RNA–Protein interactions for RNA: YLR196W

PWP1, Transcript of Protein with WD-40 repeats involved in rRNA processing, yeast

Gene PWP1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PWP1	YLR196W	SOK1	P40317	901 aa		5.2	□□□□□ -1.58
PWP1	YLR196W	INP51	P40559	946 aa	Known RBP	5.2	□□□□□ -1.58
PWP1	YLR196W	FMP32	P43557	207 aa		5.2	□□□□□ -1.58
PWP1	YLR196W	UBP6	P43593	499 aa	Known RBP	5.2	□□□□□ -1.58
PWP1	YLR196W	COG1	P53079	417 aa		5.2	□□□□□ -1.58
PWP1	YLR196W	RPT4	P53549	437 aa	Known RBP	5.2	□□□□□ -1.58
PWP1	YLR196W	YNR068C	P53754	272 aa		5.2	□□□□□ -1.58
PWP1	YLR196W	GPN3	Q06543	272 aa		5.2	□□□□□ -1.58
PWP1	YLR196W	KEL3	Q08979	651 aa	Predicted RBP	5.2	□□□□□ -1.58
PWP1	YLR196W	FAL1	Q12099	399 aa	Known RBP	5.2	□□□□□ -1.58
PWP1	YLR196W	MTR10	Q99189	972 aa		5.2	□□□□□ -1.58
PWP1	YLR196W	SST2	P11972	698 aa	Known RBP	5.2	□□□□□ -1.58
PWP1	YLR196W	CBF1	P17106	351 aa		5.2	□□□□□ -1.58
PWP1	YLR196W	KGD1	P20967	1014 aa	Known RBP	5.2	□□□□□ -1.58
PWP1	YLR196W	RNA15	P25299	296 aa	Predicted RBP	5.2	□□□□□ -1.58
PWP1	YLR196W	CPR4	P25334	318 aa		5.2	□□□□□ -1.58
PWP1	YLR196W	RSA4	P25382	515 aa	Known RBP	5.2	□□□□□ -1.58
PWP1	YLR196W	GSP1	P32835	219 aa	Known RBP	5.2	□□□□□ -1.58
PWP1	YLR196W	GSP2	P32836	220 aa	Known RBP	5.2	□□□□□ -1.58
PWP1	YLR196W	SER1	P33330	395 aa	Known RBP	5.2	□□□□□ -1.58
PWP1	YLR196W	CDS1	P38221	457 aa		5.2	□□□□□ -1.58
PWP1	YLR196W	ERG7	P38604	731 aa		5.2	□□□□□ -1.58
PWP1	YLR196W	VFA1	P40080	203 aa		5.2	□□□□□ -1.58
PWP1	YLR196W	RGI2	P40188	164 aa		5.2	□□□□□ -1.58
PWP1	YLR196W	KHA1	P40309	873 aa		5.2	□□□□□ -1.58
PWP1	YLR196W	CSM2	P40465	213 aa		5.2	□□□□□ -1.58
PWP1	YLR196W	VHR1	P40522	640 aa		5.2	□□□□□ -1.58
PWP1	YLR196W	SWP82	P43554	623 aa		5.2	□□□□□ -1.58
PWP1	YLR196W	RPE1	P46969	238 aa		5.2	□□□□□ -1.58
PWP1	YLR196W	MPS3	P47069	682 aa		5.2	□□□□□ -1.58
PWP1	YLR196W	COS6	P53344	381 aa		5.2	□□□□□ -1.58
PWP1	YLR196W	CAF40	P53829	373 aa		5.2	□□□□□ -1.58
PWP1	YLR196W	RPL6A	Q02326	176 aa	Known RBP	5.2	□□□□□ -1.58
PWP1	YLR196W	SKI8	Q02793	397 aa	Predicted RBP	5.2	□□□□□ -1.58
PWP1	YLR196W	SNX41	Q04053	625 aa		5.2	□□□□□ -1.58
PWP1	YLR196W	HFD1	Q04458	532 aa		5.2	□□□□□ -1.58
PWP1	YLR196W	RCO1	Q04779	684 aa		5.2	□□□□□ -1.58
PWP1	YLR196W	GTB1	Q04924	702 aa		5.2	□□□□□ -1.58
PWP1	YLR196W	RQC1	Q05468	723 aa	Known RBP	5.2	□□□□□ -1.58
PWP1	YLR196W	LUC7	Q07508	261 aa	Predicted RBP	5.2	□□□□□ -1.58
PWP1	YLR196W	DIA2	Q08496	732 aa	Predicted RBP	5.2	□□□□□ -1.58
PWP1	YLR196W	CWC2	Q12046	339 aa	Predicted RBP	5.2	□□□□□ -1.58
PWP1	YLR196W	YDL206W	Q12424	762 aa		5.2	□□□□□ -1.58
PWP1	YLR196W	STB3	Q12427	513 aa		5.2	□□□□□ -1.58
PWP1	YLR196W	NBL1	Q3E7Y6	73 aa		5.2	□□□□□ -1.58
PWP1	YLR196W	YOR111W	Q99210	232 aa		5.2	□□□□□ -1.58
PWP1	YLR196W	URA3	P03962	267 aa		5.19	□□□□□ -1.58
PWP1	YLR196W	PPR1	P07272	904 aa	Predicted RBP	5.19	□□□□□ -1.58
PWP1	YLR196W	TCP1	P12612	559 aa	Known RBP	5.19	□□□□□ -1.58
PWP1	YLR196W	GAL3	P13045	520 aa		5.19	□□□□□ -1.58
PWP1	YLR196W	RNR3	P21672	869 aa	Known RBP	5.19	□□□□□ -1.58
PWP1	YLR196W	AAT2	P23542	418 aa	Known RBP	5.19	□□□□□ -1.58
PWP1	YLR196W	GID7	P25569	745 aa		5.19	□□□□□ -1.58
PWP1	YLR196W	RTG1	P32607	177 aa		5.19	□□□□□ -1.58
PWP1	YLR196W	NGR1	P32831	672 aa	Known RBP	5.19	□□□□□ -1.58
PWP1	YLR196W	AST1	P35183	429 aa		5.19	□□□□□ -1.58
PWP1	YLR196W	VMA7	P39111	118 aa		5.19	□□□□□ -1.58
PWP1	YLR196W	GDH3	P39708	457 aa		5.19	□□□□□ -1.58
PWP1	YLR196W	RSP5	P39940	809 aa	Known RBP	5.19	□□□□□ -1.58
PWP1	YLR196W	PAC1	P39946	494 aa	Known RBP	5.19	□□□□□ -1.58
PWP1	YLR196W	PDS1	P40316	373 aa	Predicted RBP	5.19	□□□□□ -1.58
PWP1	YLR196W	GTT1	P40582	234 aa		5.19	□□□□□ -1.58
PWP1	YLR196W	JHD2	P47156	728 aa	Predicted RBP	5.19	□□□□□ -1.58
PWP1	YLR196W	YGL036W	P53185	909 aa	Predicted RBP	5.19	□□□□□ -1.58
PWP1	YLR196W	TUB4	P53378	473 aa		5.19	□□□□□ -1.58
PWP1	YLR196W	RPS15	Q01855	142 aa	Known RBP	5.19	□□□□□ -1.58
PWP1	YLR196W	NHX1	Q04121	633 aa		5.19	□□□□□ -1.58
PWP1	YLR196W	YMR027W	Q04371	470 aa		5.19	□□□□□ -1.58
PWP1	YLR196W	YML083C	Q04526	418 aa		5.19	□□□□□ -1.58
PWP1	YLR196W	SOV1	Q04748	898 aa		5.19	□□□□□ -1.58
PWP1	YLR196W	INM2	Q05533	292 aa		5.19	□□□□□ -1.58
PWP1	YLR196W	GSH2	Q08220	491 aa		5.19	□□□□□ -1.58
PWP1	YLR196W	HRK1	Q08732	759 aa	Known RBP	5.19	□□□□□ -1.58
PWP1	YLR196W	YPL272C	Q08984	517 aa		5.19	□□□□□ -1.58
PWP1	YLR196W	TGS1	Q12052	315 aa		5.19	□□□□□ -1.58
PWP1	YLR196W	LEU9	Q12166	604 aa	Known RBP	5.19	□□□□□ -1.58
PWP1	YLR196W	RPN5	Q12250	445 aa	Known RBP	5.19	□□□□□ -1.58
PWP1	YLR196W	GLO4	Q12320	285 aa		5.19	□□□□□ -1.58
PWP1	YLR196W	DGK1	Q12382	290 aa		5.19	□□□□□ -1.58
PWP1	YLR196W	PMD1	P32634	1753 aa		5.18	□□□□□ -1.58
PWP1	YLR196W	RPS9A	O13516	197 aa	Known RBP	5.18	□□□□□ -1.58
PWP1	YLR196W	RPS9B	P05755	195 aa	Known RBP	5.18	□□□□□ -1.58
PWP1	YLR196W	MET2	P08465	486 aa		5.18	□□□□□ -1.58
PWP1	YLR196W	RGR1	P19263	1082 aa		5.18	□□□□□ -1.58
PWP1	YLR196W	GSY1	P23337	708 aa		5.18	□□□□□ -1.58
PWP1	YLR196W	SED4	P25365	1065 aa		5.18	□□□□□ -1.58
PWP1	YLR196W	ADP1	P25371	1049 aa		5.18	□□□□□ -1.58
PWP1	YLR196W	PDC6	P26263	563 aa	Known RBP	5.18	□□□□□ -1.58
PWP1	YLR196W	TCA17	P32613	152 aa		5.18	□□□□□ -1.58
PWP1	YLR196W	SRP101	P32916	621 aa		5.18	□□□□□ -1.58
PWP1	YLR196W	TAF14	P35189	244 aa		5.18	□□□□□ -1.58
PWP1	YLR196W	STB6	P36085	766 aa		5.18	□□□□□ -1.58
PWP1	YLR196W	PFF1	P38244	976 aa		5.18	□□□□□ -1.58
PWP1	YLR196W	UBS1	P38290	277 aa		5.18	□□□□□ -1.58
PWP1	YLR196W	RRP3	P38712	501 aa	Known RBP	5.18	□□□□□ -1.58
PWP1	YLR196W	UBA4	P38820	440 aa		5.18	□□□□□ -1.58
PWP1	YLR196W	BOL3	P39724	118 aa		5.18	□□□□□ -1.58
PWP1	YLR196W	RPC17	P47076	161 aa		5.18	□□□□□ -1.58
PWP1	YLR196W	IBA57	P47158	497 aa		5.18	□□□□□ -1.58
PWP1	YLR196W	VOA1	P53262	265 aa		5.18	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 26.4 ms