RNA–Protein interactions for RNA: YML103C

NUP188, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP188, Length 4,968 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP188YML103C COS5P47187 383 aa1.32□□□□□ -2.2
NUP188YML103C YGL138CP53122 345 aa1.32□□□□□ -2.2
NUP188YML103C YNL181WP53878 407 aa1.32□□□□□ -2.2
NUP188YML103C ERG13P54839 491 aaKnown RBP1.32□□□□□ -2.2
NUP188YML103C TIM10P87108 93 aa1.32□□□□□ -2.2
NUP188YML103C RPL6AQ02326 176 aaKnown RBP1.32□□□□□ -2.2
NUP188YML103C GIS1Q03833 894 aa1.32□□□□□ -2.2
NUP188YML103C EMI2Q04409 500 aaKnown RBP1.32□□□□□ -2.2
NUP188YML103C ECM22Q05958 814 aaPredicted RBP1.32□□□□□ -2.2
NUP188YML103C COS7Q07788 383 aa1.32□□□□□ -2.2
NUP188YML103C DIS3Q08162 1001 aaKnown RBP1.32□□□□□ -2.2
NUP188YML103C GPN2Q08726 347 aaPredicted RBP1.32□□□□□ -2.2
NUP188YML103C YOR389WQ08912 624 aa1.32□□□□□ -2.2
NUP188YML103C LSP1Q12230 341 aaKnown RBP1.32□□□□□ -2.2
NUP188YML103C BUD14P27637 709 aa1.32□□□□□ -2.2
NUP188YML103C YME1P32795 747 aa1.32□□□□□ -2.2
NUP188YML103C TCD2P36101 447 aaKnown RBP1.32□□□□□ -2.2
NUP188YML103C TSC10P38342 320 aa1.32□□□□□ -2.2
NUP188YML103C CCT6P39079 546 aa1.32□□□□□ -2.2
NUP188YML103C SWP82P43554 623 aa1.32□□□□□ -2.2
NUP188YML103C TOM22P49334 152 aa1.32□□□□□ -2.2
NUP188YML103C NRD1P53617 575 aaKnown RBP RIP-Chip data1.32□□□□□ -2.2not detected
NUP188YML103C ERO1Q03103 563 aa1.32□□□□□ -2.2
NUP188YML103C YDR131CQ03899 556 aa1.32□□□□□ -2.2
NUP188YML103C DPB4Q04603 196 aaKnown RBP1.32□□□□□ -2.2
NUP188YML103C MRD1Q06106 887 aaKnown RBP1.32□□□□□ -2.2
NUP188YML103C PDR8Q06149 701 aa1.32□□□□□ -2.2
NUP188YML103C CYK3Q07533 885 aa1.32□□□□□ -2.2
NUP188YML103C SRN2Q99176 213 aa1.32□□□□□ -2.2
NUP188YML103C PUT2P07275 575 aa1.32□□□□□ -2.2
NUP188YML103C STE12P13574 688 aa1.32□□□□□ -2.2
NUP188YML103C PRP2P20095 876 aaPredicted RBP1.32□□□□□ -2.2
NUP188YML103C RPB8P20436 146 aa1.32□□□□□ -2.2
NUP188YML103C OPI1P21957 404 aa1.32□□□□□ -2.2
NUP188YML103C TOA1P32773 286 aa1.32□□□□□ -2.2
NUP188YML103C MDL1P33310 695 aa1.32□□□□□ -2.2
NUP188YML103C YNK1P36010 153 aaKnown RBP1.32□□□□□ -2.2
NUP188YML103C MSR1P38714 643 aa1.32□□□□□ -2.2
NUP188YML103C PHO90P39535 881 aa1.32□□□□□ -2.2
NUP188YML103C JHD1P40034 492 aa1.32□□□□□ -2.2
NUP188YML103C FMP10P40098 244 aa1.32□□□□□ -2.2
NUP188YML103C SEC28P40509 296 aaKnown RBP1.32□□□□□ -2.2
NUP188YML103C DSD1P53095 428 aa1.32□□□□□ -2.2
NUP188YML103C ARE2P53629 642 aaKnown RBP1.32□□□□□ -2.2
NUP188YML103C YMR160WQ03823 816 aa1.32□□□□□ -2.2
NUP188YML103C SOV1Q04748 898 aa1.32□□□□□ -2.2
NUP188YML103C YML053CQ04978 212 aa1.32□□□□□ -2.2
NUP188YML103C RAD34Q06665 692 aa1.32□□□□□ -2.2
NUP188YML103C PCL8Q08966 492 aa1.32□□□□□ -2.2
NUP188YML103C YRF1-4O13559 1382 aa1.32□□□□□ -2.2
NUP188YML103C YML133CQ03099 1374 aa1.32□□□□□ -2.2
NUP188YML103C YLL067CQ07888 1374 aa1.32□□□□□ -2.2
NUP188YML103C YLL066CQ99208 1374 aa1.32□□□□□ -2.2
NUP188YML103C TUB1P09733 447 aaKnown RBP1.31□□□□□ -2.2
NUP188YML103C PCT1P13259 424 aa1.31□□□□□ -2.2
NUP188YML103C MCM4P30665 933 aaKnown RBP1.31□□□□□ -2.2
NUP188YML103C RPL32P38061 130 aaKnown RBP1.31□□□□□ -2.2
NUP188YML103C UBP13P38187 747 aa1.31□□□□□ -2.2
NUP188YML103C ELO1P39540 310 aa1.31□□□□□ -2.2
NUP188YML103C YJL107CP42947 387 aa1.31□□□□□ -2.2
NUP188YML103C STB2P46679 850 aa1.31□□□□□ -2.2
NUP188YML103C FYV8P46949 817 aaKnown RBP1.31□□□□□ -2.2
NUP188YML103C STB4P50104 949 aa1.31□□□□□ -2.2
NUP188YML103C SUN4P53616 420 aa1.31□□□□□ -2.2
NUP188YML103C IDP3P53982 420 aaKnown RBP1.31□□□□□ -2.2
NUP188YML103C TOF2Q02208 771 aa1.31□□□□□ -2.2
NUP188YML103C SMA1Q02651 245 aa1.31□□□□□ -2.2
NUP188YML103C PEX25Q02969 394 aa1.31□□□□□ -2.2
NUP188YML103C RRB1Q04225 511 aaKnown RBP1.31□□□□□ -2.2
NUP188YML103C SGT1Q08446 395 aa1.31□□□□□ -2.2
NUP188YML103C BUD7Q08754 746 aa1.31□□□□□ -2.2
NUP188YML103C MSL5Q12186 476 aaKnown RBP RIP-Chip data1.31□□□□□ -2.2not detected
NUP188YML103C TRM13Q12383 476 aa1.31□□□□□ -2.2
NUP188YML103C SNU66Q12420 587 aaPredicted RBP1.31□□□□□ -2.2
NUP188YML103C PGA3Q12746 312 aaKnown RBP1.31□□□□□ -2.2
NUP188YML103C HIS4P00815 799 aaKnown RBP1.31□□□□□ -2.2
NUP188YML103C CLB1P24868 471 aa1.31□□□□□ -2.2
NUP188YML103C KRE2P27809 442 aa1.31□□□□□ -2.2
NUP188YML103C IDH2P28241 369 aaKnown RBP1.31□□□□□ -2.2
NUP188YML103C WBP1P33767 430 aaKnown RBP1.31□□□□□ -2.2
NUP188YML103C MMS4P38257 691 aa1.31□□□□□ -2.2
NUP188YML103C PSD1P39006 500 aa1.31□□□□□ -2.2
NUP188YML103C CFD1P40558 293 aa1.31□□□□□ -2.2
NUP188YML103C CAK1P43568 368 aaPredicted RBP1.31□□□□□ -2.2
NUP188YML103C SSN8P47821 323 aa1.31□□□□□ -2.2
NUP188YML103C GND2P53319 492 aa1.31□□□□□ -2.2
NUP188YML103C RPT4P53549 437 aaKnown RBP1.31□□□□□ -2.2
NUP188YML103C CAC2Q04199 468 aa1.31□□□□□ -2.2
NUP188YML103C RSF1Q05043 376 aa1.31□□□□□ -2.2
NUP188YML103C POS5Q06892 414 aa1.31□□□□□ -2.2
NUP188YML103C CEX1Q12453 761 aa1.31□□□□□ -2.2
NUP188YML103C KAR3P17119 729 aa1.31□□□□□ -2.2
NUP188YML103C YCR007CP25354 239 aa1.31□□□□□ -2.2
NUP188YML103C HOT13P36078 116 aa1.31□□□□□ -2.2
NUP188YML103C UIP5P36137 443 aa1.31□□□□□ -2.2
NUP188YML103C STV1P37296 890 aa1.31□□□□□ -2.2
NUP188YML103C ARA1P38115 344 aa1.31□□□□□ -2.2
NUP188YML103C EFM2P38347 419 aa1.31□□□□□ -2.2
NUP188YML103C YHR210CP38893 341 aa1.31□□□□□ -2.2
NUP188YML103C YGL036WP53185 909 aaPredicted RBP1.31□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms