RNA–Protein interactions for RNA: YJR036C

HUL4, Transcript of Protein with similarity to hect domain E3 ubiquitin-protein ligases, yeast

Gene HUL4, Length 2,679 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HUL4	YJR036C	PFF1	P38244	976 aa		4.55	□□□□□ -1.68
HUL4	YJR036C	YBR287W	P38355	427 aa		4.55	□□□□□ -1.68
HUL4	YJR036C	ERC1	P38767	581 aa		4.55	□□□□□ -1.68
HUL4	YJR036C	RTT107	P38850	1070 aa		4.55	□□□□□ -1.68
HUL4	YJR036C	DSN1	P40568	576 aa		4.55	□□□□□ -1.68
HUL4	YJR036C	BUD8	P41698	603 aa		4.55	□□□□□ -1.68
HUL4	YJR036C	TOS3	P43637	560 aa		4.55	□□□□□ -1.68
HUL4	YJR036C	PDR8	Q06149	701 aa		4.55	□□□□□ -1.68
HUL4	YJR036C	VAC14	Q06708	880 aa		4.55	□□□□□ -1.68
HUL4	YJR036C	GPR1	Q12361	961 aa		4.55	□□□□□ -1.68
HUL4	YJR036C	RRP12	Q12754	1228 aa	Known RBP	4.55	□□□□□ -1.68
HUL4	YJR036C	BMH1	P29311	267 aa	Known RBP	4.54	□□□□□ -1.68
HUL4	YJR036C	NDI1	P32340	513 aa		4.54	□□□□□ -1.68
HUL4	YJR036C	IMP3	P32899	183 aa	Predicted RBP	4.54	□□□□□ -1.68
HUL4	YJR036C	KKQ8	P36004	724 aa		4.54	□□□□□ -1.68
HUL4	YJR036C	MRPL36	P36531	177 aa		4.54	□□□□□ -1.68
HUL4	YJR036C	TCD1	P38756	429 aa		4.54	□□□□□ -1.68
HUL4	YJR036C	ZRG8	P40021	1076 aa		4.54	□□□□□ -1.68
HUL4	YJR036C	IST3	P40565	148 aa	Predicted RBP	4.54	□□□□□ -1.68
HUL4	YJR036C	CEP3	P40969	608 aa		4.54	□□□□□ -1.68
HUL4	YJR036C	YFL054C	P43549	646 aa		4.54	□□□□□ -1.68
HUL4	YJR036C	NET1	P47035	1189 aa		4.54	□□□□□ -1.68
HUL4	YJR036C	BIO5	P53744	561 aa	Known RBP	4.54	□□□□□ -1.68
HUL4	YJR036C	HDA1	P53973	706 aa		4.54	□□□□□ -1.68
HUL4	YJR036C	DIA1	P54005	336 aa		4.54	□□□□□ -1.68
HUL4	YJR036C	CTS2	Q06350	511 aa		4.54	□□□□□ -1.68
HUL4	YJR036C	YOL107W	Q12239	342 aa		4.54	□□□□□ -1.68
HUL4	YJR036C	MED4	Q12343	284 aa		4.54	□□□□□ -1.68
HUL4	YJR036C	YPR015C	Q12531	247 aa		4.54	□□□□□ -1.68
HUL4	YJR036C	STE2	D6VTK4	431 aa		4.54	□□□□□ -1.68
HUL4	YJR036C	NUF2	P33895	451 aa		4.54	□□□□□ -1.68
HUL4	YJR036C	GIC1	P38785	314 aa		4.54	□□□□□ -1.68
HUL4	YJR036C	SBE22	P38814	852 aa		4.54	□□□□□ -1.68
HUL4	YJR036C	YER156C	P40093	338 aa	Known RBP	4.54	□□□□□ -1.68
HUL4	YJR036C	NIT3	P49954	291 aa		4.54	□□□□□ -1.68
HUL4	YJR036C	MPS2	P53159	387 aa		4.54	□□□□□ -1.68
HUL4	YJR036C	TAM41	P53230	385 aa		4.54	□□□□□ -1.68
HUL4	YJR036C	YGR126W	P53274	230 aa		4.54	□□□□□ -1.68
HUL4	YJR036C	NCE103	P53615	221 aa		4.54	□□□□□ -1.68
HUL4	YJR036C	DBP6	P53734	629 aa	Known RBP	4.54	□□□□□ -1.68
HUL4	YJR036C	SLT2	Q00772	484 aa		4.54	□□□□□ -1.68
HUL4	YJR036C	GRS2	Q06817	618 aa		4.54	□□□□□ -1.68
HUL4	YJR036C	TRE1	Q08919	783 aa		4.54	□□□□□ -1.68
HUL4	YJR036C	INP53	Q12271	1107 aa		4.54	□□□□□ -1.68
HUL4	YJR036C	YOS9	Q99220	542 aa		4.54	□□□□□ -1.68
HUL4	YJR036C	CDC37	P06101	506 aa	Known RBP	4.53	□□□□□ -1.68
HUL4	YJR036C	HIP1	P06775	603 aa		4.53	□□□□□ -1.68
HUL4	YJR036C	RPS24A	P0CX31	135 aa	Known RBP	4.53	□□□□□ -1.68
HUL4	YJR036C	RPS24B	P0CX32	135 aa	Known RBP	4.53	□□□□□ -1.68
HUL4	YJR036C	SCH9	P11792	824 aa	Known RBP	4.53	□□□□□ -1.68
HUL4	YJR036C	SPE2	P21182	396 aa		4.53	□□□□□ -1.68
HUL4	YJR036C	CIN8	P27895	1000 aa		4.53	□□□□□ -1.68
HUL4	YJR036C	IDH2	P28241	369 aa	Known RBP	4.53	□□□□□ -1.68
HUL4	YJR036C	YME2	P32843	850 aa		4.53	□□□□□ -1.68
HUL4	YJR036C	CMC1	P36064	111 aa		4.53	□□□□□ -1.68
HUL4	YJR036C	FLR1	P38124	548 aa		4.53	□□□□□ -1.68
HUL4	YJR036C	ATG14	P38270	344 aa		4.53	□□□□□ -1.68
HUL4	YJR036C	RTC3	P38804	111 aa	Predicted RBP	4.53	□□□□□ -1.68
HUL4	YJR036C	NDC80	P40460	691 aa		4.53	□□□□□ -1.68
HUL4	YJR036C	AGE2	P40529	298 aa		4.53	□□□□□ -1.68
HUL4	YJR036C	DOT5	P40553	215 aa		4.53	□□□□□ -1.68
HUL4	YJR036C	SLI1	P53304	468 aa		4.53	□□□□□ -1.68
HUL4	YJR036C	IRC4	Q03036	179 aa		4.53	□□□□□ -1.68
HUL4	YJR036C	SEC10	Q06245	871 aa		4.53	□□□□□ -1.68
HUL4	YJR036C	AIM6	Q07716	390 aa		4.53	□□□□□ -1.68
HUL4	YJR036C	UPC2	Q12151	913 aa		4.53	□□□□□ -1.68
HUL4	YJR036C	PTC5	Q12511	572 aa		4.53	□□□□□ -1.68
HUL4	YJR036C	LEU4	P06208	619 aa	Known RBP	4.53	□□□□□ -1.68
HUL4	YJR036C	YCP4	P25349	247 aa	Known RBP	4.53	□□□□□ -1.68
HUL4	YJR036C	YKL077W	P36081	392 aa		4.53	□□□□□ -1.68
HUL4	YJR036C	PPS1	P38148	807 aa		4.53	□□□□□ -1.68
HUL4	YJR036C	EGD2	P38879	174 aa	Known RBP	4.53	□□□□□ -1.68
HUL4	YJR036C	YAR1	P46683	200 aa		4.53	□□□□□ -1.68
HUL4	YJR036C	CUS2	P53830	285 aa	Predicted RBP	4.53	□□□□□ -1.68
HUL4	YJR036C	ACL4	Q03771	387 aa		4.53	□□□□□ -1.68
HUL4	YJR036C	YDR179W-A	Q03983	463 aa		4.53	□□□□□ -1.68
HUL4	YJR036C	DFG5	Q05031	458 aa		4.53	□□□□□ -1.68
HUL4	YJR036C	YLR283W	Q05867	314 aa		4.53	□□□□□ -1.68
HUL4	YJR036C	YFH1	Q07540	174 aa		4.53	□□□□□ -1.68
HUL4	YJR036C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
HUL4	YJR036C	SPA2	P23201	1466 aa	Known RBP	4.52	□□□□□ -1.69
HUL4	YJR036C	ARG4	P04076	463 aa	Predicted RBP	4.52	□□□□□ -1.69
HUL4	YJR036C	MET16	P18408	261 aa	Predicted RBP	4.52	□□□□□ -1.69
HUL4	YJR036C	DAL2	P25335	343 aa		4.52	□□□□□ -1.69
HUL4	YJR036C	MCM4	P30665	933 aa	Known RBP	4.52	□□□□□ -1.69
HUL4	YJR036C	MVD1	P32377	396 aa	Known RBP	4.52	□□□□□ -1.69
HUL4	YJR036C	SEC61	P32915	480 aa		4.52	□□□□□ -1.69
HUL4	YJR036C	SPO23	P33757	523 aa		4.52	□□□□□ -1.69
HUL4	YJR036C	GSM1	P42950	618 aa		4.52	□□□□□ -1.69
HUL4	YJR036C	YFL066C	P43538	392 aa		4.52	□□□□□ -1.69
HUL4	YJR036C	FMP33	P46998	180 aa		4.52	□□□□□ -1.69
HUL4	YJR036C	YGL036W	P53185	909 aa	Predicted RBP	4.52	□□□□□ -1.69
HUL4	YJR036C	RRP46	P53256	223 aa	Predicted RBP	4.52	□□□□□ -1.69
HUL4	YJR036C	GFD1	Q04839	188 aa	Known RBP	4.52	□□□□□ -1.69
HUL4	YJR036C	TMA16	Q08687	178 aa		4.52	□□□□□ -1.69
HUL4	YJR036C	GRE1	Q08969	168 aa		4.52	□□□□□ -1.69
HUL4	YJR036C	YDL109C	Q12103	647 aa		4.52	□□□□□ -1.69
HUL4	YJR036C	YLL058W	Q12198	575 aa		4.52	□□□□□ -1.69
HUL4	YJR036C	LDB19	Q12502	818 aa		4.52	□□□□□ -1.69
HUL4	YJR036C	AI1	P03875	834 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms