RNA–Protein interactions for RNA: YLR170C

APS1, Transcript of Small subunit of the clathrin-associated adaptor complex AP-1, yeast

Gene APS1, Length 471 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APS1	YLR170C	LIA1	P47120	325 aa	Known RBP	4.69	□□□□□ -1.66
APS1	YLR170C	FAA4	P47912	694 aa	Known RBP	4.69	□□□□□ -1.66
APS1	YLR170C	FRE4	P53746	719 aa		4.69	□□□□□ -1.66
APS1	YLR170C	CCE1	Q03702	353 aa		4.69	□□□□□ -1.66
APS1	YLR170C	FAR8	Q05040	523 aa		4.69	□□□□□ -1.66
APS1	YLR170C	YLR177W	Q06251	628 aa		4.69	□□□□□ -1.66
APS1	YLR170C	YOL019W	Q08157	551 aa		4.69	□□□□□ -1.66
APS1	YLR170C	GNT1	Q12096	491 aa		4.69	□□□□□ -1.66
APS1	YLR170C	GTT2	Q12390	233 aa		4.69	□□□□□ -1.66
APS1	YLR170C	TSC13	Q99190	310 aa		4.69	□□□□□ -1.66
APS1	YLR170C	YKR104W	P0CE69	306 aa		4.68	□□□□□ -1.66
APS1	YLR170C	ABF1	P14164	731 aa		4.68	□□□□□ -1.66
APS1	YLR170C	SRV2	P17555	526 aa	Known RBP	4.68	□□□□□ -1.66
APS1	YLR170C	EPT1	P22140	391 aa		4.68	□□□□□ -1.66
APS1	YLR170C	PUP1	P25043	261 aa		4.68	□□□□□ -1.66
APS1	YLR170C	YCR099C	P25657	155 aa		4.68	□□□□□ -1.66
APS1	YLR170C	BEM1	P29366	551 aa		4.68	□□□□□ -1.66
APS1	YLR170C	MRPL9	P31334	269 aa		4.68	□□□□□ -1.66
APS1	YLR170C	PFS1	P38872	237 aa		4.68	□□□□□ -1.66
APS1	YLR170C	BAT1	P38891	393 aa	Known RBP	4.68	□□□□□ -1.66
APS1	YLR170C	PCF11	P39081	626 aa	Predicted RBP	4.68	□□□□□ -1.66
APS1	YLR170C	CIN4	P39110	191 aa		4.68	□□□□□ -1.66
APS1	YLR170C	PEP8	P40335	379 aa		4.68	□□□□□ -1.66
APS1	YLR170C	QDR2	P40474	542 aa		4.68	□□□□□ -1.66
APS1	YLR170C	GAT1	P43574	510 aa		4.68	□□□□□ -1.66
APS1	YLR170C	COQ5	P49017	307 aa		4.68	□□□□□ -1.66
APS1	YLR170C	PAN2	P53010	1115 aa	Predicted RBP	4.68	□□□□□ -1.66
APS1	YLR170C	NPY1	P53164	384 aa		4.68	□□□□□ -1.66
APS1	YLR170C	SWC4	P53201	476 aa		4.68	□□□□□ -1.66
APS1	YLR170C	BIO4	P53630	237 aa		4.68	□□□□□ -1.66
APS1	YLR170C	AQR1	P53943	586 aa		4.68	□□□□□ -1.66
APS1	YLR170C	VAC7	P53950	1165 aa		4.68	□□□□□ -1.66
APS1	YLR170C	SPO20	Q04359	397 aa		4.68	□□□□□ -1.66
APS1	YLR170C	YML053C	Q04978	212 aa		4.68	□□□□□ -1.66
APS1	YLR170C	HEL2	Q05580	639 aa	Known RBP	4.68	□□□□□ -1.66
APS1	YLR170C	VPS68	Q12016	184 aa		4.68	□□□□□ -1.66
APS1	YLR170C	NUS1	Q12063	375 aa		4.68	□□□□□ -1.66
APS1	YLR170C	RGS2	Q99188	309 aa		4.68	□□□□□ -1.66
APS1	YLR170C	FAB1	P34756	2278 aa		4.67	□□□□□ -1.66
APS1	YLR170C	PHO5	P00635	467 aa		4.67	□□□□□ -1.66
APS1	YLR170C	SUC2	P00724	532 aa		4.67	□□□□□ -1.66
APS1	YLR170C	VAN1	P23642	535 aa		4.67	□□□□□ -1.66
APS1	YLR170C	SEC14	P24280	304 aa	Known RBP	4.67	□□□□□ -1.66
APS1	YLR170C	SNT1	P25357	1226 aa		4.67	□□□□□ -1.66
APS1	YLR170C	RML2	P32611	393 aa		4.67	□□□□□ -1.66
APS1	YLR170C	TIP20	P33891	701 aa		4.67	□□□□□ -1.66
APS1	YLR170C	YPT52	P36018	234 aa	Known RBP	4.67	□□□□□ -1.66
APS1	YLR170C	SRX1	P36077	127 aa		4.67	□□□□□ -1.66
APS1	YLR170C	TCD2	P36101	447 aa	Known RBP	4.67	□□□□□ -1.66
APS1	YLR170C	GMH1	P36125	273 aa		4.67	□□□□□ -1.66
APS1	YLR170C	YBR259W	P38338	688 aa		4.67	□□□□□ -1.66
APS1	YLR170C	YHR020W	P38708	688 aa	Known RBP	4.67	□□□□□ -1.66
APS1	YLR170C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.67	□□□□□ -1.66	not detected
APS1	YLR170C	PFK26	P40433	827 aa	Known RBP	4.67	□□□□□ -1.66
APS1	YLR170C	YGL108C	P53139	140 aa		4.67	□□□□□ -1.66
APS1	YLR170C	SMA1	Q02651	245 aa		4.67	□□□□□ -1.66
APS1	YLR170C	YML119W	Q03208	357 aa		4.67	□□□□□ -1.66
APS1	YLR170C	YMR209C	Q03648	457 aa		4.67	□□□□□ -1.66
APS1	YLR170C	TAF11	Q04226	346 aa		4.67	□□□□□ -1.66
APS1	YLR170C	MFB1	Q04922	465 aa		4.67	□□□□□ -1.66
APS1	YLR170C	OPI10	Q08202	246 aa		4.67	□□□□□ -1.66
APS1	YLR170C	YLR053C	Q12026	108 aa		4.67	□□□□□ -1.66
APS1	YLR170C	MRH1	Q12117	320 aa	Predicted RBP	4.67	□□□□□ -1.66
APS1	YLR170C	ICT1	Q12385	394 aa		4.67	□□□□□ -1.66
APS1	YLR170C	NAG1	Q8TGN9	163 aa		4.67	□□□□□ -1.66
APS1	YLR170C	CPA1	P07258	411 aa	Known RBP	4.66	□□□□□ -1.66
APS1	YLR170C	NSP1	P14907	823 aa	Known RBP	4.66	□□□□□ -1.66
APS1	YLR170C	VPS34	P22543	875 aa		4.66	□□□□□ -1.66
APS1	YLR170C	AAD3	P25612	363 aa		4.66	□□□□□ -1.66
APS1	YLR170C	MCM5	P29496	775 aa	Known RBP	4.66	□□□□□ -1.66
APS1	YLR170C	PHA2	P32452	334 aa		4.66	□□□□□ -1.66
APS1	YLR170C	NIP1	P32497	812 aa	Known RBP	4.66	□□□□□ -1.66
APS1	YLR170C	PRP18	P33411	251 aa	Predicted RBP	4.66	□□□□□ -1.66
APS1	YLR170C	MRPL37	P36532	105 aa		4.66	□□□□□ -1.66
APS1	YLR170C	YHR045W	P38775	560 aa		4.66	□□□□□ -1.66
APS1	YLR170C	CYC2	P38909	366 aa		4.66	□□□□□ -1.66
APS1	YLR170C	OAF1	P39720	1047 aa	Predicted RBP	4.66	□□□□□ -1.66
APS1	YLR170C	YFR018C	P43599	363 aa		4.66	□□□□□ -1.66
APS1	YLR170C	NBP35	P52920	328 aa		4.66	□□□□□ -1.66
APS1	YLR170C	BOL2	P53082	120 aa		4.66	□□□□□ -1.66
APS1	YLR170C	ZRG17	P53735	605 aa		4.66	□□□□□ -1.66
APS1	YLR170C	IST1	P53843	298 aa	Predicted RBP	4.66	□□□□□ -1.66
APS1	YLR170C	RNY1	Q02933	434 aa	Known RBP	4.66	□□□□□ -1.66
APS1	YLR170C	RPN9	Q04062	393 aa	Known RBP	4.66	□□□□□ -1.66
APS1	YLR170C	YDL121C	Q07541	149 aa		4.66	□□□□□ -1.66
APS1	YLR170C	ATG10	Q07879	167 aa		4.66	□□□□□ -1.66
APS1	YLR170C	PLB3	Q08108	686 aa		4.66	□□□□□ -1.66
APS1	YLR170C	VHS3	Q08438	674 aa		4.66	□□□□□ -1.66
APS1	YLR170C	RUD3	Q12234	484 aa	Known RBP	4.66	□□□□□ -1.66
APS1	YLR170C	SPE4	Q12455	300 aa		4.66	□□□□□ -1.66
APS1	YLR170C	NOT5	Q12514	560 aa	Predicted RBP	4.66	□□□□□ -1.66
APS1	YLR170C	SPS1	P08458	490 aa		4.65	□□□□□ -1.67
APS1	YLR170C	GCD1	P09032	578 aa	Predicted RBP	4.65	□□□□□ -1.67
APS1	YLR170C	TUB1	P09733	447 aa	Known RBP	4.65	□□□□□ -1.67
APS1	YLR170C	MET8	P15807	274 aa		4.65	□□□□□ -1.67
APS1	YLR170C	SCL1	P21243	252 aa	Known RBP	4.65	□□□□□ -1.67
APS1	YLR170C	MSB1	P21339	1137 aa	Known RBP	4.65	□□□□□ -1.67
APS1	YLR170C	GAS1	P22146	559 aa	Known RBP	4.65	□□□□□ -1.67
APS1	YLR170C	CDC10	P25342	322 aa	Known RBP	4.65	□□□□□ -1.67
APS1	YLR170C	RRP14	P36080	434 aa	Known RBP	4.65	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 27.9 ms