RNA–Protein interactions for RNA: YLR211C

ATG38, Transcript of Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I, yeastyeast

Gene ATG38, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG38YLR211C RPR2P40571 144 aa3.38□□□□□ -1.87
ATG38YLR211C LYS4P49367 693 aaPredicted RBP3.38□□□□□ -1.87
ATG38YLR211C COS10P52924 374 aa3.38□□□□□ -1.87
ATG38YLR211C BOR1P53838 576 aa3.38□□□□□ -1.87
ATG38YLR211C YVH1Q02256 364 aaKnown RBP3.38□□□□□ -1.87
ATG38YLR211C GRC3Q07845 632 aa3.38□□□□□ -1.87
ATG38YLR211C YEH2Q07950 538 aa3.38□□□□□ -1.87
ATG38YLR211C GDH1P07262 454 aaKnown RBP3.37□□□□□ -1.87
ATG38YLR211C SYN8P31377 255 aa3.37□□□□□ -1.87
ATG38YLR211C CBF2P32504 956 aa3.37□□□□□ -1.87
ATG38YLR211C MTR2P34232 184 aaKnown RBP3.37□□□□□ -1.87
ATG38YLR211C ROT2P38138 954 aa3.37□□□□□ -1.87
ATG38YLR211C SAM50P53969 484 aa3.37□□□□□ -1.87
ATG38YLR211C SSK1Q07084 712 aa3.37□□□□□ -1.87
ATG38YLR211C SSM4P40318 1319 aa3.37□□□□□ -1.87
ATG38YLR211C SPE2P21182 396 aa3.36□□□□□ -1.87
ATG38YLR211C SIP2P34164 415 aaKnown RBP3.36□□□□□ -1.87
ATG38YLR211C PTH2P34222 208 aa3.36□□□□□ -1.87
ATG38YLR211C ECM15P35195 104 aa3.36□□□□□ -1.87
ATG38YLR211C KTR3P38130 404 aaPredicted RBP3.36□□□□□ -1.87
ATG38YLR211C LAG1P38703 411 aa3.36□□□□□ -1.87
ATG38YLR211C DBP8P38719 431 aa3.36□□□□□ -1.87
ATG38YLR211C YFR016CP43597 1233 aaKnown RBP3.36□□□□□ -1.87
ATG38YLR211C SIP4P46954 829 aa3.36□□□□□ -1.87
ATG38YLR211C RTT101P47050 842 aa3.36□□□□□ -1.87
ATG38YLR211C YJR008WP47085 338 aa3.36□□□□□ -1.87
ATG38YLR211C AAD10P47182 288 aa3.36□□□□□ -1.87
ATG38YLR211C YGR021WP53212 290 aa3.36□□□□□ -1.87
ATG38YLR211C RSM23Q01163 450 aa3.36□□□□□ -1.87
ATG38YLR211C YPL014WQ02606 381 aa3.36□□□□□ -1.87
ATG38YLR211C RIX7Q07844 837 aaKnown RBP3.36□□□□□ -1.87
ATG38YLR211C ARG81P05085 880 aa3.35□□□□□ -1.87
ATG38YLR211C KGD1P20967 1014 aaKnown RBP3.35□□□□□ -1.87
ATG38YLR211C MCK1P21965 375 aaKnown RBP3.35□□□□□ -1.87
ATG38YLR211C SLC1P33333 303 aa3.35□□□□□ -1.87
ATG38YLR211C RPH1P39956 796 aa3.35□□□□□ -1.87
ATG38YLR211C TPM2P40414 161 aa3.35□□□□□ -1.87
ATG38YLR211C ERG26P53199 349 aaKnown RBP3.35□□□□□ -1.87
ATG38YLR211C MSC1Q03104 513 aa3.35□□□□□ -1.87
ATG38YLR211C ERP1Q05359 219 aaKnown RBP3.35□□□□□ -1.87
ATG38YLR211C ECM30Q06673 1274 aa3.35□□□□□ -1.87
ATG38YLR211C PSR1Q07800 427 aa3.35□□□□□ -1.87
ATG38YLR211C ENT4Q07872 247 aa3.35□□□□□ -1.87
ATG38YLR211C TEN1Q07921 160 aa3.35□□□□□ -1.87
ATG38YLR211C YLL056CQ12177 298 aa3.35□□□□□ -1.87
ATG38YLR211C SAN1P22470 610 aa3.34□□□□□ -1.87
ATG38YLR211C NDC1P32500 655 aa3.34□□□□□ -1.87
ATG38YLR211C PCA1P38360 1216 aa3.34□□□□□ -1.87
ATG38YLR211C VPS52P39904 641 aa3.34□□□□□ -1.87
ATG38YLR211C YTA12P40341 825 aa3.34□□□□□ -1.87
ATG38YLR211C YJL213WP40896 331 aa3.34□□□□□ -1.87
ATG38YLR211C DIA3P52290 468 aa3.34□□□□□ -1.87
ATG38YLR211C SMM1P53720 384 aaKnown RBP3.34□□□□□ -1.87
ATG38YLR211C RHO4Q00246 291 aa3.34□□□□□ -1.87
ATG38YLR211C VIP1Q06685 1146 aaKnown RBP3.34□□□□□ -1.87
ATG38YLR211C CDC45Q08032 650 aa3.34□□□□□ -1.87
ATG38YLR211C YPL272CQ08984 517 aa3.34□□□□□ -1.87
ATG38YLR211C LEU9Q12166 604 aaKnown RBP3.34□□□□□ -1.87
ATG38YLR211C CBS2P14905 389 aa3.33□□□□□ -1.88
ATG38YLR211C SEC62P21825 274 aa3.33□□□□□ -1.88
ATG38YLR211C YCR022CP25620 114 aa3.33□□□□□ -1.88
ATG38YLR211C CMK1P27466 446 aaKnown RBP3.33□□□□□ -1.88
ATG38YLR211C SPC110P32380 944 aa3.33□□□□□ -1.88
ATG38YLR211C RRP3P38712 501 aaKnown RBP3.33□□□□□ -1.88
ATG38YLR211C DRN1P53255 507 aaKnown RBP3.33□□□□□ -1.88
ATG38YLR211C YMR160WQ03823 816 aa3.33□□□□□ -1.88
ATG38YLR211C AYT1Q12226 474 aa3.33□□□□□ -1.88
ATG38YLR211C SET6Q12529 373 aa3.33□□□□□ -1.88
ATG38YLR211C CYB2P00175 591 aa3.32□□□□□ -1.88
ATG38YLR211C HEM2P05373 342 aa3.32□□□□□ -1.88
ATG38YLR211C AMD1P15274 810 aaKnown RBP3.32□□□□□ -1.88
ATG38YLR211C VPS17P32913 551 aa3.32□□□□□ -1.88
ATG38YLR211C MTC4P38335 694 aaKnown RBP3.32□□□□□ -1.88
ATG38YLR211C TIF5P38431 405 aaKnown RBP3.32□□□□□ -1.88
ATG38YLR211C SPG5P42933 373 aa3.32□□□□□ -1.88
ATG38YLR211C BUD32P53323 261 aa3.32□□□□□ -1.88
ATG38YLR211C RLI1Q03195 608 aaKnown RBP3.32□□□□□ -1.88
ATG38YLR211C ATG16Q03818 150 aa3.32□□□□□ -1.88
ATG38YLR211C NCE102Q12207 173 aaRIP-Chip data3.32□□□□□ -1.88not detected
ATG38YLR211C BUD5P25300 642 aaPredicted RBP3.31□□□□□ -1.88
ATG38YLR211C ADH7P25377 361 aa3.31□□□□□ -1.88
ATG38YLR211C MRS6P32864 603 aaKnown RBP3.31□□□□□ -1.88
ATG38YLR211C DPB4Q04603 196 aaKnown RBP3.31□□□□□ -1.88
ATG38YLR211C SMA2Q04658 369 aa3.31□□□□□ -1.88
ATG38YLR211C APE1P14904 514 aa3.3□□□□□ -1.88
ATG38YLR211C MTF1P14908 341 aaKnown RBP3.3□□□□□ -1.88
ATG38YLR211C VMA16P23968 213 aa3.3□□□□□ -1.88
ATG38YLR211C PUP3P25451 205 aaKnown RBP3.3□□□□□ -1.88
ATG38YLR211C PTR2P32901 601 aa3.3□□□□□ -1.88
ATG38YLR211C RRN3P36070 627 aa3.3□□□□□ -1.88
ATG38YLR211C NUP133P36161 1157 aa3.3□□□□□ -1.88
ATG38YLR211C OSH3P38713 996 aaKnown RBP3.3□□□□□ -1.88
ATG38YLR211C CSM2P40465 213 aa3.3□□□□□ -1.88
ATG38YLR211C CBK1P53894 756 aa3.3□□□□□ -1.88
ATG38YLR211C EFM6P53970 246 aa3.3□□□□□ -1.88
ATG38YLR211C RAD30Q04049 632 aa3.3□□□□□ -1.88
ATG38YLR211C KAR3P17119 729 aa3.29□□□□□ -1.88
ATG38YLR211C YBL055CP34220 418 aaPredicted RBP3.29□□□□□ -1.88
ATG38YLR211C YKL100CP34248 587 aa3.29□□□□□ -1.88
ATG38YLR211C MAL33P38157 468 aa3.29□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 12 ms