RNA–Protein interactions for RNA: YHL006C

SHU1, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU1, Length 453 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU1YHL006C CRN1Q06440 651 aa12.97□□□□□ -0.33
SHU1YHL006C ATG23Q06671 453 aa12.97□□□□□ -0.33
SHU1YHL006C GUP2Q08929 609 aa12.97□□□□□ -0.33
SHU1YHL006C DIN7Q12086 430 aa12.97□□□□□ -0.33
SHU1YHL006C CLN2P20438 545 aa12.96□□□□□ -0.33
SHU1YHL006C HOG1P32485 435 aa12.96□□□□□ -0.33
SHU1YHL006C SQT1P35184 431 aa12.96□□□□□ -0.33
SHU1YHL006C SOL2P37262 315 aa12.96□□□□□ -0.33
SHU1YHL006C YHR127WP38833 243 aaKnown RBP12.96□□□□□ -0.33
SHU1YHL006C TIS11P47977 285 aa12.96□□□□□ -0.33
SHU1YHL006C COS12P53053 380 aa12.96□□□□□ -0.33
SHU1YHL006C YET3Q07451 203 aa12.96□□□□□ -0.33
SHU1YHL006C NOP6Q07623 225 aaKnown RBP12.96□□□□□ -0.33
SHU1YHL006C UBX3Q12229 455 aa12.96□□□□□ -0.33
SHU1YHL006C YMR030W-AQ3E760 96 aa12.96□□□□□ -0.33
SHU1YHL006C CDC8P00572 216 aa12.95□□□□□ -0.34
SHU1YHL006C CDC21P06785 304 aa12.95□□□□□ -0.34
SHU1YHL006C MET8P15807 274 aa12.95□□□□□ -0.34
SHU1YHL006C ETR1P38071 380 aa12.95□□□□□ -0.34
SHU1YHL006C SPF1P39986 1215 aaKnown RBP12.95□□□□□ -0.34
SHU1YHL006C KTR5P53966 522 aaPredicted RBP12.95□□□□□ -0.34
SHU1YHL006C BUD22Q04347 519 aaKnown RBP12.95□□□□□ -0.34
SHU1YHL006C NUR1Q12066 484 aa12.95□□□□□ -0.34
SHU1YHL006C PET111P08468 800 aa12.94□□□□□ -0.34
SHU1YHL006C FUR1P18562 216 aaKnown RBP12.94□□□□□ -0.34
SHU1YHL006C NTH1P32356 751 aa12.94□□□□□ -0.34
SHU1YHL006C RIM1P32445 135 aaKnown RBP12.94□□□□□ -0.34
SHU1YHL006C RIM11P38615 370 aa12.94□□□□□ -0.34
SHU1YHL006C HOS4P40480 1083 aa12.94□□□□□ -0.34
SHU1YHL006C GOT1Q03554 138 aa12.94□□□□□ -0.34
SHU1YHL006C SIZ1Q04195 904 aa12.94□□□□□ -0.34
SHU1YHL006C RRP45Q05636 305 aaKnown RBP12.94□□□□□ -0.34
SHU1YHL006C YOR389WQ08912 624 aa12.94□□□□□ -0.34
SHU1YHL006C YPL278CQ08990 100 aa12.94□□□□□ -0.34
SHU1YHL006C YLR111WQ12528 110 aa12.94□□□□□ -0.34
SHU1YHL006C TRX2P22803 104 aaKnown RBP12.93□□□□□ -0.34
SHU1YHL006C YCK2P23292 546 aaKnown RBP12.93□□□□□ -0.34
SHU1YHL006C CLB1P24868 471 aa12.93□□□□□ -0.34
SHU1YHL006C PTP1P25044 335 aa12.93□□□□□ -0.34
SHU1YHL006C MUP3P38734 546 aa12.93□□□□□ -0.34
SHU1YHL006C MPS2P53159 387 aa12.93□□□□□ -0.34
SHU1YHL006C ERG26P53199 349 aaKnown RBP12.93□□□□□ -0.34
SHU1YHL006C CLD1P53264 445 aa12.93□□□□□ -0.34
SHU1YHL006C VPS60Q03390 229 aa12.93□□□□□ -0.34
SHU1YHL006C VHS1Q03785 461 aa12.93□□□□□ -0.34
SHU1YHL006C UTP13Q05946 817 aaKnown RBP12.93□□□□□ -0.34
SHU1YHL006C YLR030WQ07967 263 aa12.93□□□□□ -0.34
SHU1YHL006C YDR056CQ12025 205 aa12.93□□□□□ -0.34
SHU1YHL006C PTM1P32857 523 aa12.92□□□□□ -0.34
SHU1YHL006C CYM1P32898 989 aa12.92□□□□□ -0.34
SHU1YHL006C SFC1P33303 322 aa12.92□□□□□ -0.34
SHU1YHL006C TAF14P35189 244 aa12.92□□□□□ -0.34
SHU1YHL006C SPP381P38282 291 aaPredicted RBP12.92□□□□□ -0.34
SHU1YHL006C MEP1P40260 492 aa12.92□□□□□ -0.34
SHU1YHL006C YJL049WP47048 450 aa12.92□□□□□ -0.34
SHU1YHL006C ZIP2P53061 704 aa12.92□□□□□ -0.34
SHU1YHL006C CSL4P53859 292 aaPredicted RBP12.92□□□□□ -0.34
SHU1YHL006C SHR3Q02774 210 aa12.92□□□□□ -0.34
SHU1YHL006C TAF12Q03761 539 aa12.92□□□□□ -0.34
SHU1YHL006C GLE1Q12315 538 aa12.92□□□□□ -0.34
SHU1YHL006C FRE7Q12333 620 aa12.92□□□□□ -0.34
SHU1YHL006C MST1P07236 462 aa12.91□□□□□ -0.34
SHU1YHL006C CMP2P14747 604 aa12.91□□□□□ -0.34
SHU1YHL006C AAD3P25612 363 aa12.91□□□□□ -0.34
SHU1YHL006C SEC28P40509 296 aaKnown RBP12.91□□□□□ -0.34
SHU1YHL006C YGR015CP53208 328 aa12.91□□□□□ -0.34
SHU1YHL006C FHN1P53279 174 aa12.91□□□□□ -0.34
SHU1YHL006C ESF2P53743 316 aaKnown RBP12.91□□□□□ -0.34
SHU1YHL006C SPO20Q04359 397 aa12.91□□□□□ -0.34
SHU1YHL006C YLR177WQ06251 628 aa12.91□□□□□ -0.34
SHU1YHL006C YOL107WQ12239 342 aa12.91□□□□□ -0.34
SHU1YHL006C RPS4AP0CX35 261 aaKnown RBP12.9□□□□□ -0.34
SHU1YHL006C RPS4BP0CX36 261 aaKnown RBP12.9□□□□□ -0.34
SHU1YHL006C ADH4P10127 382 aa12.9□□□□□ -0.34
SHU1YHL006C INM1P38710 295 aa12.9□□□□□ -0.34
SHU1YHL006C GIC1P38785 314 aa12.9□□□□□ -0.34
SHU1YHL006C STB2P46679 850 aa12.9□□□□□ -0.34
SHU1YHL006C MTQ2Q03920 221 aaPredicted RBP12.9□□□□□ -0.34
SHU1YHL006C YBR056W-AI2HB52 66 aa12.89□□□□□ -0.35
SHU1YHL006C GAL7P08431 366 aa12.89□□□□□ -0.35
SHU1YHL006C ARG1P22768 420 aa12.89□□□□□ -0.35
SHU1YHL006C RGA1P39083 1007 aa12.89□□□□□ -0.35
SHU1YHL006C NPT1P39683 429 aaKnown RBP12.89□□□□□ -0.35
SHU1YHL006C TRS23Q03784 219 aa12.89□□□□□ -0.35
SHU1YHL006C CSN9Q03981 162 aa12.89□□□□□ -0.35
SHU1YHL006C RRN11Q04712 507 aa12.89□□□□□ -0.35
SHU1YHL006C KIN2P13186 1147 aaKnown RBP12.88□□□□□ -0.35
SHU1YHL006C TYR1P20049 452 aa12.88□□□□□ -0.35
SHU1YHL006C AMD2P22580 549 aa12.88□□□□□ -0.35
SHU1YHL006C MRPL25P23369 157 aa12.88□□□□□ -0.35
SHU1YHL006C IMG1P25626 169 aa12.88□□□□□ -0.35
SHU1YHL006C SKT5P34226 696 aa12.88□□□□□ -0.35
SHU1YHL006C CCT2P39076 527 aaKnown RBP12.88□□□□□ -0.35
SHU1YHL006C YJR149WP47177 404 aa12.88□□□□□ -0.35
SHU1YHL006C YMR034CQ05131 434 aaPredicted RBP12.88□□□□□ -0.35
SHU1YHL006C GYP1Q08484 637 aa12.88□□□□□ -0.35
SHU1YHL006C YOR114WQ12219 294 aa12.88□□□□□ -0.35
SHU1YHL006C SLP1Q12232 587 aa12.88□□□□□ -0.35
SHU1YHL006C KCS1Q12494 1050 aa12.88□□□□□ -0.35
SHU1YHL006C LAG2Q92325 660 aa12.88□□□□□ -0.35
Retrieved 100 of 5,963 RNA–protein pairs in 41.1 ms