RNA–Protein interactions for RNA: YHR105W

YPT35, Transcript of Endosomal protein of unknown function, yeast

Gene YPT35, Length 645 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT35	YHR105W	SFI1	Q12369	946 aa		3.9	□□□□□ -1.79
YPT35	YHR105W	GAL80	P04387	435 aa		3.89	□□□□□ -1.79
YPT35	YHR105W	HXK2	P04807	486 aa	Known RBP	3.89	□□□□□ -1.79
YPT35	YHR105W	GPA1	P08539	472 aa		3.89	□□□□□ -1.79
YPT35	YHR105W	ILS1	P09436	1072 aa	Known RBP	3.89	□□□□□ -1.79
YPT35	YHR105W	ELO2	P25358	347 aa		3.89	□□□□□ -1.79
YPT35	YHR105W	ADH7	P25377	361 aa		3.89	□□□□□ -1.79
YPT35	YHR105W	PUP3	P25451	205 aa	Known RBP	3.89	□□□□□ -1.79
YPT35	YHR105W	SSE2	P32590	693 aa	Known RBP	3.89	□□□□□ -1.79
YPT35	YHR105W	UBP11	P36026	717 aa		3.89	□□□□□ -1.79
YPT35	YHR105W	PXL1	P36166	706 aa		3.89	□□□□□ -1.79
YPT35	YHR105W	ELO1	P39540	310 aa		3.89	□□□□□ -1.79
YPT35	YHR105W	UIP3	P39547	235 aa		3.89	□□□□□ -1.79
YPT35	YHR105W	TAX4	P47030	604 aa		3.89	□□□□□ -1.79
YPT35	YHR105W	IRC8	P47046	822 aa		3.89	□□□□□ -1.79
YPT35	YHR105W	YTP1	P53584	459 aa		3.89	□□□□□ -1.79
YPT35	YHR105W	MSC1	Q03104	513 aa		3.89	□□□□□ -1.79
YPT35	YHR105W	VPS38	Q05919	439 aa		3.89	□□□□□ -1.79
YPT35	YHR105W	YLR455W	Q06188	304 aa		3.89	□□□□□ -1.79
YPT35	YHR105W	GRC3	Q07845	632 aa		3.89	□□□□□ -1.79
YPT35	YHR105W	RPS10A	Q08745	105 aa	Predicted RBP	3.89	□□□□□ -1.79
YPT35	YHR105W	RIM20	Q12033	661 aa		3.89	□□□□□ -1.79
YPT35	YHR105W	STE50	P25344	346 aa		3.88	□□□□□ -1.79
YPT35	YHR105W	PRD1	P25375	712 aa		3.88	□□□□□ -1.79
YPT35	YHR105W	ADK2	P26364	225 aa		3.88	□□□□□ -1.79
YPT35	YHR105W	YKL050C	P35736	922 aa		3.88	□□□□□ -1.79
YPT35	YHR105W	NUP133	P36161	1157 aa		3.88	□□□□□ -1.79
YPT35	YHR105W	VID24	P38263	362 aa		3.88	□□□□□ -1.79
YPT35	YHR105W	RPS10B	P46784	105 aa	Known RBP	3.88	□□□□□ -1.79
YPT35	YHR105W	YML6	P51998	286 aa		3.88	□□□□□ -1.79
YPT35	YHR105W	SGF73	P53165	657 aa		3.88	□□□□□ -1.79
YPT35	YHR105W	IST1	P53843	298 aa	Predicted RBP	3.88	□□□□□ -1.79
YPT35	YHR105W	IPI3	P53877	555 aa		3.88	□□□□□ -1.79
YPT35	YHR105W	RPA49	Q01080	415 aa	Predicted RBP	3.88	□□□□□ -1.79
YPT35	YHR105W	DPB4	Q04603	196 aa	Known RBP	3.88	□□□□□ -1.79
YPT35	YHR105W	COQ11	Q05892	277 aa		3.88	□□□□□ -1.79
YPT35	YHR105W	FMP40	Q08968	688 aa	Predicted RBP	3.88	□□□□□ -1.79
YPT35	YHR105W	AVL9	Q12500	764 aa		3.88	□□□□□ -1.79
YPT35	YHR105W	YNL162W-A	Q3E7A8	72 aa		3.88	□□□□□ -1.79
YPT35	YHR105W	GEA2	P39993	1459 aa	Known RBP	3.87	□□□□□ -1.79
YPT35	YHR105W	QCR6	P00127	147 aa		3.87	□□□□□ -1.79
YPT35	YHR105W	APE1	P14904	514 aa		3.87	□□□□□ -1.79
YPT35	YHR105W	BUD14	P27637	709 aa		3.87	□□□□□ -1.79
YPT35	YHR105W	PMT1	P33775	817 aa		3.87	□□□□□ -1.79
YPT35	YHR105W	YBR144C	P34215	104 aa		3.87	□□□□□ -1.79
YPT35	YHR105W	SEF1	P34228	1148 aa		3.87	□□□□□ -1.79
YPT35	YHR105W	SRP72	P38688	640 aa	Known RBP	3.87	□□□□□ -1.79
YPT35	YHR105W	AFG3	P39925	761 aa		3.87	□□□□□ -1.79
YPT35	YHR105W	BNI5	P53890	448 aa	Known RBP	3.87	□□□□□ -1.79
YPT35	YHR105W	BOP3	P53958	396 aa		3.87	□□□□□ -1.79
YPT35	YHR105W	ASI1	P54074	624 aa		3.87	□□□□□ -1.79
YPT35	YHR105W	PFA5	Q03289	374 aa		3.87	□□□□□ -1.79
YPT35	YHR105W	YDR239C	Q03780	787 aa		3.87	□□□□□ -1.79
YPT35	YHR105W	ARX1	Q03862	593 aa	Known RBP	3.87	□□□□□ -1.79
YPT35	YHR105W	RBS1	Q05672	457 aa	Known RBP	3.87	□□□□□ -1.79
YPT35	YHR105W	COQ9	Q05779	260 aa		3.87	□□□□□ -1.79
YPT35	YHR105W	ADE13	Q05911	482 aa	Known RBP	3.87	□□□□□ -1.79
YPT35	YHR105W	BSP1	Q06604	576 aa		3.87	□□□□□ -1.79
YPT35	YHR105W	SLK19	Q08581	821 aa	Known RBP	3.87	□□□□□ -1.79
YPT35	YHR105W	YOR389W	Q08912	624 aa		3.87	□□□□□ -1.79
YPT35	YHR105W	ATG29	Q12092	213 aa		3.87	□□□□□ -1.79
YPT35	YHR105W	ARO1	P08566	1588 aa	Known RBP	3.87	□□□□□ -1.79
YPT35	YHR105W	SNT2	P53127	1403 aa		3.87	□□□□□ -1.79
YPT35	YHR105W	HOM2	P13663	365 aa	Known RBP	3.86	□□□□□ -1.79
YPT35	YHR105W	IMG1	P25626	169 aa		3.86	□□□□□ -1.79
YPT35	YHR105W	MRE11	P32829	692 aa		3.86	□□□□□ -1.79
YPT35	YHR105W	GCS1	P35197	352 aa		3.86	□□□□□ -1.79
YPT35	YHR105W	STB6	P36085	766 aa		3.86	□□□□□ -1.79
YPT35	YHR105W	OPY1	P38271	328 aa		3.86	□□□□□ -1.79
YPT35	YHR105W	TSC10	P38342	320 aa		3.86	□□□□□ -1.79
YPT35	YHR105W	ANS1	P38832	159 aa		3.86	□□□□□ -1.79
YPT35	YHR105W	VID30	P53076	958 aa		3.86	□□□□□ -1.79
YPT35	YHR105W	RQC1	Q05468	723 aa	Known RBP	3.86	□□□□□ -1.79
YPT35	YHR105W	THI7	Q05998	598 aa		3.86	□□□□□ -1.79
YPT35	YHR105W	TEN1	Q07921	160 aa		3.86	□□□□□ -1.79
YPT35	YHR105W	FRE7	Q12333	620 aa		3.86	□□□□□ -1.79
YPT35	YHR105W	SMC6	Q12749	1114 aa		3.86	□□□□□ -1.79
YPT35	YHR105W	TY1B-H	O13535	1793 aa		3.86	□□□□□ -1.79
YPT35	YHR105W	TY1B-DR5	P0C2I2	1755 aa		3.86	□□□□□ -1.79
YPT35	YHR105W	TY1B-DR6	P0C2I3	1755 aa		3.86	□□□□□ -1.79
YPT35	YHR105W	TY1B-LR2	P0C2I5	1755 aa		3.86	□□□□□ -1.79
YPT35	YHR105W	TY1B-LR3	P0C2I6	1755 aa	Known RBP	3.86	□□□□□ -1.79
YPT35	YHR105W	TY1B-PR1	P0C2I9	1755 aa	Known RBP	3.86	□□□□□ -1.79
YPT35	YHR105W	TY1B-PR2	P0C2J0	1756 aa		3.86	□□□□□ -1.79
YPT35	YHR105W	TY1B-PR3	P0C2J1	1755 aa	Known RBP	3.86	□□□□□ -1.79
YPT35	YHR105W	TY1B-JR1	P47098	1755 aa		3.86	□□□□□ -1.79
YPT35	YHR105W	TY1B-ML2	Q03434	1755 aa	Known RBP	3.86	□□□□□ -1.79
YPT35	YHR105W	TY1B-ER1	Q03612	1755 aa		3.86	□□□□□ -1.79
YPT35	YHR105W	TY1B-ML1	Q04711	1755 aa	Known RBP	3.86	□□□□□ -1.79
YPT35	YHR105W	TY1B-GR2	Q12269	1755 aa		3.86	□□□□□ -1.79
YPT35	YHR105W	TY1B-OL	Q12273	1755 aa		3.86	□□□□□ -1.79
YPT35	YHR105W	TY1B-PL	Q12414	1755 aa	Known RBP	3.86	□□□□□ -1.79
YPT35	YHR105W	MMS1	Q06211	1407 aa		3.86	□□□□□ -1.79
YPT35	YHR105W	ERG11	P10614	530 aa		3.85	□□□□□ -1.79
YPT35	YHR105W	MRP2	P10663	115 aa	Predicted RBP	3.85	□□□□□ -1.79
YPT35	YHR105W	PMS1	P14242	873 aa		3.85	□□□□□ -1.79
YPT35	YHR105W	PDA1	P16387	420 aa	Known RBP	3.85	□□□□□ -1.79
YPT35	YHR105W	APN1	P22936	367 aa		3.85	□□□□□ -1.79
YPT35	YHR105W	TKL1	P23254	680 aa	Known RBP	3.85	□□□□□ -1.79
YPT35	YHR105W	CLB2	P24869	491 aa		3.85	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms