RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN1	YHR027C	IDS2	P46958	469 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	THI11	P47183	340 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	UBC12	P52491	188 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	DOC1	P53068	250 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	GTF1	P53260	183 aa	Predicted RBP	3.11	□□□□□ -1.91
RPN1	YHR027C	SVL3	Q03088	825 aa	Known RBP	3.11	□□□□□ -1.91
RPN1	YHR027C	EAR1	Q03212	550 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	RSN1	Q03516	953 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	MYO5	Q04439	1219 aa	Known RBP	3.11	□□□□□ -1.91
RPN1	YHR027C	RBS1	Q05672	457 aa	Known RBP	3.11	□□□□□ -1.91
RPN1	YHR027C	PDR8	Q06149	701 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	CSC1	Q06538	782 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	GRC3	Q07845	632 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	3.11	□□□□□ -1.91	not detected
RPN1	YHR027C	YMR084W	A2P2R3	262 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	TPK3	P05986	398 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	ACE2	P21192	770 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	RAM1	P22007	431 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	YSC84	P32793	468 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	KAE1	P36132	386 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	RPF2	P36160	344 aa	Known RBP	3.11	□□□□□ -1.91
RPN1	YHR027C	STV1	P37296	890 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	YHK8	P38776	514 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	YHR078W	P38799	552 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	SPF1	P39986	1215 aa	Known RBP	3.11	□□□□□ -1.91
RPN1	YHR027C	YKE4	P40544	346 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	RRN7	P40992	514 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	CAF16	P43569	289 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	ACF4	P47129	309 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	NUP42	P49686	430 aa	Known RBP	3.11	□□□□□ -1.91
RPN1	YHR027C	ORC5	P50874	479 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	CWC24	P53769	259 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	FOL1	P53848	824 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	ARP4	P80428	489 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	RRN5	Q02983	363 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	BUL2	Q03758	920 aa	Known RBP	3.11	□□□□□ -1.91
RPN1	YHR027C	YDR387C	Q04162	555 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	UTP14	Q04500	899 aa	Known RBP	3.11	□□□□□ -1.91
RPN1	YHR027C	PAL1	Q05518	499 aa	Known RBP	3.11	□□□□□ -1.91
RPN1	YHR027C	CIA1	Q05583	330 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	YPS7	Q06325	596 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	YDL086W	Q07505	273 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	LUC7	Q07508	261 aa	Predicted RBP	3.11	□□□□□ -1.91
RPN1	YHR027C	THI20	Q08224	551 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	FRE3	Q08905	711 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	PGC1	Q08959	321 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	TYW1	Q08960	810 aa	Known RBP	3.11	□□□□□ -1.91
RPN1	YHR027C	YPR204W	Q08995	1032 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	BMT6	Q12291	365 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	STB3	Q12427	513 aa		3.11	□□□□□ -1.91
RPN1	YHR027C	YLR462W	O13556	202 aa		3.1	□□□□□ -1.91
RPN1	YHR027C	SCEI	P03882	235 aa		3.1	□□□□□ -1.91
RPN1	YHR027C	ARG82	P07250	355 aa		3.1	□□□□□ -1.91
RPN1	YHR027C	CHS1	P08004	1131 aa		3.1	□□□□□ -1.91
RPN1	YHR027C	BAR1	P12630	587 aa		3.1	□□□□□ -1.91
RPN1	YHR027C	SPO16	P17122	198 aa		3.1	□□□□□ -1.91
RPN1	YHR027C	YCK1	P23291	538 aa		3.1	□□□□□ -1.91
RPN1	YHR027C	DMC1	P25453	334 aa		3.1	□□□□□ -1.91
RPN1	YHR027C	HEM3	P28789	327 aa		3.1	□□□□□ -1.91
RPN1	YHR027C	SCM4	P32564	187 aa		3.1	□□□□□ -1.91
RPN1	YHR027C	VPS17	P32913	551 aa		3.1	□□□□□ -1.91
RPN1	YHR027C	ELF1	P36053	145 aa		3.1	□□□□□ -1.91
RPN1	YHR027C	APN2	P38207	520 aa		3.1	□□□□□ -1.91
RPN1	YHR027C	VHC1	P38329	1120 aa		3.1	□□□□□ -1.91
RPN1	YHR027C	GUA1	P38625	525 aa	Known RBP	3.1	□□□□□ -1.91
RPN1	YHR027C	YHL049C	P38722	271 aa		3.1	□□□□□ -1.91
RPN1	YHR027C	STT3	P39007	718 aa	Known RBP	3.1	□□□□□ -1.91
RPN1	YHR027C	END3	P39013	349 aa		3.1	□□□□□ -1.91
RPN1	YHR027C	SSO2	P39926	295 aa		3.1	□□□□□ -1.91
RPN1	YHR027C	UBP9	P39967	754 aa		3.1	□□□□□ -1.91
RPN1	YHR027C	YEL075C	P39972	122 aa		3.1	□□□□□ -1.91
RPN1	YHR027C	YER189W	P40104	122 aa		3.1	□□□□□ -1.91
RPN1	YHR027C	PSY2	P40164	858 aa		3.1	□□□□□ -1.91
RPN1	YHR027C	LSB6	P42951	607 aa		3.1	□□□□□ -1.91
RPN1	YHR027C	YFL064C	P43540	174 aa		3.1	□□□□□ -1.91
RPN1	YHR027C	AGP3	P43548	558 aa		3.1	□□□□□ -1.91
RPN1	YHR027C	AGX1	P43567	385 aa		3.1	□□□□□ -1.91
RPN1	YHR027C	PYK2	P52489	506 aa	Known RBP	3.1	□□□□□ -1.91
RPN1	YHR027C	PMT5	P52867	743 aa		3.1	□□□□□ -1.91
RPN1	YHR027C	PIP2	P52960	996 aa		3.1	□□□□□ -1.91
RPN1	YHR027C	CUL3	P53202	744 aa		3.1	□□□□□ -1.91
RPN1	YHR027C	YNL010W	P53981	241 aa	Known RBP	3.1	□□□□□ -1.91
RPN1	YHR027C	PRP42	Q03776	544 aa	Known RBP	3.1	□□□□□ -1.91
RPN1	YHR027C	YET2	Q04210	160 aa		3.1	□□□□□ -1.91
RPN1	YHR027C	UFO1	Q04511	668 aa		3.1	□□□□□ -1.91
RPN1	YHR027C	BSC2	Q05611	235 aa		3.1	□□□□□ -1.91
RPN1	YHR027C	REH1	Q06709	432 aa		3.1	□□□□□ -1.91
RPN1	YHR027C	HBT1	Q07653	1046 aa	Known RBP	3.1	□□□□□ -1.91
RPN1	YHR027C	MSC6	Q08818	692 aa	Known RBP	3.1	□□□□□ -1.91
RPN1	YHR027C	YFR010W-A	P0C5N0	62 aa		3.1	□□□□□ -1.91
RPN1	YHR027C	RAD18	P10862	487 aa		3.1	□□□□□ -1.91
RPN1	YHR027C	OM45	P16547	393 aa		3.1	□□□□□ -1.91
RPN1	YHR027C	FUN26	P31381	517 aa		3.1	□□□□□ -1.91
RPN1	YHR027C	HEM12	P32347	362 aa	Predicted RBP	3.1	□□□□□ -1.91
RPN1	YHR027C	NGG1	P32494	702 aa		3.1	□□□□□ -1.91
RPN1	YHR027C	UTR4	P32626	227 aa		3.1	□□□□□ -1.91
RPN1	YHR027C	LST4	P34239	828 aa		3.1	□□□□□ -1.91
RPN1	YHR027C	YBR056W	P38081	501 aa		3.1	□□□□□ -1.91
RPN1	YHR027C	MSG5	P38590	489 aa		3.1	□□□□□ -1.91
RPN1	YHR027C	FHL1	P39521	936 aa		3.1	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms