53□□□□□ -1.04
RPD3YNL330C TOF2Q02208 771 aa8.53□□□□□ -1.04
RPD3YNL330C GOT1Q03554 138 aa8.53□□□□□ -1.04
RPD3YNL330C CLU1Q03690 1277 aaKnown RBP8.53□□□□□ -1.04
RPD3YNL330C RAD33Q04231 177 aa8.53□□□□□ -1.04
RPD3YNL330C YOL159CQ08300 171 aa8.53□□□□□ -1.04
RPD3YNL330C RSA1Q08932 381 aa8.53□□□□□ -1.04
RPD3YNL330C SAM3Q08986 587 aa8.53□□□□□ -1.04
RPD3YNL330C IOC2Q12072 812 aa8.53□□□□□ -1.04
RPD3YNL330C MRH1Q12117 320 aaPredicted RBP8.53□□□□□ -1.04
RPD3YNL330C LCB4Q12246 624 aa8.53□□□□□ -1.04
RPD3YNL330C SUT2Q12286 268 aa8.53□□□□□ -1.04
RPD3YNL330C AMD1P15274 810 aaKnown RBP8.52□□□□□ -1.05
RPD3YNL330C CMK2P22517 447 aa8.52□□□□□ -1.05
RPD3YNL330C YCK2P23292 546 aaKnown RBP8.52□□□□□ -1.05
RPD3YNL330C VPH1P32563 840 aaKnown RBP8.52□□□□□ -1.05
RPD3YNL330C RPS1AP33442 255 aaKnown RBP8.52□□□□□ -1.05
RPD3YNL330C TFA2P36145 328 aa8.52□□□□□ -1.05
RPD3YNL330C HMT1P38074 348 aa8.52□□□□□ -1.05
RPD3YNL330C EFM1P38732 585 aa8.52□□□□□ -1.05
RPD3YNL330C SSZ1P38788 538 aaKnown RBP8.52□□□□□ -1.05
RPD3YNL330C ACO2P39533 789 aa8.52□□□□□ -1.05
RPD3YNL330C YEL023CP39992 682 aa8.52□□□□□ -1.05
RPD3YNL330C YIR007WP40566 764 aa8.52□□□□□ -1.05
RPD3YNL330C FKH2P41813 862 aa8.52□□□□□ -1.05
RPD3YNL330C YRB1P41920 201 aaKnown RBP8.52□□□□□ -1.05
RPD3YNL330C STB1P42845 420 aa8.52□□□□□ -1.05
RPD3YNL330C UPF3P48412 387 aaKnown RBP8.52□□□□□ -1.05
RPD3YNL330C KEL2P50090 882 aa8.52□□□□□ -1.05
RPD3YNL330C SAP4P53036 818 aa8.52□□□□□ -1.05
RPD3YNL330C TRM12Q04235 462 aa8.52□□□□□ -1.05
RPD3YNL330C RCO1Q04779 684 aa8.52□□□□□ -1.05
RPD3YNL330C RIF2Q06208 395 aa8.52□□□□□ -1.05
RPD3YNL330C GPB1Q08886 897 aa8.52□□□□□ -1.05
RPD3YNL330C LEA1Q08963 238 aaPredicted RBP8.52□□□□□ -1.05
RPD3YNL330C YVC1Q12324 675 aa8.52□□□□□ -1.05
RPD3YNL330C YOL159C-AQ3E769 90 aa8.52□□□□□ -1.05
RPD3YNL330C APM4Q99186 491 aa8.52□□□□□ -1.05
RPD3YNL330C ARG3P05150 338 aa8.51□□□□□ -1.05
RPD3YNL330C CTR86P25355 563 aa8.51□□□□□ -1.05
RPD3YNL330C EMC1P25574 760 aa8.51□□□□□ -1.05
RPD3YNL330C VMA6P32366 345 aaKnown RBP8.51□□□□□ -1.05
RPD3YNL330C SAC1P32368 623 aaKnown RBP8.51□□□□□ -1.05
RPD3YNL330C TPO5P36029 618 aa8.51□□□□□ -1.05
RPD3YNL330C NTR2P36118 322 aaPredicted RBP8.51□□□□□ -1.05
RPD3YNL330C SPC34P36131 295 aa8.51□□□□□ -1.05
RPD3YNL330C MRPL17P36528 281 aa8.51□□□□□ -1.05
RPD3YNL330C ECM13P38195 257 aa8.51□□□□□ -1.05
RPD3YNL330C YBR225WP38321 900 aa8.51□□□□□ -1.05
RPD3YNL330C ARP1P38696 384 aa8.51□□□□□ -1.05
RPD3YNL330C YHR045WP38775 560 aa8.51□□□□□ -1.05
RPD3YNL330C YHR202WP38887 602 aa8.51□□□□□ -1.05
RPD3YNL330C IRR1P40541 1150 aa8.51□□□□□ -1.05
RPD3YNL330C BST1P43571 1029 aa8.51□□□□□ -1.05
RPD3YNL330C REG1Q00816 1014 aa8.51□□□□□ -1.05
RPD3YNL330C RSM24Q03976 319 aa8.51□□□□□ -1.05
RPD3YNL330C GSF2Q04697 403 aaKnown RBP8.51□□□□□ -1.05
RPD3YNL330C MCM21Q06675 368 aa8.51□□□□□ -1.05
RPD3YNL330C YDL114WQ07530 308 aa8.51□□□□□ -1.05
RPD3YNL330C YOL036WQ08206 761 aa8.51□□□□□ -1.05
RPD3YNL330C HER1Q12276 1246 aa8.51□□□□□ -1.05
RPD3YNL330C ICT1Q12385 394 aa8.51□□□□□ -1.05
RPD3YNL330C PFK27Q12471 397 aaPredicted RBP8.51□□□□□ -1.05
RPD3YNL330C HTA2P04912 132 aa8.5□□□□□ -1.05
RPD3YNL330C PHO3P24031 467 aa8.5□□□□□ -1.05
RPD3YNL330C DCC1P25559 380 aa8.5□□□□□ -1.05
RPD3YNL330C STE14P32584 239 aa8.5□□□□□ -1.05
RPD3YNL330C TSA1P34760 196 aaKnown RBP8.5□□□□□ -1.05
RPD3YNL330C AVT6P40074 448 aa8.5□□□□□ -1.05
RPD3YNL330C ALG8P40351 577 aa8.5□□□□□ -1.05
RPD3YNL330C YJL070CP40361 888 aa8.5□□□□□ -1.05
RPD3YNL330C KTR7P40504 517 aa8.5□□□□□ -1.05
RPD3YNL330C SHY1P53266 389 aa8.5□□□□□ -1.05
RPD3YNL330C YNR068CP53754 272 aa8.5□□□□□ -1.05
RPD3YNL330C ORC3P54790 616 aa8.5□□□□□ -1.05
RPD3YNL330C ARP4P80428 489 aa8.5□□□□□ -1.05
RPD3YNL330C NUT2Q06213 157 aa8.5□□□□□ -1.05
RPD3YNL330C DTD1Q07648 150 aaKnown RBP8.5□□□□□ -1.05
RPD3YNL330C YLR012CQ07927 99 aa8.5□□□□□ -1.05
RPD3YNL330C SLF1Q12034 447 aaKnown RBP8.5□□□□□ -1.05
RPD3YNL330C YOR131CQ12486 218 aa8.5□□□□□ -1.05
RPD3YNL330C RPS9AO13516 197 aaKnown RBP8.49□□□□□ -1.05
RPD3YNL330C REP1P03871 373 aa8.49□□□□□ -1.05
RPD3YNL330C PEX3P28795 441 aa8.49□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms