RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEG1YFL001W TY2B-OR2Q12501 1770 aa4.91□□□□□ -1.62
DEG1YFL001W MDH1P17505 334 aaKnown RBP RIP-Chip data4.91□□□□□ -1.62not detected
DEG1YFL001W CLC1P17891 233 aa4.91□□□□□ -1.62
DEG1YFL001W ART10P18634 518 aaKnown RBP4.91□□□□□ -1.62
DEG1YFL001W CDC43P18898 376 aa4.91□□□□□ -1.62
DEG1YFL001W APN1P22936 367 aa4.91□□□□□ -1.62
DEG1YFL001W MNE1P24720 663 aa4.91□□□□□ -1.62
DEG1YFL001W ANP1P32629 500 aa4.91□□□□□ -1.62
DEG1YFL001W RPS0AP32905 252 aaKnown RBP4.91□□□□□ -1.62
DEG1YFL001W SEC3P33332 1336 aaKnown RBP4.91□□□□□ -1.62
DEG1YFL001W NUP133P36161 1157 aa4.91□□□□□ -1.62
DEG1YFL001W APE3P37302 537 aaKnown RBP4.91□□□□□ -1.62
DEG1YFL001W SPP41P38904 1435 aa4.91□□□□□ -1.62
DEG1YFL001W ZIM17P42844 174 aa4.91□□□□□ -1.62
DEG1YFL001W BUD27P43573 796 aaKnown RBP RIP-Chip data4.91□□□□□ -1.62not detected
DEG1YFL001W YPR003CP53394 754 aa4.91□□□□□ -1.62
DEG1YFL001W YNL058CP53947 316 aa4.91□□□□□ -1.62
DEG1YFL001W ROY1Q04847 553 aa4.91□□□□□ -1.62
DEG1YFL001W VTA1Q06263 330 aa4.91□□□□□ -1.62
DEG1YFL001W IRC3Q06683 689 aa4.91□□□□□ -1.62
DEG1YFL001W YOL159CQ08300 171 aa4.91□□□□□ -1.62
DEG1YFL001W PDH1Q12428 516 aaKnown RBP4.91□□□□□ -1.62
DEG1YFL001W MYO4P32492 1471 aa4.9□□□□□ -1.63
DEG1YFL001W HEM1P09950 548 aaPredicted RBP4.9□□□□□ -1.63
DEG1YFL001W KRS1P15180 591 aaKnown RBP4.9□□□□□ -1.63
DEG1YFL001W SPE2P21182 396 aa4.9□□□□□ -1.63
DEG1YFL001W CPR2P23285 205 aa4.9□□□□□ -1.63
DEG1YFL001W SAT4P25333 603 aaKnown RBP4.9□□□□□ -1.63
DEG1YFL001W SNT1P25357 1226 aa4.9□□□□□ -1.63
DEG1YFL001W AAD3P25612 363 aa4.9□□□□□ -1.63
DEG1YFL001W IMG1P25626 169 aa4.9□□□□□ -1.63
DEG1YFL001W DPH2P32461 534 aa4.9□□□□□ -1.63
DEG1YFL001W UGP1P32861 499 aaKnown RBP4.9□□□□□ -1.63
DEG1YFL001W GDI1P39958 451 aaKnown RBP4.9□□□□□ -1.63
DEG1YFL001W LCB2P40970 561 aa4.9□□□□□ -1.63
DEG1YFL001W CDC1P40986 491 aa4.9□□□□□ -1.63
DEG1YFL001W VMA13P41807 478 aaKnown RBP4.9□□□□□ -1.63
DEG1YFL001W TCB2P48231 1178 aa4.9□□□□□ -1.63
DEG1YFL001W OAZ1Q02803 292 aa4.9□□□□□ -1.63
DEG1YFL001W SOV1Q04748 898 aa4.9□□□□□ -1.63
DEG1YFL001W RBS1Q05672 457 aaKnown RBP4.9□□□□□ -1.63
DEG1YFL001W ARO10Q06408 635 aa4.9□□□□□ -1.63
DEG1YFL001W THI3Q07471 609 aa4.9□□□□□ -1.63
DEG1YFL001W AFI1Q99222 893 aa4.9□□□□□ -1.63
DEG1YFL001W TRM732Q03496 1420 aa4.89□□□□□ -1.63
DEG1YFL001W CHO1P08456 276 aa4.89□□□□□ -1.63
DEG1YFL001W MRP2P10663 115 aaPredicted RBP4.89□□□□□ -1.63
DEG1YFL001W PUP2P32379 260 aa4.89□□□□□ -1.63
DEG1YFL001W EMP70P32802 667 aa4.89□□□□□ -1.63
DEG1YFL001W RPC34P32910 317 aa4.89□□□□□ -1.63
DEG1YFL001W YBL055CP34220 418 aaPredicted RBP4.89□□□□□ -1.63
DEG1YFL001W TSC10P38342 320 aa4.89□□□□□ -1.63
DEG1YFL001W SEC28P40509 296 aaKnown RBP4.89□□□□□ -1.63
DEG1YFL001W SAE2P46946 345 aa4.89□□□□□ -1.63
DEG1YFL001W FMP45Q07651 309 aa4.89□□□□□ -1.63
DEG1YFL001W APL4Q12028 832 aa4.89□□□□□ -1.63
DEG1YFL001W ULA1Q12059 462 aa4.89□□□□□ -1.63
DEG1YFL001W MRH1Q12117 320 aaPredicted RBP4.89□□□□□ -1.63
DEG1YFL001W MAK32P23060 363 aa4.88□□□□□ -1.63
DEG1YFL001W BOS1P25385 244 aa4.88□□□□□ -1.63
DEG1YFL001W KRR1P25586 316 aaPredicted RBP4.88□□□□□ -1.63
DEG1YFL001W GSY2P27472 705 aa4.88□□□□□ -1.63
DEG1YFL001W ERV1P27882 189 aa4.88□□□□□ -1.63
DEG1YFL001W HXT3P32466 567 aaKnown RBP4.88□□□□□ -1.63
DEG1YFL001W YKL100CP34248 587 aa4.88□□□□□ -1.63
DEG1YFL001W PTR3P43606 678 aa4.88□□□□□ -1.63
DEG1YFL001W STB2P46679 850 aa4.88□□□□□ -1.63
DEG1YFL001W YJL055WP47044 245 aa4.88□□□□□ -1.63
DEG1YFL001W MEH1Q02205 184 aa4.88□□□□□ -1.63
DEG1YFL001W KAP120Q02932 1032 aa4.88□□□□□ -1.63
DEG1YFL001W YMR178WQ03219 274 aaKnown RBP4.88□□□□□ -1.63
DEG1YFL001W YLR455WQ06188 304 aa4.88□□□□□ -1.63
DEG1YFL001W TEN1Q07921 160 aa4.88□□□□□ -1.63
DEG1YFL001W YDL007C-AQ2V2Q0 85 aa4.88□□□□□ -1.63
DEG1YFL001W TSC11P40061 1430 aa4.87□□□□□ -1.63
DEG1YFL001W MET5P47169 1442 aa4.87□□□□□ -1.63
DEG1YFL001W STH1P32597 1359 aa4.87□□□□□ -1.63
DEG1YFL001W AQY1P0CD91 305 aa4.87□□□□□ -1.63
DEG1YFL001W BUD5P25300 642 aaPredicted RBP4.87□□□□□ -1.63
DEG1YFL001W YMC1P32331 307 aa4.87□□□□□ -1.63
DEG1YFL001W OAR1P35731 278 aa4.87□□□□□ -1.63
DEG1YFL001W MOH1P38191 138 aa4.87□□□□□ -1.63
DEG1YFL001W ICS2P38284 255 aa4.87□□□□□ -1.63
DEG1YFL001W MSR1P38714 643 aa4.87□□□□□ -1.63
DEG1YFL001W CAK1P43568 368 aaPredicted RBP4.87□□□□□ -1.63
DEG1YFL001W MRK1P50873 501 aa4.87□□□□□ -1.63
DEG1YFL001W ERG26P53199 349 aaKnown RBP4.87□□□□□ -1.63
DEG1YFL001W GND2P53319 492 aa4.87□□□□□ -1.63
DEG1YFL001W PEX25Q02969 394 aa4.87□□□□□ -1.63
DEG1YFL001W MSC1Q03104 513 aa4.87□□□□□ -1.63
DEG1YFL001W GYL1Q04322 720 aa4.87□□□□□ -1.63
DEG1YFL001W TY1B-BRQ12193 1756 aa4.87□□□□□ -1.63
DEG1YFL001W TY1B-GR3Q12316 1755 aa4.87□□□□□ -1.63
DEG1YFL001W TY2B-BQ12491 1770 aa4.87□□□□□ -1.63
DEG1YFL001W TY1B-ORQ92393 1755 aa4.87□□□□□ -1.63
DEG1YFL001W YML133CQ03099 1374 aa4.86□□□□□ -1.63
DEG1YFL001W YLL067CQ07888 1374 aa4.86□□□□□ -1.63
DEG1YFL001W YLL066CQ99208 1374 aa4.86□□□□□ -1.63
DEG1YFL001W RPN13O13563 156 aa4.86□□□□□ -1.63
DEG1YFL001W RAP1P11938 827 aa4.86□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms