RNA–Protein interactions for RNA: YKL027W

TCD2, Transcript of tRNA threonylcarbamoyladenosine dehydratase, yeast

Gene TCD2, Length 1,344 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TCD2	YKL027W	UTP18	P40362	594 aa	Predicted RBP	11.47	□□□□□ -0.57
TCD2	YKL027W	SHY1	P53266	389 aa		11.47	□□□□□ -0.57
TCD2	YKL027W	LSM3	P57743	89 aa	Known RBP	11.47	□□□□□ -0.57
TCD2	YKL027W	BCH1	Q05029	724 aa		11.47	□□□□□ -0.57
TCD2	YKL027W	RPN8	Q08723	338 aa	Known RBP	11.47	□□□□□ -0.57
TCD2	YKL027W	AHA1	Q12449	350 aa	Known RBP	11.47	□□□□□ -0.57
TCD2	YKL027W	MET8	P15807	274 aa		11.46	□□□□□ -0.57
TCD2	YKL027W	SEC15	P22224	910 aa		11.46	□□□□□ -0.57
TCD2	YKL027W	RPC19	P28000	142 aa	Known RBP	11.46	□□□□□ -0.57
TCD2	YKL027W	SPR1	P32603	445 aa		11.46	□□□□□ -0.57
TCD2	YKL027W	TFB1	P32776	642 aa		11.46	□□□□□ -0.57
TCD2	YKL027W	YDR089W	P38966	869 aa		11.46	□□□□□ -0.57
TCD2	YKL027W	YEL073C	P39974	107 aa		11.46	□□□□□ -0.57
TCD2	YKL027W	GIM4	P40005	111 aa	Known RBP	11.46	□□□□□ -0.57
TCD2	YKL027W	YER034W	P40022	185 aa	Known RBP	11.46	□□□□□ -0.57
TCD2	YKL027W	COA1	P40452	197 aa		11.46	□□□□□ -0.57
TCD2	YKL027W	PRM2	P40534	656 aa		11.46	□□□□□ -0.57
TCD2	YKL027W	MNN10	P50108	393 aa	Known RBP	11.46	□□□□□ -0.57
TCD2	YKL027W	SLM2	P53955	656 aa		11.46	□□□□□ -0.57
TCD2	YKL027W	HDA3	Q06623	655 aa		11.46	□□□□□ -0.57
TCD2	YKL027W	ENT4	Q07872	247 aa		11.46	□□□□□ -0.57
TCD2	YKL027W	RTT10	Q08924	1013 aa		11.46	□□□□□ -0.57
TCD2	YKL027W	ATP11	P32453	318 aa		11.45	□□□□□ -0.58
TCD2	YKL027W	NIP1	P32497	812 aa	Known RBP	11.45	□□□□□ -0.58
TCD2	YKL027W	PTH2	P34222	208 aa		11.45	□□□□□ -0.58
TCD2	YKL027W	NUP120	P35729	1037 aa		11.45	□□□□□ -0.58
TCD2	YKL027W	MUM2	P38236	366 aa		11.45	□□□□□ -0.58
TCD2	YKL027W	UTP9	P38882	575 aa	Known RBP	11.45	□□□□□ -0.58
TCD2	YKL027W	NPT1	P39683	429 aa	Known RBP	11.45	□□□□□ -0.58
TCD2	YKL027W	SPF1	P39986	1215 aa	Known RBP	11.45	□□□□□ -0.58
TCD2	YKL027W	YRB1	P41920	201 aa	Known RBP	11.45	□□□□□ -0.58
TCD2	YKL027W	TFB4	Q12004	338 aa		11.45	□□□□□ -0.58
TCD2	YKL027W	YPT6	Q99260	215 aa		11.45	□□□□□ -0.58
TCD2	YKL027W	CLB1	P24868	471 aa		11.44	□□□□□ -0.58
TCD2	YKL027W	TIS11	P47977	285 aa		11.44	□□□□□ -0.58
TCD2	YKL027W	HST3	P53687	447 aa		11.44	□□□□□ -0.58
TCD2	YKL027W	MRS2	Q01926	470 aa		11.44	□□□□□ -0.58
TCD2	YKL027W	STB3	Q12427	513 aa		11.44	□□□□□ -0.58
TCD2	YKL027W	CDC21	P06785	304 aa		11.43	□□□□□ -0.58
TCD2	YKL027W	SCL1	P21243	252 aa	Known RBP	11.43	□□□□□ -0.58
TCD2	YKL027W	CTP1	P38152	299 aa		11.43	□□□□□ -0.58
TCD2	YKL027W	UBP14	P38237	781 aa	Known RBP	11.43	□□□□□ -0.58
TCD2	YKL027W	GIC1	P38785	314 aa		11.43	□□□□□ -0.58
TCD2	YKL027W	BZZ1	P38822	633 aa		11.43	□□□□□ -0.58
TCD2	YKL027W	SEC31	P38968	1273 aa	Known RBP	11.43	□□□□□ -0.58
TCD2	YKL027W	MRM2	P53123	320 aa		11.43	□□□□□ -0.58
TCD2	YKL027W	MPS2	P53159	387 aa		11.43	□□□□□ -0.58
TCD2	YKL027W	YPL109C	Q02981	657 aa		11.43	□□□□□ -0.58
TCD2	YKL027W	VPS16	Q03308	798 aa		11.43	□□□□□ -0.58
TCD2	YKL027W	YFT2	Q06676	274 aa		11.43	□□□□□ -0.58
TCD2	YKL027W	NOB1	Q08444	459 aa	Known RBP	11.43	□□□□□ -0.58
TCD2	YKL027W	FUM1	P08417	488 aa	Known RBP	11.42	□□□□□ -0.58
TCD2	YKL027W	CRM1	P30822	1084 aa	Known RBP	11.42	□□□□□ -0.58
TCD2	YKL027W	UBA4	P38820	440 aa		11.42	□□□□□ -0.58
TCD2	YKL027W	EMP65	P40085	556 aa		11.42	□□□□□ -0.58
TCD2	YKL027W	YIL108W	P40483	696 aa	Known RBP	11.42	□□□□□ -0.58
TCD2	YKL027W	GTR2	P53290	341 aa		11.42	□□□□□ -0.58
TCD2	YKL027W	SWS2	P53937	143 aa		11.42	□□□□□ -0.58
TCD2	YKL027W	YML131W	Q03102	365 aa		11.42	□□□□□ -0.58
TCD2	YKL027W	TRM82	Q03774	444 aa		11.42	□□□□□ -0.58
TCD2	YKL027W	RIF2	Q06208	395 aa		11.42	□□□□□ -0.58
TCD2	YKL027W	YDL121C	Q07541	149 aa		11.42	□□□□□ -0.58
TCD2	YKL027W	PST1	Q12355	444 aa		11.42	□□□□□ -0.58
TCD2	YKL027W	ART10	P18634	518 aa	Known RBP	11.41	□□□□□ -0.58
TCD2	YKL027W	SHU2	P38957	223 aa		11.41	□□□□□ -0.58
TCD2	YKL027W	MRX1	P40050	688 aa		11.41	□□□□□ -0.58
TCD2	YKL027W	PFA3	P42836	336 aa		11.41	□□□□□ -0.58
TCD2	YKL027W	YGR015C	P53208	328 aa		11.41	□□□□□ -0.58
TCD2	YKL027W	YDL129W	Q07555	291 aa		11.41	□□□□□ -0.58
TCD2	YKL027W	RRP42	Q12277	265 aa	Predicted RBP	11.41	□□□□□ -0.58
TCD2	YKL027W	MDM35	O60200	86 aa		11.4	□□□□□ -0.58
TCD2	YKL027W	CLN2	P20438	545 aa		11.4	□□□□□ -0.58
TCD2	YKL027W	BAS1	P22035	811 aa		11.4	□□□□□ -0.58
TCD2	YKL027W	YCK2	P23292	546 aa	Known RBP	11.4	□□□□□ -0.58
TCD2	YKL027W	COX13	P32799	129 aa		11.4	□□□□□ -0.58
TCD2	YKL027W	RPS1A	P33442	255 aa	Known RBP	11.4	□□□□□ -0.58
TCD2	YKL027W	MRPL37	P36532	105 aa		11.4	□□□□□ -0.58
TCD2	YKL027W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	11.4	□□□□□ -0.58	not detected
TCD2	YKL027W	RIM11	P38615	370 aa		11.4	□□□□□ -0.58
TCD2	YKL027W	DED81	P38707	554 aa	Known RBP	11.4	□□□□□ -0.58
TCD2	YKL027W	YHR127W	P38833	243 aa	Known RBP	11.4	□□□□□ -0.58
TCD2	YKL027W	VMA13	P41807	478 aa	Known RBP	11.4	□□□□□ -0.58
TCD2	YKL027W	NUP85	P46673	744 aa		11.4	□□□□□ -0.58
TCD2	YKL027W	YJR149W	P47177	404 aa		11.4	□□□□□ -0.58
TCD2	YKL027W	MDM34	P53083	459 aa		11.4	□□□□□ -0.58
TCD2	YKL027W	NOP19	P53317	196 aa	Predicted RBP	11.4	□□□□□ -0.58
TCD2	YKL027W	SUB1	P54000	292 aa	Known RBP	11.4	□□□□□ -0.58
TCD2	YKL027W	ATG34	Q12292	412 aa		11.4	□□□□□ -0.58
TCD2	YKL027W	HSH49	Q99181	213 aa	Predicted RBP	11.4	□□□□□ -0.58
TCD2	YKL027W	STE3	P06783	470 aa		11.39	□□□□□ -0.59
TCD2	YKL027W	SPT3	P06844	337 aa		11.39	□□□□□ -0.59
TCD2	YKL027W	GUK1	P15454	187 aa	Known RBP	11.39	□□□□□ -0.59
TCD2	YKL027W	ERG6	P25087	383 aa	Known RBP	11.39	□□□□□ -0.59
TCD2	YKL027W	DEF1	P35732	738 aa	Known RBP	11.39	□□□□□ -0.59
TCD2	YKL027W	EAP1	P36041	632 aa	Known RBP	11.39	□□□□□ -0.59
TCD2	YKL027W	SOL2	P37262	315 aa		11.39	□□□□□ -0.59
TCD2	YKL027W	DMA1	P38823	416 aa		11.39	□□□□□ -0.59
TCD2	YKL027W	UBP6	P43593	499 aa	Known RBP	11.39	□□□□□ -0.59
TCD2	YKL027W	STB2	P46679	850 aa		11.39	□□□□□ -0.59
TCD2	YKL027W	ECM9	Q02202	377 aa		11.39	□□□□□ -0.59

Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms