RNA–Protein interactions for RNA: YJR040W

GEF1, Transcript of Voltage-gated chloride channel, yeastyeast

Gene GEF1, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GEF1YJR040W LOT6Q07923 191 aa6.3□□□□□ -1.4
GEF1YJR040W YLR031WQ07978 186 aa6.3□□□□□ -1.4
GEF1YJR040W DDC1Q08949 612 aa6.3□□□□□ -1.4
GEF1YJR040W CTR86P25355 563 aa6.3□□□□□ -1.4
GEF1YJR040W HRR25P29295 494 aaKnown RBP6.3□□□□□ -1.4
GEF1YJR040W SRP101P32916 621 aa6.3□□□□□ -1.4
GEF1YJR040W ASK1P35734 292 aa6.3□□□□□ -1.4
GEF1YJR040W RDH54P38086 958 aa6.3□□□□□ -1.4
GEF1YJR040W FUI1P38196 639 aa6.3□□□□□ -1.4
GEF1YJR040W YBR053CP38235 358 aa6.3□□□□□ -1.4
GEF1YJR040W GRE3P38715 327 aaKnown RBP RIP-Chip data6.3□□□□□ -1.4not detected
GEF1YJR040W MND2P40577 368 aa6.3□□□□□ -1.4
GEF1YJR040W IML2P47031 731 aa6.3□□□□□ -1.4
GEF1YJR040W SSN8P47821 323 aa6.3□□□□□ -1.4
GEF1YJR040W MRX6P48564 524 aa6.3□□□□□ -1.4
GEF1YJR040W DBP6P53734 629 aaKnown RBP6.3□□□□□ -1.4
GEF1YJR040W IPI3P53877 555 aa6.3□□□□□ -1.4
GEF1YJR040W COG5P53951 403 aa6.3□□□□□ -1.4
GEF1YJR040W MRPL13Q02204 264 aa6.3□□□□□ -1.4
GEF1YJR040W YMR099CQ03161 297 aaKnown RBP6.3□□□□□ -1.4
GEF1YJR040W DYN3Q04949 312 aa6.3□□□□□ -1.4
GEF1YJR040W DXO1Q06349 442 aa6.3□□□□□ -1.4
GEF1YJR040W YPR196WQ06595 470 aa6.3□□□□□ -1.4
GEF1YJR040W REH1Q06709 432 aa6.3□□□□□ -1.4
GEF1YJR040W AAD4Q07747 329 aa6.3□□□□□ -1.4
GEF1YJR040W RAX1Q08760 435 aa6.3□□□□□ -1.4
GEF1YJR040W PSY3Q12318 242 aa6.3□□□□□ -1.4
GEF1YJR040W IZH4Q99393 312 aa6.3□□□□□ -1.4
GEF1YJR040W PRC1P00729 532 aa6.29□□□□□ -1.4
GEF1YJR040W RHO2P06781 192 aa6.29□□□□□ -1.4
GEF1YJR040W SPE1P08432 466 aa6.29□□□□□ -1.4
GEF1YJR040W MAS1P10507 462 aa6.29□□□□□ -1.4
GEF1YJR040W SAC1P32368 623 aaKnown RBP6.29□□□□□ -1.4
GEF1YJR040W CYS4P32582 507 aaKnown RBP6.29□□□□□ -1.4
GEF1YJR040W ATG12P38316 186 aa6.29□□□□□ -1.4
GEF1YJR040W TDP1P38319 544 aa6.29□□□□□ -1.4
GEF1YJR040W YHR078WP38799 552 aa6.29□□□□□ -1.4
GEF1YJR040W YJR061WP40355 935 aa6.29□□□□□ -1.4
GEF1YJR040W PRM2P40534 656 aa6.29□□□□□ -1.4
GEF1YJR040W VMA13P41807 478 aaKnown RBP6.29□□□□□ -1.4
GEF1YJR040W CCT7P42943 550 aaKnown RBP6.29□□□□□ -1.4
GEF1YJR040W FET5P43561 622 aa6.29□□□□□ -1.4
GEF1YJR040W BPL1P48445 690 aaPredicted RBP6.29□□□□□ -1.4
GEF1YJR040W NOP19P53317 196 aaPredicted RBP6.29□□□□□ -1.4
GEF1YJR040W YMR155WQ03795 547 aa6.29□□□□□ -1.4
GEF1YJR040W HRD3Q05787 833 aa6.29□□□□□ -1.4
GEF1YJR040W CBC2Q08920 208 aaKnown RBP RIP-Chip data6.29□□□□□ -1.4not detected
GEF1YJR040W MED2Q12124 431 aa6.29□□□□□ -1.4
GEF1YJR040W AHC1Q12433 566 aa6.29□□□□□ -1.4
GEF1YJR040W FMP16Q12497 93 aa6.29□□□□□ -1.4
GEF1YJR040W CMK2P22517 447 aa6.28□□□□□ -1.4
GEF1YJR040W COQ8P27697 501 aa6.28□□□□□ -1.4
GEF1YJR040W DAL1P32375 460 aa6.28□□□□□ -1.4
GEF1YJR040W YKR051WP36142 418 aa6.28□□□□□ -1.4
GEF1YJR040W OTU2P38747 307 aaKnown RBP6.28□□□□□ -1.4
GEF1YJR040W BTT1P40314 149 aaPredicted RBP6.28□□□□□ -1.4
GEF1YJR040W CDC1P40986 491 aa6.28□□□□□ -1.4
GEF1YJR040W VPS9P54787 451 aa6.28□□□□□ -1.4
GEF1YJR040W MTD1Q02046 320 aaKnown RBP6.28□□□□□ -1.4
GEF1YJR040W RSC9Q03124 581 aa6.28□□□□□ -1.4
GEF1YJR040W ECM22Q05958 814 aaPredicted RBP6.28□□□□□ -1.4
GEF1YJR040W ARR2Q06597 130 aa6.28□□□□□ -1.4
GEF1YJR040W PMT7Q06644 662 aa6.28□□□□□ -1.4
GEF1YJR040W ACF2Q12168 779 aa6.28□□□□□ -1.4
GEF1YJR040W UBR2Q07963 1872 aa6.28□□□□□ -1.4
GEF1YJR040W YLR422WQ06409 1932 aa6.28□□□□□ -1.4
GEF1YJR040W NFT1P0CE68 1218 aa6.28□□□□□ -1.4
GEF1YJR040W RAP1P11938 827 aa6.28□□□□□ -1.4
GEF1YJR040W CBS2P14905 389 aa6.28□□□□□ -1.4
GEF1YJR040W GRX2P17695 143 aaKnown RBP6.28□□□□□ -1.4
GEF1YJR040W VMA6P32366 345 aaKnown RBP6.28□□□□□ -1.4
GEF1YJR040W GCD11P32481 527 aaKnown RBP6.28□□□□□ -1.4
GEF1YJR040W SSE2P32590 693 aaKnown RBP6.28□□□□□ -1.4
GEF1YJR040W SLX5P32828 619 aaKnown RBP6.28□□□□□ -1.4
GEF1YJR040W AIM26P32858 118 aa6.28□□□□□ -1.4
GEF1YJR040W ECM13P38195 257 aa6.28□□□□□ -1.4
GEF1YJR040W AIM18P38884 321 aa6.28□□□□□ -1.4
GEF1YJR040W MEF2P39677 819 aa6.28□□□□□ -1.4
GEF1YJR040W FMP10P40098 244 aa6.28□□□□□ -1.4
GEF1YJR040W RRT5P43607 289 aa6.28□□□□□ -1.4
GEF1YJR040W YJL132WP47014 750 aa6.28□□□□□ -1.4
GEF1YJR040W CCT8P47079 568 aaKnown RBP6.28□□□□□ -1.4
GEF1YJR040W ASN2P49090 572 aaKnown RBP6.28□□□□□ -1.4
GEF1YJR040W GET1P53192 235 aa6.28□□□□□ -1.4
GEF1YJR040W PNG1Q02890 363 aa6.28□□□□□ -1.4
GEF1YJR040W COX6P00427 148 aa6.27□□□□□ -1.41
GEF1YJR040W ERG20P08524 352 aaKnown RBP6.27□□□□□ -1.41
GEF1YJR040W ART10P18634 518 aaKnown RBP6.27□□□□□ -1.41
GEF1YJR040W IMP3P32899 183 aaPredicted RBP6.27□□□□□ -1.41
GEF1YJR040W PEX6P33760 1030 aa6.27□□□□□ -1.41
GEF1YJR040W GLY1P37303 387 aaKnown RBP6.27□□□□□ -1.41
GEF1YJR040W YGR210CP42942 411 aa6.27□□□□□ -1.41
GEF1YJR040W LSB6P42951 607 aa6.27□□□□□ -1.41
GEF1YJR040W RTT101P47050 842 aa6.27□□□□□ -1.41
GEF1YJR040W NUP42P49686 430 aaKnown RBP6.27□□□□□ -1.41
GEF1YJR040W AIF1P52923 378 aa6.27□□□□□ -1.41
GEF1YJR040W MRPL50P53724 139 aa6.27□□□□□ -1.41
GEF1YJR040W ARX1Q03862 593 aaKnown RBP6.27□□□□□ -1.41
GEF1YJR040W VPS36Q06696 566 aa6.27□□□□□ -1.41
GEF1YJR040W RSB1Q08417 382 aa6.27□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 51.8 ms