RNA–Protein interactions for RNA: YHL024W

RIM4, Transcript of Putative RNA-binding protein, yeast

Gene RIM4, Length 2,142 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIM4	YHL024W	CRM1	P30822	1084 aa	Known RBP	3.88	□□□□□ -1.79
RIM4	YHL024W	HEM12	P32347	362 aa	Predicted RBP	3.88	□□□□□ -1.79
RIM4	YHL024W	HIR1	P32479	840 aa		3.88	□□□□□ -1.79
RIM4	YHL024W	PRX1	P34227	261 aa	Known RBP	3.88	□□□□□ -1.79
RIM4	YHL024W	MYO3	P36006	1272 aa		3.88	□□□□□ -1.79
RIM4	YHL024W	SDS22	P36047	338 aa		3.88	□□□□□ -1.79
RIM4	YHL024W	BIT2	P38346	545 aa		3.88	□□□□□ -1.79
RIM4	YHL024W	YHR131C	P38835	850 aa		3.88	□□□□□ -1.79
RIM4	YHL024W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	3.88	□□□□□ -1.79	not detected
RIM4	YHL024W	REV7	P38927	245 aa		3.88	□□□□□ -1.79
RIM4	YHL024W	CCT4	P39078	528 aa	Known RBP	3.88	□□□□□ -1.79
RIM4	YHL024W	YTA12	P40341	825 aa		3.88	□□□□□ -1.79
RIM4	YHL024W	TFG2	P41896	400 aa	Predicted RBP	3.88	□□□□□ -1.79
RIM4	YHL024W	BIT61	P47041	543 aa		3.88	□□□□□ -1.79
RIM4	YHL024W	YJR079W	P47126	109 aa		3.88	□□□□□ -1.79
RIM4	YHL024W	MSE1	P48525	536 aa		3.88	□□□□□ -1.79
RIM4	YHL024W	IMD3	P50095	523 aa	Known RBP	3.88	□□□□□ -1.79
RIM4	YHL024W	YGR021W	P53212	290 aa		3.88	□□□□□ -1.79
RIM4	YHL024W	PEX8	P53248	589 aa		3.88	□□□□□ -1.79
RIM4	YHL024W	LSB1	P53281	241 aa		3.88	□□□□□ -1.79
RIM4	YHL024W	YNL146W	P53906	100 aa		3.88	□□□□□ -1.79
RIM4	YHL024W	ERO1	Q03103	563 aa		3.88	□□□□□ -1.79
RIM4	YHL024W	YMR010W	Q03687	405 aa		3.88	□□□□□ -1.79
RIM4	YHL024W	ARP9	Q05123	467 aa		3.88	□□□□□ -1.79
RIM4	YHL024W	GLO2	Q05584	274 aa		3.88	□□□□□ -1.79
RIM4	YHL024W	YPD1	Q07688	167 aa		3.88	□□□□□ -1.79
RIM4	YHL024W	UIP4	Q08926	304 aa		3.88	□□□□□ -1.79
RIM4	YHL024W	YPR027C	Q12079	277 aa		3.88	□□□□□ -1.79
RIM4	YHL024W	ATG29	Q12092	213 aa		3.88	□□□□□ -1.79
RIM4	YHL024W	RPC40	P07703	335 aa	Known RBP	3.87	□□□□□ -1.79
RIM4	YHL024W	RAP1	P11938	827 aa		3.87	□□□□□ -1.79
RIM4	YHL024W	RPO26	P20435	155 aa		3.87	□□□□□ -1.79
RIM4	YHL024W	ZIP1	P31111	875 aa		3.87	□□□□□ -1.79
RIM4	YHL024W	YBL010C	P32788	280 aa		3.87	□□□□□ -1.79
RIM4	YHL024W	NOP4	P37838	685 aa	Known RBP	3.87	□□□□□ -1.79
RIM4	YHL024W	PPS1	P38148	807 aa		3.87	□□□□□ -1.79
RIM4	YHL024W	POP7	P38291	140 aa		3.87	□□□□□ -1.79
RIM4	YHL024W	COS111	P38308	924 aa		3.87	□□□□□ -1.79
RIM4	YHL024W	YMR262W	P38430	313 aa		3.87	□□□□□ -1.79
RIM4	YHL024W	VPS8	P39702	1274 aa		3.87	□□□□□ -1.79
RIM4	YHL024W	IES5	P40060	125 aa		3.87	□□□□□ -1.79
RIM4	YHL024W	DDI1	P40087	428 aa		3.87	□□□□□ -1.79
RIM4	YHL024W	BUD8	P41698	603 aa		3.87	□□□□□ -1.79
RIM4	YHL024W	TRS85	P46944	698 aa		3.87	□□□□□ -1.79
RIM4	YHL024W	ABM1	P47146	123 aa		3.87	□□□□□ -1.79
RIM4	YHL024W	DSD1	P53095	428 aa		3.87	□□□□□ -1.79
RIM4	YHL024W	RET3	P53600	189 aa		3.87	□□□□□ -1.79
RIM4	YHL024W	CNM67	P53865	581 aa	Known RBP	3.87	□□□□□ -1.79
RIM4	YHL024W	TGL2	P54857	326 aa		3.87	□□□□□ -1.79
RIM4	YHL024W	IRC4	Q03036	179 aa		3.87	□□□□□ -1.79
RIM4	YHL024W	YLR031W	Q07978	186 aa		3.87	□□□□□ -1.79
RIM4	YHL024W	SGT1	Q08446	395 aa		3.87	□□□□□ -1.79
RIM4	YHL024W	NEW1	Q08972	1196 aa	Known RBP	3.87	□□□□□ -1.79
RIM4	YHL024W	LAM4	P38800	1345 aa		3.87	□□□□□ -1.79
RIM4	YHL024W	HIS4	P00815	799 aa	Known RBP	3.86	□□□□□ -1.79
RIM4	YHL024W	INH1	P01097	85 aa		3.86	□□□□□ -1.79
RIM4	YHL024W	PIF1	P07271	859 aa		3.86	□□□□□ -1.79
RIM4	YHL024W	CBF2	P32504	956 aa		3.86	□□□□□ -1.79
RIM4	YHL024W	PKP1	P40530	394 aa		3.86	□□□□□ -1.79
RIM4	YHL024W	POL31	P46957	487 aa		3.86	□□□□□ -1.79
RIM4	YHL024W	YJR054W	P47114	497 aa		3.86	□□□□□ -1.79
RIM4	YHL024W	YGL117W	P53133	265 aa		3.86	□□□□□ -1.79
RIM4	YHL024W	MNP1	P53163	194 aa	Predicted RBP	3.86	□□□□□ -1.79
RIM4	YHL024W	SLI1	P53304	468 aa		3.86	□□□□□ -1.79
RIM4	YHL024W	ARC35	P53731	342 aa	Known RBP	3.86	□□□□□ -1.79
RIM4	YHL024W	YDL109C	Q12103	647 aa		3.86	□□□□□ -1.79
RIM4	YHL024W	RPO41	P13433	1351 aa	Known RBP	3.86	□□□□□ -1.79
RIM4	YHL024W	RAD1	P06777	1100 aa		3.86	□□□□□ -1.79
RIM4	YHL024W	SNF1	P06782	633 aa	Known RBP	3.86	□□□□□ -1.79
RIM4	YHL024W	CBP6	P07253	162 aa	Predicted RBP	3.86	□□□□□ -1.79
RIM4	YHL024W	FRS2	P15625	503 aa	Known RBP	3.86	□□□□□ -1.79
RIM4	YHL024W	COX11	P19516	300 aa	Known RBP	3.86	□□□□□ -1.79
RIM4	YHL024W	DPB2	P24482	689 aa	Predicted RBP	3.86	□□□□□ -1.79
RIM4	YHL024W	LCB1	P25045	558 aa	Known RBP	3.86	□□□□□ -1.79
RIM4	YHL024W	RAD57	P25301	460 aa		3.86	□□□□□ -1.79
RIM4	YHL024W	ADY2	P25613	283 aa		3.86	□□□□□ -1.79
RIM4	YHL024W	MVD1	P32377	396 aa	Known RBP	3.86	□□□□□ -1.79
RIM4	YHL024W	MF(ALPHA)2	P32435	120 aa		3.86	□□□□□ -1.79
RIM4	YHL024W	DPH2	P32461	534 aa		3.86	□□□□□ -1.79
RIM4	YHL024W	HXT4	P32467	576 aa		3.86	□□□□□ -1.79
RIM4	YHL024W	NIP1	P32497	812 aa	Known RBP	3.86	□□□□□ -1.79
RIM4	YHL024W	HIS7	P33734	552 aa	Known RBP	3.86	□□□□□ -1.79
RIM4	YHL024W	UBP11	P36026	717 aa		3.86	□□□□□ -1.79
RIM4	YHL024W	PCF11	P39081	626 aa	Predicted RBP	3.86	□□□□□ -1.79
RIM4	YHL024W	FMP52	P40008	231 aa		3.86	□□□□□ -1.79
RIM4	YHL024W	QRI1	P43123	477 aa	Known RBP	3.86	□□□□□ -1.79
RIM4	YHL024W	MNT4	P53745	580 aa		3.86	□□□□□ -1.79
RIM4	YHL024W	YNL034W	P53963	612 aa		3.86	□□□□□ -1.79
RIM4	YHL024W	YNL018C	P53976	612 aa		3.86	□□□□□ -1.79
RIM4	YHL024W	MMT1	Q03218	510 aa		3.86	□□□□□ -1.79
RIM4	YHL024W	GFD1	Q04839	188 aa	Known RBP	3.86	□□□□□ -1.79
RIM4	YHL024W	RBS1	Q05672	457 aa	Known RBP	3.86	□□□□□ -1.79
RIM4	YHL024W	MLC2	Q06580	163 aa		3.86	□□□□□ -1.79
RIM4	YHL024W	NSE1	Q07913	336 aa		3.86	□□□□□ -1.79
RIM4	YHL024W	DIS3	Q08162	1001 aa	Known RBP	3.86	□□□□□ -1.79
RIM4	YHL024W	POM34	Q12445	299 aa		3.86	□□□□□ -1.79
RIM4	YHL024W	SEC7	P11075	2009 aa	Known RBP	3.85	□□□□□ -1.79
RIM4	YHL024W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	3.85	□□□□□ -1.79	not detected
RIM4	YHL024W	ERG20	P08524	352 aa	Known RBP	3.85	□□□□□ -1.79
RIM4	YHL024W	STE12	P13574	688 aa		3.85	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms