RNA–Protein interactions for RNA: YGR058W

PEF1, Transcript of Penta-EF-hand protein, yeastyeast

Gene PEF1, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEF1YGR058W IST3P40565 148 aaPredicted RBP3.8□□□□□ -1.8
PEF1YGR058W CTF18P49956 741 aa3.8□□□□□ -1.8
PEF1YGR058W PKP2P53170 491 aa3.8□□□□□ -1.8
PEF1YGR058W NNF2P53253 936 aa3.8□□□□□ -1.8
PEF1YGR058W NUP100Q02629 959 aa3.8□□□□□ -1.8
PEF1YGR058W CSR1Q06705 408 aaKnown RBP3.8□□□□□ -1.8
PEF1YGR058W ATG9Q12142 997 aa3.8□□□□□ -1.8
PEF1YGR058W ERG27Q12452 347 aaKnown RBP3.8□□□□□ -1.8
PEF1YGR058W YOR019WQ99248 730 aa3.8□□□□□ -1.8
PEF1YGR058W MLP1Q02455 1875 aaKnown RBP3.79□□□□□ -1.8
PEF1YGR058W PDA1P16387 420 aaKnown RBP3.79□□□□□ -1.8
PEF1YGR058W ERG8P24521 451 aa3.79□□□□□ -1.8
PEF1YGR058W GAC1P28006 793 aa3.79□□□□□ -1.8
PEF1YGR058W RAD16P31244 790 aa3.79□□□□□ -1.8
PEF1YGR058W ARP1P38696 384 aa3.79□□□□□ -1.8
PEF1YGR058W PSD1P39006 500 aa3.79□□□□□ -1.8
PEF1YGR058W DHH1P39517 506 aaKnown RBP3.79□□□□□ -1.8
PEF1YGR058W PHO90P39535 881 aa3.79□□□□□ -1.8
PEF1YGR058W MIA40P36046 403 aa3.78□□□□□ -1.8
PEF1YGR058W PKP1P40530 394 aa3.78□□□□□ -1.8
PEF1YGR058W IST1P53843 298 aaPredicted RBP3.78□□□□□ -1.8
PEF1YGR058W YMR178WQ03219 274 aaKnown RBP3.78□□□□□ -1.8
PEF1YGR058W ADE13Q05911 482 aaKnown RBP3.78□□□□□ -1.8
PEF1YGR058W PSK2Q08217 1101 aa3.78□□□□□ -1.8
PEF1YGR058W SPT7P35177 1332 aa3.77□□□□□ -1.81
PEF1YGR058W HXK2P04807 486 aaKnown RBP3.77□□□□□ -1.81
PEF1YGR058W ERG7P38604 731 aa3.77□□□□□ -1.81
PEF1YGR058W KRE9P39005 276 aa3.77□□□□□ -1.81
PEF1YGR058W RGI2P40188 164 aa3.77□□□□□ -1.81
PEF1YGR058W SMK1P41808 388 aa3.77□□□□□ -1.81
PEF1YGR058W GUF1P46943 645 aa3.77□□□□□ -1.81
PEF1YGR058W IMP4P53941 290 aaKnown RBP3.77□□□□□ -1.81
PEF1YGR058W PDS5Q04264 1277 aa3.77□□□□□ -1.81
PEF1YGR058W TMA64Q04600 565 aaKnown RBP3.77□□□□□ -1.81
PEF1YGR058W ATG26Q06321 1198 aa3.77□□□□□ -1.81
PEF1YGR058W YBR298C-AQ8TGK4 73 aa3.77□□□□□ -1.81
PEF1YGR058W NOP1P15646 327 aaKnown RBP3.76□□□□□ -1.81
PEF1YGR058W CDC15P27636 974 aa3.76□□□□□ -1.81
PEF1YGR058W DBF20P32328 564 aa3.76□□□□□ -1.81
PEF1YGR058W YOX1P34161 385 aa3.76□□□□□ -1.81
PEF1YGR058W YER130CP39959 443 aa3.76□□□□□ -1.81
PEF1YGR058W SEC24P40482 926 aaKnown RBP3.76□□□□□ -1.81
PEF1YGR058W PSK1P31374 1356 aa3.76□□□□□ -1.81
PEF1YGR058W PGS1P25578 521 aa3.75□□□□□ -1.81
PEF1YGR058W ERG1P32476 496 aaKnown RBP3.75□□□□□ -1.81
PEF1YGR058W IME4P41833 600 aa3.75□□□□□ -1.81
PEF1YGR058W BNA1P47096 177 aa3.75□□□□□ -1.81
PEF1YGR058W VPS4P52917 437 aa3.75□□□□□ -1.81
PEF1YGR058W YML133CQ03099 1374 aa3.75□□□□□ -1.81
PEF1YGR058W YLL067CQ07888 1374 aa3.75□□□□□ -1.81
PEF1YGR058W YLL066CQ99208 1374 aa3.75□□□□□ -1.81
PEF1YGR058W MRS3P10566 314 aa3.74□□□□□ -1.81
PEF1YGR058W PRP16P15938 1071 aaPredicted RBP3.74□□□□□ -1.81
PEF1YGR058W MCM4P30665 933 aaKnown RBP3.74□□□□□ -1.81
PEF1YGR058W XRS2P33301 854 aa3.74□□□□□ -1.81
PEF1YGR058W TEF4P36008 412 aaKnown RBP3.74□□□□□ -1.81
PEF1YGR058W PHD1P36093 366 aa3.74□□□□□ -1.81
PEF1YGR058W MIC60P36112 540 aa3.74□□□□□ -1.81
PEF1YGR058W SPC34P36131 295 aa3.74□□□□□ -1.81
PEF1YGR058W RTS1P38903 757 aa3.74□□□□□ -1.81
PEF1YGR058W DPB11P47027 764 aaPredicted RBP3.74□□□□□ -1.81
PEF1YGR058W SMC3P47037 1230 aa3.74□□□□□ -1.81
PEF1YGR058W SOL4P53315 255 aa3.74□□□□□ -1.81
PEF1YGR058W RDR1Q08904 546 aa3.74□□□□□ -1.81
PEF1YGR058W LCB1P25045 558 aaKnown RBP3.73□□□□□ -1.81
PEF1YGR058W PRO3P32263 286 aaKnown RBP3.73□□□□□ -1.81
PEF1YGR058W YJL068CP40363 299 aa3.73□□□□□ -1.81
PEF1YGR058W STR3P53101 465 aaKnown RBP3.73□□□□□ -1.81
PEF1YGR058W TRM8Q12009 286 aa3.73□□□□□ -1.81
PEF1YGR058W APL4Q12028 832 aa3.73□□□□□ -1.81
PEF1YGR058W INP53Q12271 1107 aa3.73□□□□□ -1.81
PEF1YGR058W YLR302CO13544 120 aa3.72□□□□□ -1.81
PEF1YGR058W SNU114P36048 1008 aaKnown RBP3.72□□□□□ -1.81
PEF1YGR058W SDS24P38314 527 aa3.72□□□□□ -1.81
PEF1YGR058W UBA4P38820 440 aa3.72□□□□□ -1.81
PEF1YGR058W ANS1P38832 159 aa3.72□□□□□ -1.81
PEF1YGR058W RIC1P40395 1056 aa3.72□□□□□ -1.81
PEF1YGR058W DIM1P41819 318 aaKnown RBP3.72□□□□□ -1.81
PEF1YGR058W FMP45Q07651 309 aa3.72□□□□□ -1.81
PEF1YGR058W PSR2Q07949 397 aa3.72□□□□□ -1.81
PEF1YGR058W YBR085C-AO43137 85 aa3.71□□□□□ -1.82
PEF1YGR058W SNF1P06782 633 aaKnown RBP3.71□□□□□ -1.82
PEF1YGR058W RPB2P08518 1224 aaKnown RBP3.71□□□□□ -1.82
PEF1YGR058W PFK2P16862 959 aaKnown RBP RIP-Chip data3.71□□□□□ -1.82not detected
PEF1YGR058W CNS1P33313 385 aa3.71□□□□□ -1.82
PEF1YGR058W YKL050CP35736 922 aa3.71□□□□□ -1.82
PEF1YGR058W YBR139WP38109 508 aa3.71□□□□□ -1.82
PEF1YGR058W UME6P39001 836 aa3.71□□□□□ -1.82
PEF1YGR058W UIP3P39547 235 aa3.71□□□□□ -1.82
PEF1YGR058W ROK1P45818 564 aaPredicted RBP3.71□□□□□ -1.82
PEF1YGR058W TDA7P53882 636 aaPredicted RBP3.71□□□□□ -1.82
PEF1YGR058W ZDS2P54786 942 aa3.71□□□□□ -1.82
PEF1YGR058W VID22Q05934 901 aa3.71□□□□□ -1.82
PEF1YGR058W NUS1Q12063 375 aa3.71□□□□□ -1.82
PEF1YGR058W TY4B-HP0C2J7 1802 aa3.71□□□□□ -1.82
PEF1YGR058W TY4B-JP47024 1803 aa3.71□□□□□ -1.82
PEF1YGR058W ADE6P38972 1358 aaKnown RBP3.71□□□□□ -1.82
PEF1YGR058W SNF3P10870 884 aa3.7□□□□□ -1.82
PEF1YGR058W ACH1P32316 526 aa3.7□□□□□ -1.82
PEF1YGR058W LOS1P33418 1100 aaPredicted RBP3.7□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms