RNA–Protein interactions for RNA: YLL011W

SOF1, Transcript of Protein required for biogenesis of 40S (small) ribosomal subunit, yeastyeast

Gene SOF1, Length 1,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOF1YLL011W RAD33Q04231 177 aa4.45□□□□□ -1.7
SOF1YLL011W NOP6Q07623 225 aaKnown RBP4.45□□□□□ -1.7
SOF1YLL011W UAF30Q08747 228 aa4.45□□□□□ -1.7
SOF1YLL011W YOR352WQ08816 343 aa4.45□□□□□ -1.7
SOF1YLL011W VMR1P38735 1592 aa4.44□□□□□ -1.7
SOF1YLL011W MRP13P12686 339 aa4.44□□□□□ -1.7
SOF1YLL011W CLC1P17891 233 aa4.44□□□□□ -1.7
SOF1YLL011W RML2P32611 393 aa4.44□□□□□ -1.7
SOF1YLL011W SEC66P33754 206 aa4.44□□□□□ -1.7
SOF1YLL011W HCS1P34243 683 aa4.44□□□□□ -1.7
SOF1YLL011W SEC31P38968 1273 aaKnown RBP4.44□□□□□ -1.7
SOF1YLL011W ALG5P40350 334 aa4.44□□□□□ -1.7
SOF1YLL011W MSE1P48525 536 aa4.44□□□□□ -1.7
SOF1YLL011W CUE3P53137 624 aaKnown RBP4.44□□□□□ -1.7
SOF1YLL011W SPC98P53540 846 aa4.44□□□□□ -1.7
SOF1YLL011W YLR122CQ12312 125 aa4.44□□□□□ -1.7
SOF1YLL011W NUP188P52593 1655 aaKnown RBP4.44□□□□□ -1.7
SOF1YLL011W RPL6BP05739 176 aaKnown RBP4.43□□□□□ -1.7
SOF1YLL011W HIP1P06775 603 aa4.43□□□□□ -1.7
SOF1YLL011W OM45P16547 393 aa4.43□□□□□ -1.7
SOF1YLL011W PPH22P23595 377 aa4.43□□□□□ -1.7
SOF1YLL011W YSP3P25036 478 aa4.43□□□□□ -1.7
SOF1YLL011W IME2P32581 645 aa4.43□□□□□ -1.7
SOF1YLL011W NTR2P36118 322 aaPredicted RBP4.43□□□□□ -1.7
SOF1YLL011W FUN12P39730 1002 aaKnown RBP4.43□□□□□ -1.7
SOF1YLL011W YIL089WP40500 205 aa4.43□□□□□ -1.7
SOF1YLL011W CHS6P40955 746 aa4.43□□□□□ -1.7
SOF1YLL011W SMC3P47037 1230 aa4.43□□□□□ -1.7
SOF1YLL011W YGR130CP53278 816 aa4.43□□□□□ -1.7
SOF1YLL011W RPL6AQ02326 176 aaKnown RBP4.43□□□□□ -1.7
SOF1YLL011W PPM1Q04081 328 aa4.43□□□□□ -1.7
SOF1YLL011W MGR3Q04472 501 aa4.43□□□□□ -1.7
SOF1YLL011W YLH47Q06493 454 aa4.43□□□□□ -1.7
SOF1YLL011W NOP12Q08208 459 aaKnown RBP4.43□□□□□ -1.7
SOF1YLL011W YDL176WQ12027 708 aa4.43□□□□□ -1.7
SOF1YLL011W LEU9Q12166 604 aaKnown RBP4.43□□□□□ -1.7
SOF1YLL011W YDR215CQ12240 137 aa4.43□□□□□ -1.7
SOF1YLL011W YDL177CQ12257 170 aa4.43□□□□□ -1.7
SOF1YLL011W SRB8P25648 1427 aa4.43□□□□□ -1.7
SOF1YLL011W COX1P00401 534 aa4.43□□□□□ -1.7
SOF1YLL011W KGD1P20967 1014 aaKnown RBP4.43□□□□□ -1.7
SOF1YLL011W CDC5P32562 705 aa4.43□□□□□ -1.7
SOF1YLL011W SIP1P32578 815 aa4.43□□□□□ -1.7
SOF1YLL011W SSE2P32590 693 aaKnown RBP4.43□□□□□ -1.7
SOF1YLL011W VPS17P32913 551 aa4.43□□□□□ -1.7
SOF1YLL011W TUL1P36096 758 aa4.43□□□□□ -1.7
SOF1YLL011W CTP1P38152 299 aa4.43□□□□□ -1.7
SOF1YLL011W YHR131CP38835 850 aa4.43□□□□□ -1.7
SOF1YLL011W PLB1P39105 664 aa4.43□□□□□ -1.7
SOF1YLL011W SER3P40054 469 aa4.43□□□□□ -1.7
SOF1YLL011W SEC27P41811 889 aaKnown RBP4.43□□□□□ -1.7
SOF1YLL011W AIP1P46680 615 aaKnown RBP4.43□□□□□ -1.7
SOF1YLL011W NPA3P47122 385 aa4.43□□□□□ -1.7
SOF1YLL011W MUP1P50276 574 aa4.43□□□□□ -1.7
SOF1YLL011W DIA3P52290 468 aa4.43□□□□□ -1.7
SOF1YLL011W PAN2P53010 1115 aaPredicted RBP4.43□□□□□ -1.7
SOF1YLL011W MLC1P53141 149 aa4.43□□□□□ -1.7
SOF1YLL011W YGR035CP53222 116 aa4.43□□□□□ -1.7
SOF1YLL011W ERG5P54781 538 aa4.43□□□□□ -1.7
SOF1YLL011W MFM1Q02783 413 aa4.43□□□□□ -1.7
SOF1YLL011W RNH1Q04740 348 aa4.43□□□□□ -1.7
SOF1YLL011W DUS4Q06063 367 aa4.43□□□□□ -1.7
SOF1YLL011W MRI1Q06489 411 aaKnown RBP4.43□□□□□ -1.7
SOF1YLL011W THI72Q08579 599 aa4.43□□□□□ -1.7
SOF1YLL011W SEC39Q12745 709 aa4.43□□□□□ -1.7
SOF1YLL011W AI5_ALPHAQ9ZZX1 630 aa4.43□□□□□ -1.7
SOF1YLL011W DBP3P20447 523 aaKnown RBP4.42□□□□□ -1.7
SOF1YLL011W PRD1P25375 712 aa4.42□□□□□ -1.7
SOF1YLL011W UGP1P32861 499 aaKnown RBP4.42□□□□□ -1.7
SOF1YLL011W NIP100P33420 868 aa4.42□□□□□ -1.7
SOF1YLL011W SRB2P34162 210 aa4.42□□□□□ -1.7
SOF1YLL011W YBR053CP38235 358 aa4.42□□□□□ -1.7
SOF1YLL011W ELO3P40319 345 aa4.42□□□□□ -1.7
SOF1YLL011W UBX6P47049 396 aa4.42□□□□□ -1.7
SOF1YLL011W AMA1P50082 593 aa4.42□□□□□ -1.7
SOF1YLL011W YNL144CP53907 740 aa4.42□□□□□ -1.7
SOF1YLL011W ORC3P54790 616 aa4.42□□□□□ -1.7
SOF1YLL011W FIN1Q03898 291 aa4.42□□□□□ -1.7
SOF1YLL011W PDS5Q04264 1277 aa4.42□□□□□ -1.7
SOF1YLL011W YDR109CQ04585 715 aa4.42□□□□□ -1.7
SOF1YLL011W ARG7Q04728 441 aa4.42□□□□□ -1.7
SOF1YLL011W RXT3Q07458 294 aa4.42□□□□□ -1.7
SOF1YLL011W SIL1Q08199 421 aa4.42□□□□□ -1.7
SOF1YLL011W FRE3Q08905 711 aa4.42□□□□□ -1.7
SOF1YLL011W UBX3Q12229 455 aa4.42□□□□□ -1.7
SOF1YLL011W TFB5Q3E7C1 72 aaPredicted RBP4.42□□□□□ -1.7
SOF1YLL011W CYC7P00045 113 aa4.41□□□□□ -1.7
SOF1YLL011W YPK1P12688 680 aaKnown RBP4.41□□□□□ -1.7
SOF1YLL011W ADH7P25377 361 aa4.41□□□□□ -1.7
SOF1YLL011W FUB1P25659 250 aa4.41□□□□□ -1.7
SOF1YLL011W CDC20P26309 610 aa4.41□□□□□ -1.7
SOF1YLL011W PHO91P27514 894 aa4.41□□□□□ -1.7
SOF1YLL011W IDH2P28241 369 aaKnown RBP4.41□□□□□ -1.7
SOF1YLL011W YDR089WP38966 869 aa4.41□□□□□ -1.7
SOF1YLL011W MEF2P39677 819 aa4.41□□□□□ -1.7
SOF1YLL011W MKT1P40850 830 aaKnown RBP4.41□□□□□ -1.7
SOF1YLL011W STB2P46679 850 aa4.41□□□□□ -1.7
SOF1YLL011W YGR149WP48236 432 aa4.41□□□□□ -1.7
SOF1YLL011W APT1P49435 187 aaKnown RBP4.41□□□□□ -1.7
SOF1YLL011W FMS1P50264 508 aa4.41□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms