RNA–Protein interactions for RNA: YFL002C

SPB4, Transcript of Putative ATP-dependent RNA helicase, yeast

Gene SPB4, Length 1,821 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPB4	YFL002C	YLL066C	Q99208	1374 aa		4.13	□□□□□ -1.75
SPB4	YFL002C	YML002W	P0CF17	737 aa		4.13	□□□□□ -1.75
SPB4	YFL002C	IDH2	P28241	369 aa	Known RBP	4.13	□□□□□ -1.75
SPB4	YFL002C	GYP6	P32806	458 aa		4.13	□□□□□ -1.75
SPB4	YFL002C	SUL1	P38359	859 aa		4.13	□□□□□ -1.75
SPB4	YFL002C	NCS2	P53923	493 aa	Predicted RBP	4.13	□□□□□ -1.75
SPB4	YFL002C	VTI1	Q04338	217 aa		4.13	□□□□□ -1.75
SPB4	YFL002C	HEL2	Q05580	639 aa	Known RBP	4.13	□□□□□ -1.75
SPB4	YFL002C	UAF30	Q08747	228 aa		4.13	□□□□□ -1.75
SPB4	YFL002C	YDL007C-A	Q2V2Q0	85 aa		4.13	□□□□□ -1.75
SPB4	YFL002C	SPE2	P21182	396 aa		4.12	□□□□□ -1.75
SPB4	YFL002C	SPB1	P25582	841 aa	Predicted RBP	4.12	□□□□□ -1.75
SPB4	YFL002C	MSP1	P28737	362 aa		4.12	□□□□□ -1.75
SPB4	YFL002C	GSH1	P32477	678 aa		4.12	□□□□□ -1.75
SPB4	YFL002C	YME1	P32795	747 aa		4.12	□□□□□ -1.75
SPB4	YFL002C	DEF1	P35732	738 aa	Known RBP	4.12	□□□□□ -1.75
SPB4	YFL002C	GLG1	P36143	616 aa		4.12	□□□□□ -1.75
SPB4	YFL002C	ADE17	P38009	592 aa	Known RBP	4.12	□□□□□ -1.75
SPB4	YFL002C	THI2	P38141	450 aa		4.12	□□□□□ -1.75
SPB4	YFL002C	CBR1	P38626	284 aa	Known RBP	4.12	□□□□□ -1.75
SPB4	YFL002C	GND1	P38720	489 aa	Known RBP	4.12	□□□□□ -1.75
SPB4	YFL002C	NAS2	P40555	220 aa		4.12	□□□□□ -1.75
SPB4	YFL002C	YFR020W	P43600	232 aa		4.12	□□□□□ -1.75
SPB4	YFL002C	SMC3	P47037	1230 aa		4.12	□□□□□ -1.75
SPB4	YFL002C	PRP43	P53131	767 aa	Known RBP	4.12	□□□□□ -1.75
SPB4	YFL002C	AAT1	Q01802	451 aa		4.12	□□□□□ -1.75
SPB4	YFL002C	WAR1	Q03631	944 aa		4.12	□□□□□ -1.75
SPB4	YFL002C	PDS5	Q04264	1277 aa		4.12	□□□□□ -1.75
SPB4	YFL002C	HRD3	Q05787	833 aa		4.12	□□□□□ -1.75
SPB4	YFL002C	YLR456W	Q06199	204 aa		4.12	□□□□□ -1.75
SPB4	YFL002C	RRP9	Q06506	573 aa	Known RBP	4.12	□□□□□ -1.75
SPB4	YFL002C	RTT109	Q07794	436 aa		4.12	□□□□□ -1.75
SPB4	YFL002C	ETT1	Q08421	412 aa	Known RBP	4.12	□□□□□ -1.75
SPB4	YFL002C	PCL8	Q08966	492 aa		4.12	□□□□□ -1.75
SPB4	YFL002C	PET111	P08468	800 aa		4.11	□□□□□ -1.75
SPB4	YFL002C	PTC6	P25646	442 aa		4.11	□□□□□ -1.75
SPB4	YFL002C	TUL1	P36096	758 aa		4.11	□□□□□ -1.75
SPB4	YFL002C	PIM1	P36775	1133 aa		4.11	□□□□□ -1.75
SPB4	YFL002C	SLM4	P38247	162 aa		4.11	□□□□□ -1.75
SPB4	YFL002C	MSR1	P38714	643 aa		4.11	□□□□□ -1.75
SPB4	YFL002C	ATF1	P40353	525 aa		4.11	□□□□□ -1.75
SPB4	YFL002C	PTR3	P43606	678 aa		4.11	□□□□□ -1.75
SPB4	YFL002C	YNL144C	P53907	740 aa		4.11	□□□□□ -1.75
SPB4	YFL002C	TAP42	Q04372	366 aa		4.11	□□□□□ -1.75
SPB4	YFL002C	FRE3	Q08905	711 aa		4.11	□□□□□ -1.75
SPB4	YFL002C	LEA1	Q08963	238 aa	Predicted RBP	4.11	□□□□□ -1.75
SPB4	YFL002C	CFT2	Q12102	859 aa	Predicted RBP	4.11	□□□□□ -1.75
SPB4	YFL002C	HIP1	P06775	603 aa		4.11	□□□□□ -1.75
SPB4	YFL002C	PPH22	P23595	377 aa		4.11	□□□□□ -1.75
SPB4	YFL002C	BOS1	P25385	244 aa		4.11	□□□□□ -1.75
SPB4	YFL002C	YBL055C	P34220	418 aa	Predicted RBP	4.11	□□□□□ -1.75
SPB4	YFL002C	NUP133	P36161	1157 aa		4.11	□□□□□ -1.75
SPB4	YFL002C	ICS2	P38284	255 aa		4.11	□□□□□ -1.75
SPB4	YFL002C	PCL5	P38794	229 aa		4.11	□□□□□ -1.75
SPB4	YFL002C	FET5	P43561	622 aa		4.11	□□□□□ -1.75
SPB4	YFL002C	NET1	P47035	1189 aa		4.11	□□□□□ -1.75
SPB4	YFL002C	MLC1	P53141	149 aa		4.11	□□□□□ -1.75
SPB4	YFL002C	YOL073C	Q08232	322 aa		4.11	□□□□□ -1.75
SPB4	YFL002C	YOL159C	Q08300	171 aa		4.11	□□□□□ -1.75
SPB4	YFL002C	VPS54	Q12071	889 aa		4.11	□□□□□ -1.75
SPB4	YFL002C	MDM20	Q12387	796 aa	Known RBP	4.11	□□□□□ -1.75
SPB4	YFL002C	AHA1	Q12449	350 aa	Known RBP	4.11	□□□□□ -1.75
SPB4	YFL002C	TY1B-A	O13527	1196 aa	Known RBP	4.1	□□□□□ -1.75
SPB4	YFL002C	ILV2	P07342	687 aa	Known RBP	4.1	□□□□□ -1.75
SPB4	YFL002C	PHO84	P25297	587 aa	Known RBP	4.1	□□□□□ -1.75
SPB4	YFL002C	YEL043W	P32618	956 aa		4.1	□□□□□ -1.75
SPB4	YFL002C	THI80	P35202	319 aa		4.1	□□□□□ -1.75
SPB4	YFL002C	YMC2	P38087	329 aa		4.1	□□□□□ -1.75
SPB4	YFL002C	NTC20	P38302	140 aa	Predicted RBP	4.1	□□□□□ -1.75
SPB4	YFL002C	TSC10	P38342	320 aa		4.1	□□□□□ -1.75
SPB4	YFL002C	MUP3	P38734	546 aa		4.1	□□□□□ -1.75
SPB4	YFL002C	YHL017W	P38745	532 aa		4.1	□□□□□ -1.75
SPB4	YFL002C	MIT1	P40002	666 aa		4.1	□□□□□ -1.75
SPB4	YFL002C	RPS0B	P46654	252 aa	Known RBP	4.1	□□□□□ -1.75
SPB4	YFL002C	COS5	P47187	383 aa		4.1	□□□□□ -1.75
SPB4	YFL002C	YGL138C	P53122	345 aa		4.1	□□□□□ -1.75
SPB4	YFL002C	YGL117W	P53133	265 aa		4.1	□□□□□ -1.75
SPB4	YFL002C	SKO1	Q02100	647 aa		4.1	□□□□□ -1.75
SPB4	YFL002C	RRP45	Q05636	305 aa	Known RBP	4.1	□□□□□ -1.75
SPB4	YFL002C	COS7	Q07788	383 aa		4.1	□□□□□ -1.75
SPB4	YFL002C	PSY3	Q12318	242 aa		4.1	□□□□□ -1.75
SPB4	YFL002C	LPD1	P09624	499 aa	Known RBP	4.09	□□□□□ -1.75
SPB4	YFL002C	RPL31B	P0C2H9	113 aa	Known RBP	4.09	□□□□□ -1.75
SPB4	YFL002C	HCM1	P25364	564 aa		4.09	□□□□□ -1.75
SPB4	YFL002C	YSW1	P38280	609 aa		4.09	□□□□□ -1.75
SPB4	YFL002C	YFL015C	P43578	164 aa		4.09	□□□□□ -1.75
SPB4	YFL002C	STU2	P46675	888 aa		4.09	□□□□□ -1.75
SPB4	YFL002C	URB2	P47108	1174 aa		4.09	□□□□□ -1.75
SPB4	YFL002C	YGR149W	P48236	432 aa		4.09	□□□□□ -1.75
SPB4	YFL002C	FMS1	P50264	508 aa		4.09	□□□□□ -1.75
SPB4	YFL002C	CPR8	P53728	308 aa		4.09	□□□□□ -1.75
SPB4	YFL002C	TEN1	Q07921	160 aa		4.09	□□□□□ -1.75
SPB4	YFL002C	APL4	Q12028	832 aa		4.09	□□□□□ -1.75
SPB4	YFL002C	RPL6B	P05739	176 aa	Known RBP	4.09	□□□□□ -1.76
SPB4	YFL002C	ELO2	P25358	347 aa		4.09	□□□□□ -1.76
SPB4	YFL002C	YJU2	P28320	278 aa	Predicted RBP	4.09	□□□□□ -1.76
SPB4	YFL002C	ADH5	P38113	351 aa	Known RBP	4.09	□□□□□ -1.76
SPB4	YFL002C	BDH2	P39713	417 aa		4.09	□□□□□ -1.76
SPB4	YFL002C	TIF4631	P39935	952 aa	Known RBP	4.09	□□□□□ -1.76
SPB4	YFL002C	SER3	P40054	469 aa		4.09	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms