RNA–Protein interactions for RNA: YDR504C

SPG3, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG3, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG3YDR504C LCB1P25045 558 aaKnown RBP1.3□□□□□ -2.2
SPG3YDR504C OSH3P38713 996 aaKnown RBP1.3□□□□□ -2.2
SPG3YDR504C IMA1P53051 589 aa1.3□□□□□ -2.2
SPG3YDR504C STR3P53101 465 aaKnown RBP1.3□□□□□ -2.2
SPG3YDR504C YVH1Q02256 364 aaKnown RBP1.3□□□□□ -2.2
SPG3YDR504C IWR1Q07532 353 aaPredicted RBP1.3□□□□□ -2.2
SPG3YDR504C SGV1P23293 657 aaKnown RBP1.29□□□□□ -2.2
SPG3YDR504C MRP4P32902 394 aa1.29□□□□□ -2.2
SPG3YDR504C LAG1P38703 411 aa1.29□□□□□ -2.2
SPG3YDR504C HAT2P39984 401 aa1.29□□□□□ -2.2
SPG3YDR504C COG6P53959 839 aa1.29□□□□□ -2.2
SPG3YDR504C GLO2Q05584 274 aa1.29□□□□□ -2.2
SPG3YDR504C ATG9Q12142 997 aa1.29□□□□□ -2.2
SPG3YDR504C RFM1Q12192 310 aa1.29□□□□□ -2.2
SPG3YDR504C YDL009CQ12210 107 aa1.29□□□□□ -2.2
SPG3YDR504C WTM1Q12363 437 aaKnown RBP1.29□□□□□ -2.2
SPG3YDR504C LPD1P09624 499 aaKnown RBP1.28□□□□□ -2.2
SPG3YDR504C SPO16P17122 198 aa1.28□□□□□ -2.2
SPG3YDR504C TMA108P40462 946 aa1.28□□□□□ -2.2
SPG3YDR504C PKP1P40530 394 aa1.28□□□□□ -2.2
SPG3YDR504C YJR120WP47157 116 aa1.28□□□□□ -2.2
SPG3YDR504C YMR160WQ03823 816 aa1.28□□□□□ -2.2
SPG3YDR504C PIM1P36775 1133 aa1.27□□□□□ -2.21
SPG3YDR504C RPS10BP46784 105 aaKnown RBP1.27□□□□□ -2.21
SPG3YDR504C SMC3P47037 1230 aa1.27□□□□□ -2.21
SPG3YDR504C PYK2P52489 506 aaKnown RBP1.27□□□□□ -2.21
SPG3YDR504C IST1P53843 298 aaPredicted RBP1.27□□□□□ -2.21
SPG3YDR504C APL4Q12028 832 aa1.27□□□□□ -2.21
SPG3YDR504C ATP2P00830 511 aaKnown RBP1.26□□□□□ -2.21
SPG3YDR504C CHS1P08004 1131 aa1.26□□□□□ -2.21
SPG3YDR504C HSP26P15992 214 aaKnown RBP RIP-Chip data1.26□□□□□ -2.21not detected
SPG3YDR504C HEM15P16622 393 aa1.26□□□□□ -2.21
SPG3YDR504C RHO4Q00246 291 aa1.26□□□□□ -2.21
SPG3YDR504C HXK2P04807 486 aaKnown RBP1.25□□□□□ -2.21
SPG3YDR504C CPR4P25334 318 aa1.25□□□□□ -2.21
SPG3YDR504C FSH1P38777 243 aaKnown RBP1.25□□□□□ -2.21
SPG3YDR504C EIS1Q05050 843 aaKnown RBP1.25□□□□□ -2.21
SPG3YDR504C IES4Q08561 116 aa1.25□□□□□ -2.21
SPG3YDR504C ESA1Q08649 445 aa1.25□□□□□ -2.21
SPG3YDR504C RPS10AQ08745 105 aaPredicted RBP1.25□□□□□ -2.21
SPG3YDR504C MIS1P09440 975 aaKnown RBP1.24□□□□□ -2.21
SPG3YDR504C SRB5P32585 307 aa1.24□□□□□ -2.21
SPG3YDR504C FRE1P32791 686 aa1.24□□□□□ -2.21
SPG3YDR504C YFL067WP43537 175 aa1.24□□□□□ -2.21
SPG3YDR504C BNA5Q05979 453 aa1.24□□□□□ -2.21
SPG3YDR504C MRPL51Q06090 140 aaPredicted RBP1.24□□□□□ -2.21
SPG3YDR504C TSR1Q07381 788 aaKnown RBP1.24□□□□□ -2.21
SPG3YDR504C TMA17Q12513 150 aa1.24□□□□□ -2.21
SPG3YDR504C PUT2P07275 575 aa1.23□□□□□ -2.21
SPG3YDR504C YBR138CP38277 524 aa1.23□□□□□ -2.21
SPG3YDR504C SMM1P53720 384 aaKnown RBP1.23□□□□□ -2.21
SPG3YDR504C HIP1P06775 603 aa1.22□□□□□ -2.21
SPG3YDR504C PRB1P09232 635 aa1.22□□□□□ -2.21
SPG3YDR504C PET123P17558 318 aa1.22□□□□□ -2.21
SPG3YDR504C NUP120P35729 1037 aa1.22□□□□□ -2.21
SPG3YDR504C YKL050CP35736 922 aa1.22□□□□□ -2.21
SPG3YDR504C UBP12P39538 1254 aa1.22□□□□□ -2.21
SPG3YDR504C FMP10P40098 244 aa1.22□□□□□ -2.21
SPG3YDR504C SCD6P45978 349 aaKnown RBP RIP-Chip data1.22□□□□□ -2.21not detected
SPG3YDR504C DPB11P47027 764 aaPredicted RBP1.22□□□□□ -2.21
SPG3YDR504C ZDS2P54786 942 aa1.22□□□□□ -2.21
SPG3YDR504C EMI2Q04409 500 aaKnown RBP1.22□□□□□ -2.21
SPG3YDR504C APM3P38153 483 aa1.21□□□□□ -2.22
SPG3YDR504C PEX14P53112 341 aa1.21□□□□□ -2.22
SPG3YDR504C TOF1P53840 1238 aa1.21□□□□□ -2.22
SPG3YDR504C RPC11Q04307 110 aaPredicted RBP1.21□□□□□ -2.22
SPG3YDR504C TMA16Q08687 178 aa1.21□□□□□ -2.22
SPG3YDR504C TFC3P34111 1160 aa1.2□□□□□ -2.22
SPG3YDR504C CPR6P53691 371 aaKnown RBP1.2□□□□□ -2.22
SPG3YDR504C HRI1Q05905 244 aaKnown RBP1.2□□□□□ -2.22
SPG3YDR504C YPR091CQ06833 770 aa1.2□□□□□ -2.22
SPG3YDR504C INP53Q12271 1107 aa1.2□□□□□ -2.22
SPG3YDR504C YOL114CQ12322 202 aa1.2□□□□□ -2.22
SPG3YDR504C PRM7Q12459 698 aa1.2□□□□□ -2.22
SPG3YDR504C ARG81P05085 880 aa1.19□□□□□ -2.22
SPG3YDR504C SEF1P34228 1148 aa1.19□□□□□ -2.22
SPG3YDR504C SNU114P36048 1008 aaKnown RBP1.19□□□□□ -2.22
SPG3YDR504C VID24P38263 362 aa1.19□□□□□ -2.22
SPG3YDR504C ASE1P50275 885 aa1.19□□□□□ -2.22
SPG3YDR504C TRS130Q03660 1102 aa1.19□□□□□ -2.22
SPG3YDR504C MLC2Q06580 163 aa1.19□□□□□ -2.22
SPG3YDR504C SDH3P33421 198 aa1.18□□□□□ -2.22
SPG3YDR504C DBP8P38719 431 aa1.18□□□□□ -2.22
SPG3YDR504C PAN6P40459 309 aa1.18□□□□□ -2.22
SPG3YDR504C TEP1P53916 434 aa1.18□□□□□ -2.22
SPG3YDR504C IRC15Q02733 499 aa1.18□□□□□ -2.22
SPG3YDR504C PIR3Q03180 325 aa1.18□□□□□ -2.22
SPG3YDR504C SLD5Q03406 294 aa1.18□□□□□ -2.22
SPG3YDR504C THP3Q12049 470 aaKnown RBP1.18□□□□□ -2.22
SPG3YDR504C SPE2P21182 396 aa1.17□□□□□ -2.22
SPG3YDR504C KTR3P38130 404 aaPredicted RBP1.17□□□□□ -2.22
SPG3YDR504C SPC72P39723 622 aa1.17□□□□□ -2.22
SPG3YDR504C CHS6P40955 746 aa1.17□□□□□ -2.22
SPG3YDR504C GWT1P47026 490 aa1.17□□□□□ -2.22
SPG3YDR504C BUD32P53323 261 aa1.17□□□□□ -2.22
SPG3YDR504C HST1P53685 503 aa1.17□□□□□ -2.22
SPG3YDR504C CSL4P53859 292 aaPredicted RBP1.17□□□□□ -2.22
SPG3YDR504C RSM23Q01163 450 aa1.17□□□□□ -2.22
SPG3YDR504C RSN1Q03516 953 aa1.17□□□□□ -2.22
SPG3YDR504C VPS74Q06385 345 aa1.17□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms